hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-12410119/chunk_1/iprscan-20090618-12410119.nocrc
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Query sequence: fk09741
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00295                                                 275.0    5.9e-78   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00295    1/1     217   412 ..     1   232 []   275.0  5.9e-78

Alignments of top-scoring domains:
SM00295: domain 1 of 1, from 217 to 412: score 275.0, E = 5.9e-78
                   *->spkprvlkVylldgttlefevdssttaeelletvcrklglspresey
                      + k++ +kV+lldgt +++ +++++++++l+++vc++l+l  +e++y
     fk09741   217    KTKTVQCKVTLLDGTEYSCDLEKHAKGQVLFDKVCEHLNL--LEKDY 261  

                   FgLqfedkdedshWldpaktilkqdvkspksepltlyFRvkFyppdwhgp
                   FgL f    e++ Wldpak+i++q ++    +p+ + F vkFyppd    
     fk09741   262 FGLLFQESPEQKNWLDPAKEIKRQLRN----LPWLFTFNVKFYPPD---- 303  

                   peqlkeDptrynllylQvrddilsGrlpcpseeeallLAaLalqaefGdy
                   p+ql+eD+try +l+lQ+r+di sGrlpc+ + +++lL+++ lqae+Gdy
     fk09741   304 PSQLTEDITRY-FLCLQLRQDIASGRLPCS-FVTHALLGSYTLQAELGDY 351  

                   dpeeeekkkslkhvakelslkrflPkqlldsikasflqiqltlkewrerI
                   dpe        +h +++ls+++f P q               +ke++e++
     fk09741   352 DPE--------EHGSIDLSEFQFAPTQ---------------TKELEEKV 378  

                   velhkehaglspeeaklkYLelarrLpptYGvelF<-*
                   +elhk h+glsp++a+ ++Le+a+rL  +YGv+l+   
     fk09741   379 AELHKTHRGLSPAQADSQFLENAKRLS-MYGVDLH    412  

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