# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofk09872.fasta.nr -Q fk09872.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fk09872, 280 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6842381 sequences Expectation_n fit: rho(ln(x))= 4.3375+/-0.000186; mu= 12.8858+/- 0.010 mean_var=63.1354+/-12.736, 0's: 26 Z-trim: 30 B-trim: 4690 in 2/65 Lambda= 0.161413 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62088630|dbj|BAD92762.1| glycoprotein M6B isofo ( 280) 1899 450.6 1.2e-124 gi|55733649|emb|CAH93501.1| hypothetical protein [ ( 269) 1818 431.7 5.6e-119 gi|119619248|gb|EAW98842.1| glycoprotein M6B, isof ( 309) 1818 431.8 6.1e-119 gi|21754964|dbj|BAC04600.1| unnamed protein produc ( 328) 1818 431.8 6.4e-119 gi|55729342|emb|CAH91404.1| hypothetical protein [ ( 328) 1812 430.4 1.7e-118 gi|119619250|gb|EAW98844.1| glycoprotein M6B, isof ( 288) 1811 430.1 1.8e-118 gi|55729321|emb|CAH91395.1| hypothetical protein [ ( 288) 1808 429.4 2.9e-118 gi|149744251|ref|XP_001489311.1| PREDICTED: glycop ( 328) 1808 429.5 3.2e-118 gi|9502123|gb|AAF87989.1|AF254871_1 proteolipid M6 ( 269) 1806 428.9 3.9e-118 gi|123121340|emb|CAM18330.1| glycoprotein m6b [Mus ( 328) 1801 427.9 1e-117 gi|194044770|ref|XP_001927851.1| PREDICTED: simila ( 328) 1801 427.9 1e-117 gi|12855370|dbj|BAB30309.1| unnamed protein produc ( 269) 1800 427.5 1e-117 gi|30316333|sp|P35803|GPM6B_MOUSE Neuronal membran ( 328) 1800 427.6 1.2e-117 gi|2143496|pir||I78556 membrane glycoprotein M6 - ( 288) 1799 427.3 1.3e-117 gi|149035876|gb|EDL90543.1| rCG49687, isoform CRA_ ( 292) 1799 427.3 1.3e-117 gi|126337025|ref|XP_001381041.1| PREDICTED: hypoth ( 343) 1735 412.5 4.3e-113 gi|58802956|gb|AAW82624.1| proteolipid GPM6B [Gall ( 269) 1716 408.0 7.9e-112 gi|149638342|ref|XP_001515350.1| PREDICTED: simila ( 351) 1703 405.1 7.7e-111 gi|114107632|gb|AAI23037.1| MGC79599 protein [Xeno ( 269) 1686 401.0 1e-109 gi|49898942|gb|AAH76667.1| MGC79599 protein [Xenop ( 288) 1679 399.4 3.2e-109 gi|50604070|gb|AAH77253.1| LOC398217 protein [Xeno ( 269) 1654 393.5 1.7e-107 gi|13274456|gb|AAK17943.1|AF329364_1 myelin PLP-re ( 269) 1649 392.4 3.9e-107 gi|1263036|gb|AAB16888.1| M6b [Homo sapiens] g ( 283) 1623 386.4 2.7e-105 gi|148708789|gb|EDL40736.1| glycoprotein m6b, isof ( 294) 1606 382.4 4.3e-104 gi|18175552|gb|AAL59893.1| DMgamma2 [Danio rerio] ( 268) 1556 370.7 1.3e-100 gi|60477759|gb|AAH90796.1| Glycoprotein M6Bb [Dani ( 268) 1550 369.3 3.4e-100 gi|55727022|emb|CAH90268.1| hypothetical protein [ ( 246) 1542 367.4 1.2e-99 gi|119619256|gb|EAW98850.1| glycoprotein M6B, isof ( 286) 1542 367.5 1.3e-99 gi|117644500|emb|CAL37745.1| hypothetical protein ( 301) 1542 367.5 1.3e-99 gi|28703833|gb|AAH47295.1| Glycoprotein M6B [Homo ( 305) 1542 367.5 1.4e-99 gi|117646356|emb|CAL38645.1| hypothetical protein ( 301) 1536 366.1 3.5e-99 gi|55732372|emb|CAH92888.1| hypothetical protein [ ( 246) 1535 365.8 3.6e-99 gi|117644276|emb|CAL37632.1| hypothetical protein ( 261) 1535 365.8 3.8e-99 gi|20141466|sp|Q13491|GPM6B_HUMAN Neuronal membran ( 265) 1535 365.8 3.8e-99 gi|117646580|emb|CAL37405.1| hypothetical protein ( 301) 1534 365.7 4.9e-99 gi|117646460|emb|CAL38697.1| hypothetical protein ( 301) 1533 365.4 5.7e-99 gi|149744253|ref|XP_001489238.1| PREDICTED: glycop ( 305) 1532 365.2 6.8e-99 gi|117644494|emb|CAL37742.1| hypothetical protein ( 246) 1531 364.9 6.9e-99 gi|74007127|ref|XP_537959.2| PREDICTED: similar to ( 325) 1532 365.2 7.1e-99 gi|9502133|gb|AAF87994.1|AF254876_1 proteolipid M6 ( 246) 1530 364.6 8.1e-99 gi|117644760|emb|CAL37846.1| hypothetical protein ( 261) 1529 364.4 9.9e-99 gi|149744255|ref|XP_001489262.1| PREDICTED: glycop ( 265) 1525 363.5 1.9e-98 gi|194044768|ref|XP_001927891.1| PREDICTED: simila ( 305) 1525 363.6 2.1e-98 gi|123121337|emb|CAM18327.1| glycoprotein m6b [Mus ( 305) 1525 363.6 2.1e-98 gi|9502129|gb|AAF87992.1|AF254874_1 proteolipid M6 ( 305) 1524 363.3 2.5e-98 gi|8926937|dbj|BAA98020.1| Rhombex-29 [Rattus norv ( 265) 1523 363.0 2.6e-98 gi|9502125|gb|AAF87990.1|AF254872_1 proteolipid M6 ( 265) 1523 363.0 2.6e-98 gi|75041184|sp|Q5R603.1|GPM6B_PONAB Neuronal membr ( 265) 1523 363.0 2.6e-98 gi|154425729|gb|AAI51439.1| GPM6B protein [Bos tau ( 265) 1522 362.8 3.1e-98 gi|194044772|ref|XP_001927900.1| PREDICTED: simila ( 265) 1518 361.9 5.9e-98 >>gi|62088630|dbj|BAD92762.1| glycoprotein M6B isoform 1 (280 aa) initn: 1899 init1: 1899 opt: 1899 Z-score: 2393.0 bits: 450.6 E(): 1.2e-124 Smith-Waterman score: 1899; 100.000% identity (100.000% similar) in 280 aa overlap (1-280:1-280) 10 20 30 40 50 60 fk0987 RSPHPSRQSPAMGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RSPHPSRQSPAMGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQ 10 20 30 40 50 60 70 80 90 100 110 120 fk0987 HFSTNASDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 HFSTNASDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTAC 70 80 90 100 110 120 130 140 150 160 170 180 fk0987 GRCISGMFVFLTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GRCISGMFVFLTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVD 130 140 150 160 170 180 190 200 210 220 230 240 fk0987 IRQYGIIPWNAFPGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 IRQYGIIPWNAFPGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSS 190 200 210 220 230 240 250 260 270 280 fk0987 NWAYLKDASKMQAYQDIKAKEEQELQDIQSRSKEQLNSYT :::::::::::::::::::::::::::::::::::::::: gi|620 NWAYLKDASKMQAYQDIKAKEEQELQDIQSRSKEQLNSYT 250 260 270 280 >>gi|55733649|emb|CAH93501.1| hypothetical protein [Pong (269 aa) initn: 1818 init1: 1818 opt: 1818 Z-score: 2291.2 bits: 431.7 E(): 5.6e-119 Smith-Waterman score: 1818; 100.000% identity (100.000% similar) in 269 aa overlap (12-280:1-269) 10 20 30 40 50 60 fk0987 RSPHPSRQSPAMGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQ ::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 MGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQ 10 20 30 40 70 80 90 100 110 120 fk0987 HFSTNASDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTAC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 HFSTNASDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTAC 50 60 70 80 90 100 130 140 150 160 170 180 fk0987 GRCISGMFVFLTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 GRCISGMFVFLTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVD 110 120 130 140 150 160 190 200 210 220 230 240 fk0987 IRQYGIIPWNAFPGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 IRQYGIIPWNAFPGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSS 170 180 190 200 210 220 250 260 270 280 fk0987 NWAYLKDASKMQAYQDIKAKEEQELQDIQSRSKEQLNSYT :::::::::::::::::::::::::::::::::::::::: gi|557 NWAYLKDASKMQAYQDIKAKEEQELQDIQSRSKEQLNSYT 230 240 250 260 >>gi|119619248|gb|EAW98842.1| glycoprotein M6B, isoform (309 aa) initn: 1811 init1: 1811 opt: 1818 Z-score: 2290.5 bits: 431.8 E(): 6.1e-119 Smith-Waterman score: 1818; 96.466% identity (97.173% similar) in 283 aa overlap (3-280:27-309) 10 20 30 fk0987 RSPHPS---RQSP--AMGCFECCIKCLGGVPYASLV : :. : :: . ::::::::::::::::::: gi|119 MVNSRAEMEIGRYHWMYPGSKNHQYHPVPTLGDRASPLSSPGCFECCIKCLGGVPYASLV 10 20 30 40 50 60 40 50 60 70 80 90 fk0987 ATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALLSEVIQLMQYVIYGIASFFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALLSEVIQLMQYVIYGIASFFF 70 80 90 100 110 120 100 110 120 130 140 150 fk0987 LYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSAVPVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSAVPVF 130 140 150 160 170 180 160 170 180 190 200 210 fk0987 MFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAFPGKICGSALENICNTNEFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAFPGKICGSALENICNTNEFY 190 200 210 220 230 240 220 230 240 250 260 270 fk0987 MSYHLFIVACAGAGATVIALIHFLMILSSNWAYLKDASKMQAYQDIKAKEEQELQDIQSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MSYHLFIVACAGAGATVIALIHFLMILSSNWAYLKDASKMQAYQDIKAKEEQELQDIQSR 250 260 270 280 290 300 280 fk0987 SKEQLNSYT ::::::::: gi|119 SKEQLNSYT >>gi|21754964|dbj|BAC04600.1| unnamed protein product [H (328 aa) initn: 1811 init1: 1811 opt: 1818 Z-score: 2290.2 bits: 431.8 E(): 6.4e-119 Smith-Waterman score: 1818; 96.466% identity (97.173% similar) in 283 aa overlap (3-280:46-328) 10 20 fk0987 RSPHPS---RQSP--AMGCFECCIKCLGGVPY : :. : :: . ::::::::::::::: gi|217 SQERKVNSRAEMEIGRYHWMYPGSKNHQYHPVPTLGDRASPLSSPGCFECCIKCLGGVPY 20 30 40 50 60 70 30 40 50 60 70 80 fk0987 ASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALLSEVIQLMQYVIYGIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 ASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALLSEVIQLMQYVIYGIA 80 90 100 110 120 130 90 100 110 120 130 140 fk0987 SFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 SFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSA 140 150 160 170 180 190 150 160 170 180 190 200 fk0987 VPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAFPGKICGSALENICNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 VPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAFPGKICGSALENICNT 200 210 220 230 240 250 210 220 230 240 250 260 fk0987 NEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYLKDASKMQAYQDIKAKEEQELQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|217 NEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYLKDASKMQAYQDIKAKEEQELQD 260 270 280 290 300 310 270 280 fk0987 IQSRSKEQLNSYT ::::::::::::: gi|217 IQSRSKEQLNSYT 320 >>gi|55729342|emb|CAH91404.1| hypothetical protein [Pong (328 aa) initn: 1805 init1: 1805 opt: 1812 Z-score: 2282.6 bits: 430.4 E(): 1.7e-118 Smith-Waterman score: 1812; 96.113% identity (96.820% similar) in 283 aa overlap (3-280:46-328) 10 20 fk0987 RSPHPS---RQSP--AMGCFECCIKCLGGVPY : :. : :: . ::::::::::::::: gi|557 SQERKVNSRAEMEIGRYHWMYPGSKNHQYHPVPTLGDRASPLSSPGCFECCIKCLGGVPY 20 30 40 50 60 70 30 40 50 60 70 80 fk0987 ASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALLSEVIQLMQYVIYGIA ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|557 ASLVATILCFSGVALFCGCGHVALAGTVATLEQHFSTNASDHALLSEVIQLMQYVIYGIA 80 90 100 110 120 130 90 100 110 120 130 140 fk0987 SFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 SFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSA 140 150 160 170 180 190 150 160 170 180 190 200 fk0987 VPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAFPGKICGSALENICNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 VPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAFPGKICGSALENICNT 200 210 220 230 240 250 210 220 230 240 250 260 fk0987 NEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYLKDASKMQAYQDIKAKEEQELQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 NEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYLKDASKMQAYQDIKAKEEQELQD 260 270 280 290 300 310 270 280 fk0987 IQSRSKEQLNSYT ::::::::::::: gi|557 IQSRSKEQLNSYT 320 >>gi|119619250|gb|EAW98844.1| glycoprotein M6B, isoform (288 aa) initn: 1811 init1: 1811 opt: 1811 Z-score: 2282.1 bits: 430.1 E(): 1.8e-118 Smith-Waterman score: 1811; 100.000% identity (100.000% similar) in 268 aa overlap (13-280:21-288) 10 20 30 40 50 fk0987 RSPHPSRQSPAMGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALA :::::::::::::::::::::::::::::::::::::::: gi|119 MKPAMETAAEENTEQSQERKGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALA 10 20 30 40 50 60 60 70 80 90 100 110 fk0987 GTVAILEQHFSTNASDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GTVAILEQHFSTNASDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELH 70 80 90 100 110 120 120 130 140 150 160 170 fk0987 GEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTT 130 140 150 160 170 180 180 190 200 210 220 230 fk0987 GVEQICVDIRQYGIIPWNAFPGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GVEQICVDIRQYGIIPWNAFPGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALI 190 200 210 220 230 240 240 250 260 270 280 fk0987 HFLMILSSNWAYLKDASKMQAYQDIKAKEEQELQDIQSRSKEQLNSYT :::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HFLMILSSNWAYLKDASKMQAYQDIKAKEEQELQDIQSRSKEQLNSYT 250 260 270 280 >>gi|55729321|emb|CAH91395.1| hypothetical protein [Pong (288 aa) initn: 1808 init1: 1808 opt: 1808 Z-score: 2278.3 bits: 429.4 E(): 2.9e-118 Smith-Waterman score: 1808; 99.627% identity (100.000% similar) in 268 aa overlap (13-280:21-288) 10 20 30 40 50 fk0987 RSPHPSRQSPAMGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALA :::::::::::::::::::::::::::::::::::::::: gi|557 MKPAMETAAEGNTEQSQERKGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALA 10 20 30 40 50 60 60 70 80 90 100 110 fk0987 GTVAILEQHFSTNASDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELH :::::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|557 GTVAILEQHFSSNASDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELH 70 80 90 100 110 120 120 130 140 150 160 170 fk0987 GEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 GEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTT 130 140 150 160 170 180 180 190 200 210 220 230 fk0987 GVEQICVDIRQYGIIPWNAFPGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 GVEQICVDIRQYGIIPWNAFPGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALI 190 200 210 220 230 240 240 250 260 270 280 fk0987 HFLMILSSNWAYLKDASKMQAYQDIKAKEEQELQDIQSRSKEQLNSYT :::::::::::::::::::::::::::::::::::::::::::::::: gi|557 HFLMILSSNWAYLKDASKMQAYQDIKAKEEQELQDIQSRSKEQLNSYT 250 260 270 280 >>gi|149744251|ref|XP_001489311.1| PREDICTED: glycoprote (328 aa) initn: 1801 init1: 1801 opt: 1808 Z-score: 2277.6 bits: 429.5 E(): 3.2e-118 Smith-Waterman score: 1808; 95.760% identity (97.173% similar) in 283 aa overlap (3-280:46-328) 10 20 fk0987 RSPHPS---RQSP--AMGCFECCIKCLGGVPY : :. : :: . ::::::::::::::: gi|149 SQERKVNSRAEMEIGRYHWMYPGSKNHQYHPVPTLGDRASPLSSPGCFECCIKCLGGVPY 20 30 40 50 60 70 30 40 50 60 70 80 fk0987 ASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALLSEVIQLMQYVIYGIA ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|149 ASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNTSDHALLSEVIQLMQYVIYGIA 80 90 100 110 120 130 90 100 110 120 130 140 fk0987 SFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSA 140 150 160 170 180 190 150 160 170 180 190 200 fk0987 VPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAFPGKICGSALENICNT ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|149 VPVFMFYNIWSTCEVIKSPQTNGTAGVEQICVDIRQYGIIPWNAFPGKICGSALENICNT 200 210 220 230 240 250 210 220 230 240 250 260 fk0987 NEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYLKDASKMQAYQDIKAKEEQELQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYLKDASKMQAYQDIKAKEEQELQD 260 270 280 290 300 310 270 280 fk0987 IQSRSKEQLNSYT ::::::::::::: gi|149 IQSRSKEQLNSYT 320 >>gi|9502123|gb|AAF87989.1|AF254871_1 proteolipid M6B is (269 aa) initn: 1806 init1: 1806 opt: 1806 Z-score: 2276.1 bits: 428.9 E(): 3.9e-118 Smith-Waterman score: 1806; 98.513% identity (100.000% similar) in 269 aa overlap (12-280:1-269) 10 20 30 40 50 60 fk0987 RSPHPSRQSPAMGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQ ::::::::::::::::::::::::::::::::::::::::::::::::: gi|950 MGCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQ 10 20 30 40 70 80 90 100 110 120 fk0987 HFSTNASDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTAC :::::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|950 HFSTNTSDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTAC 50 60 70 80 90 100 130 140 150 160 170 180 fk0987 GRCISGMFVFLTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVD :::::::::::::::::::::::::::::::::::::::::::::::.:::.:::::::: gi|950 GRCISGMFVFLTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQSNGTSGVEQICVD 110 120 130 140 150 160 190 200 210 220 230 240 fk0987 IRQYGIIPWNAFPGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSS .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|950 VRQYGIIPWNAFPGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSS 170 180 190 200 210 220 250 260 270 280 fk0987 NWAYLKDASKMQAYQDIKAKEEQELQDIQSRSKEQLNSYT :::::::::::::::::::::::::::::::::::::::: gi|950 NWAYLKDASKMQAYQDIKAKEEQELQDIQSRSKEQLNSYT 230 240 250 260 >>gi|123121340|emb|CAM18330.1| glycoprotein m6b [Mus mus (328 aa) initn: 1799 init1: 1799 opt: 1801 Z-score: 2268.8 bits: 427.9 E(): 1e-117 Smith-Waterman score: 1801; 94.700% identity (97.173% similar) in 283 aa overlap (3-280:46-328) 10 20 fk0987 RSPHPS---RQSP--AMGCFECCIKCLGGVPY : :. : .: . ::::::::::::::: gi|123 SQERKVNSRAEMEIGRYHWMYPGSKNHQYRPVPTLGDRAGPLSSPGCFECCIKCLGGVPY 20 30 40 50 60 70 30 40 50 60 70 80 fk0987 ASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALLSEVIQLMQYVIYGIA ::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|123 ASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNTSDHALLSEVIQLMQYVIYGIA 80 90 100 110 120 130 90 100 110 120 130 140 fk0987 SFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 SFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLTYVLGVAWLGVFGFSA 140 150 160 170 180 190 150 160 170 180 190 200 fk0987 VPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAFPGKICGSALENICNT ::::::::::::::::::::.:::.::::::::.:::::::::::::::::::::::::: gi|123 VPVFMFYNIWSTCEVIKSPQSNGTSGVEQICVDVRQYGIIPWNAFPGKICGSALENICNT 200 210 220 230 240 250 210 220 230 240 250 260 fk0987 NEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYLKDASKMQAYQDIKAKEEQELQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|123 NEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYLKDASKMQAYQDIKAKEEQELQD 260 270 280 290 300 310 270 280 fk0987 IQSRSKEQLNSYT ::::::::::::: gi|123 IQSRSKEQLNSYT 320 280 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Mon Aug 11 08:15:44 2008 done: Mon Aug 11 08:18:25 2008 Total Scan time: 717.950 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]