hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-09050605/chunk_1/iprscan-20080811-09050605.nocrc
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Query sequence: fk10433
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00005                                                  40.6    2.1e-07   1
SM00369                                                  37.6    1.7e-06   2

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00369     1/2      80   102 ..     1    24 []    11.6       16
SM00369     2/2     103   126 ..     1    24 []    26.0   0.0053
SM00005     1/1     619   714 ..     1   108 []    40.6  2.1e-07

Alignments of top-scoring domains:
SM00369: domain 1 of 2, from 80 to 102: score 11.6, E = 16
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L++Lr L L++N L s+P+++ +    
     fk10433    80    LRSLRLLVLHSNLLASVPADL-AR    102  

SM00369: domain 2 of 2, from 103 to 126: score 26.0, E = 0.0053
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      Lp L++LdL +NqL+ LPp++++    
     fk10433   103    LPLLTRLDLRDNQLRDLPPELLDA    126  

SM00005: domain 1 of 1, from 619 to 714: score 40.6, E = 2.1e-07
                   *->pagaaslteltreklaklldhpldlgddWreLArkLglseaeidqie
                        g+a    lt+  l  ++ +   lg dW   A  Lg+s +e+++i+
     fk10433   619    NLGDAETGFLTQSNLLSVAGR---LGLDWPAVALHLGVSYREVQRIR 662  

                   tesprelnAyyeddlreqsyqlLrlWeqregkneqatlgtLleaLrkmgr
                   +e          ddl eq + +L  W  r+  +  +++g L++aL++  r
     fk10433   663 HEFR--------DDLDEQIRHMLFSWAERQAGQ-PGAVGLLVQALEQSDR 703  

                   ddavellrsel<-*
                    d++e++r  l   
     fk10433   704 QDVAEEVRAVL    714  

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