hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-09231909/chunk_1/iprscan-20080811-09231909.nocrc
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Query sequence: fk10515
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00132                                                 222.9    2.9e-62   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00132    1/3     259   310 ..     1    52 []    72.8  4.1e-17
SM00132    2/3     318   369 ..     1    52 []    78.9  6.4e-19
SM00132    3/3     377   430 ..     1    52 []    71.2  1.3e-16

Alignments of top-scoring domains:
SM00132: domain 1 of 3, from 259 to 310: score 72.8, E = 4.1e-17
                   *->kCagCgkpItgdevlralgkvwHpeCFkCskCkkpLgg.tffekdgk
                       Ca+C++ I+g   l+algk+wHpe F C++Ck++++  +f+e++g 
     fk10515   259    MCAHCNQVIRG-PFLVALGKSWHPEEFNCAHCKNTMAYiGFVEEKGA 304  

                   lyCkdc<-*
                   lyC+ c   
     fk10515   305 LYCELC    310  

SM00132: domain 2 of 3, from 318 to 369: score 78.9, E = 6.4e-19
                   *->kCagCgkpItgdevlralgkvwHpeCFkCskCkkpLgg.tffekdgk
                       C++C+++I g ev++al ++wH++CF+C  C+kp++++ f+ +dg+
     fk10515   318    ECGRCQRKILG-EVINALKQTWHVSCFVCVACGKPIRNnVFHLEDGE 363  

                   lyCkdc<-*
                   +yC+ +   
     fk10515   364 PYCETD    369  

SM00132: domain 3 of 3, from 377 to 430: score 71.2, E = 1.3e-16
                   *->kCagCgkpItg.devlralgkvwHpeCFkCskCkkpLgg.tffekdg
                      +C+gC  pI+++d+ l+alg++wH  CF+Cs+C  +L+g+tff+k++
     fk10515   377    ICHGCEFPIEAgDMFLEALGYTWHDTCFVCSVCCESLEGqTFFSKKD 423  

                   klyCkdc<-*
                   k++Ck++   
     fk10515   424 KPLCKKH    430  

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