hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-10054995/chunk_1/iprscan-20080811-10054995.nocrc
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Query sequence: fk11053
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00069.15.ls Protein kinase domain                       231.5    1.8e-66   1
PF00069.15.fs Protein kinase domain                       229.5    6.7e-66   1
PF07714.7.fs Protein tyrosine kinase                      14.7    0.00036   2

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00069.15.fs   1/1      98   414 ..     1   287 []   229.5  6.7e-66
PF00069.15.ls   1/1      98   414 ..     1   287 []   231.5  1.8e-66
PF07714.7.fs   2/2     187   226 ..    99   139 ..    10.2   0.0072

Alignments of top-scoring domains:
PF00069.15.fs: domain 1 of 1, from 98 to 414: score 229.5, E = 6.7e-66
                   *->yelleklGsGsfGtVykakhkgtgk.iVAvKiikkrkekskkdktar
                      ye+++ lG+G+fG+V ++ ++  gk++VA+Kii+ +++  +  +   
     fk11053    98    YEIVGNLGEGTFGKVVECLDHARGKsQVALKIIRNVGKYREAARL-- 142  

                   rlsEiqilkrLs.....HpNI.vrlidvfedkdhlylVlEycegGLrvld
                      Ei +lk++++++++ ++  v + d+f  ++h+++ +E++++      
     fk11053   143 ---EINVLKKIKekdkeNKFLcVLMSDWFNFHGHMCIAFELLGK-----N 184  

                   Lfdylsetrrkgpll.fsedeakkialQilrgleYLHsngiiHRDLKPeN
                    f++l+    ++++ + +  +++++a+Q++ +l +LH+n   H DLKPeN
     fk11053   185 TFEFLK----ENNFQpYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPEN 230  

                   ILldnngvvda................flKiaDFGlAkklst.sss.ltt
                   IL++ n + ++  +++++ ++++ +++++++aDFG+A    t   ++ tt
     fk11053   231 ILFV-NSEFETlynehksceeksvkntSIRVADFGSA----TfDHEhHTT 275  

                   fvGTpwYmAPEvllggngygtkvDvWSlGvilyelltGkpPFsgevqds.
                   +v T++Y++PEv+l   g+ +++DvWS+G+il+e + G ++F+ +   ++
     fk11053   276 IVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTH---En 321  

                   ldqlqlirkilgpplefdspewdsisrse.fr..................
                   + +l++++kilgp+++  +   ++ +  + f++++   ++++++++  ++
     fk11053   322 REHLVMMEKILGPIPSHMI---HRTRKQKyFYkgglvwdenssdgryvke 368  

                   ........r.l.pnlseeakdLikkcLnkDPskRltaeeilqHPwf<-*
                   + ++ ++ +  + + +  + dL++++L++DP++R+t +e+l HP+f   
     fk11053   369 nckplksyMlQdSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF    414  

PF00069.15.ls: domain 1 of 1, from 98 to 414: score 231.5, E = 1.8e-66
                   *->yelleklGsGsfGtVykakhkgtgk.iVAvKiikkrkekskkdktar
                      ye+++ lG+G+fG+V ++ ++  gk++VA+Kii+ +++  +  +   
     fk11053    98    YEIVGNLGEGTFGKVVECLDHARGKsQVALKIIRNVGKYREAARL-- 142  

                   rlsEiqilkrLs.....HpNI.vrlidvfedkdhlylVlEycegGLrvld
                      Ei +lk++++++++ ++  v + d+f  ++h+++ +E++++      
     fk11053   143 ---EINVLKKIKekdkeNKFLcVLMSDWFNFHGHMCIAFELLGK-----N 184  

                   Lfdylsetrrkgpll.fsedeakkialQilrgleYLHsngiiHRDLKPeN
                    f++l+    ++++ + +  +++++a+Q++ +l +LH+n   H DLKPeN
     fk11053   185 TFEFLK----ENNFQpYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPEN 230  

                   ILldnngvvda................flKiaDFGlAkklst.sss.ltt
                   IL++ n + ++  +++++ ++++ +++++++aDFG+A    t   ++ tt
     fk11053   231 ILFV-NSEFETlynehksceeksvkntSIRVADFGSA----TfDHEhHTT 275  

                   fvGTpwYmAPEvllggngygtkvDvWSlGvilyelltGkpPFsgevqds.
                   +v T++Y++PEv+l   g+ +++DvWS+G+il+e + G ++F+ +   ++
     fk11053   276 IVATRHYRPPEVIL-ELGWAQPCDVWSIGCILFEYYRGFTLFQTH---En 321  

                   ldqlqlirkilgpplefdspewdsisrse.fr..................
                   + +l++++kilgp+++  +   ++ +  + f++++   ++++++++  ++
     fk11053   322 REHLVMMEKILGPIPSHMI---HRTRKQKyFYkgglvwdenssdgryvke 368  

                   ........r.l.pnlseeakdLikkcLnkDPskRltaeeilqHPwf<-*
                   + ++ ++ +  + + +  + dL++++L++DP++R+t +e+l HP+f   
     fk11053   369 nckplksyMlQdSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF    414  

PF07714.7.fs: domain 2 of 2, from 187 to 226: score 10.2, E = 0.0072
                   *->dfLrkhregrpLtlkdLlsfalQiAkGMeYLesknfvHRDL<-*
                      +fL+++ + +p +l++  ++a+Q + ++ +L+++++ H DL   
     fk11053   187    EFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDL    226  

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