# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofk11143.fasta.nr -Q fk11143.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fk11143, 475 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8981613 sequences Expectation_n fit: rho(ln(x))= 6.2777+/-0.000194; mu= 6.8924+/- 0.011 mean_var=107.7635+/-20.706, 0's: 29 Z-trim: 43 B-trim: 6 in 1/67 Lambda= 0.123549 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|115311621|sp|Q96KN3.2|PKNX2_HUMAN RecName: Full ( 472) 3133 568.9 1.1e-159 gi|190691017|gb|ACE87283.1| PBX/knotted 1 homeobox ( 472) 3127 567.9 2.3e-159 gi|75041271|sp|Q5R6L1.1|PKNX2_PONAB RecName: Full= ( 472) 3117 566.1 7.9e-159 gi|68084588|gb|AAH45626.3| PBX/knotted 1 homeobox ( 471) 3115 565.7 1e-158 gi|194212951|ref|XP_001505126.2| PREDICTED: simila ( 472) 3113 565.4 1.3e-158 gi|73954548|ref|XP_849311.1| PREDICTED: similar to ( 472) 3102 563.4 5.1e-158 gi|81913097|sp|Q8BG99.1|PKNX2_MOUSE RecName: Full= ( 474) 3096 562.3 1.1e-157 gi|221136920|ref|NP_001137580.1| Pbx/knotted 1 hom ( 472) 3088 560.9 2.9e-157 gi|126327237|ref|XP_001364926.1| PREDICTED: simila ( 473) 3086 560.5 3.7e-157 gi|149028712|gb|EDL84053.1| rCG58870, isoform CRA_ ( 475) 3082 559.8 6e-157 gi|16416147|emb|CAD01142.1| PREP2 protein [Homo sa ( 460) 3052 554.5 2.4e-155 gi|109109137|ref|XP_001110645.1| PREDICTED: PBX/kn ( 460) 3048 553.8 3.9e-155 gi|20279043|gb|AAM18702.1|AF487460_1 homeodomain c ( 461) 3008 546.6 5.5e-153 gi|221045924|dbj|BAH14639.1| unnamed protein produ ( 443) 2924 531.7 1.7e-148 gi|221041052|dbj|BAH12203.1| unnamed protein produ ( 443) 2920 530.9 2.8e-148 gi|221045390|dbj|BAH14372.1| unnamed protein produ ( 443) 2913 529.7 6.7e-148 gi|119588035|gb|EAW67631.1| PBX/knotted 1 homeobox ( 438) 2849 518.3 1.8e-144 gi|183985896|gb|AAI66172.1| Pknox2 protein [Xenopu ( 468) 2826 514.2 3.2e-143 gi|224083622|ref|XP_002197549.1| PREDICTED: PBX/kn ( 479) 2644 481.8 1.9e-133 gi|221042488|dbj|BAH12921.1| unnamed protein produ ( 408) 2630 479.2 9.6e-133 gi|23495534|dbj|BAC20214.1| TALE homeodomain trans ( 477) 2619 477.3 4.2e-132 gi|23495538|dbj|BAC20216.1| TALE homeodomain trans ( 474) 2445 446.3 9.1e-123 gi|47223827|emb|CAF98597.1| unnamed protein produc ( 451) 2396 437.5 3.7e-120 gi|189524383|ref|XP_001919871.1| PREDICTED: simila ( 488) 2097 384.3 4.4e-104 gi|10434919|dbj|BAB14422.1| unnamed protein produc ( 306) 1983 363.8 4e-98 gi|73954550|ref|XP_858483.1| PREDICTED: similar to ( 462) 1706 314.6 4e-83 gi|114684520|ref|XP_001142036.1| PREDICTED: PBX/kn ( 444) 1689 311.5 3.2e-82 gi|209155930|gb|ACI34197.1| Homeobox protein PKNOX ( 446) 1331 247.7 5.1e-63 gi|73954554|ref|XP_536535.2| PREDICTED: similar to ( 204) 1321 245.7 9.6e-63 gi|149418155|ref|XP_001521700.1| PREDICTED: simila ( 350) 1304 242.8 1.2e-61 gi|73954552|ref|XP_858520.1| PREDICTED: similar to ( 423) 1289 240.2 8.8e-61 gi|149592562|ref|XP_001521220.1| PREDICTED: simila ( 195) 1268 236.2 6.5e-60 gi|125804420|ref|XP_707868.2| PREDICTED: pbx/knott ( 445) 1270 236.8 9.6e-60 gi|161612085|gb|AAI55782.1| Pknox1.1 protein [Dani ( 433) 1268 236.5 1.2e-59 gi|169158132|emb|CAQ13735.1| pbx/knotted 1 homeobo ( 433) 1267 236.3 1.4e-59 gi|14532260|gb|AAK66560.1|AF382393_1 pbx/knotted-1 ( 433) 1267 236.3 1.4e-59 gi|26350995|dbj|BAC39134.1| unnamed protein produc ( 234) 1262 235.2 1.6e-59 gi|32451815|gb|AAH54667.1| Pknox1.1 protein [Danio ( 377) 1137 213.1 1.2e-52 gi|70570981|dbj|BAE06656.1| transcription factor p ( 442) 1110 208.3 3.7e-51 gi|194378332|dbj|BAG57916.1| unnamed protein produ ( 319) 945 178.8 2e-42 gi|149633765|ref|XP_001511504.1| PREDICTED: simila ( 436) 823 157.2 9.1e-36 gi|60552173|gb|AAH91397.1| PBX/knotted 1 homeobox ( 436) 807 154.3 6.6e-35 gi|30931329|gb|AAH52701.1| Pbx/knotted 1 homeobox ( 436) 804 153.8 9.6e-35 gi|115311620|sp|O70477.2|PKNX1_MOUSE RecName: Full ( 436) 801 153.2 1.4e-34 gi|148708403|gb|EDL40350.1| Pbx/knotted 1 homeobox ( 435) 797 152.5 2.3e-34 gi|3126849|gb|AAC15990.1| homeobox protein PKNOX1 ( 435) 794 152.0 3.3e-34 gi|115311619|sp|P55347.3|PKNX1_HUMAN RecName: Full ( 436) 794 152.0 3.3e-34 gi|62897343|dbj|BAD96612.1| PBX/knotted 1 homeobox ( 436) 793 151.8 3.7e-34 gi|109065196|ref|XP_001104826.1| PREDICTED: simila ( 436) 791 151.5 4.8e-34 gi|2052385|gb|AAC51243.1| homeobox-containing prot ( 435) 789 151.1 6.1e-34 >>gi|115311621|sp|Q96KN3.2|PKNX2_HUMAN RecName: Full=Hom (472 aa) initn: 3133 init1: 3133 opt: 3133 Z-score: 3024.2 bits: 568.9 E(): 1.1e-159 Smith-Waterman score: 3133; 100.000% identity (100.000% similar) in 472 aa overlap (4-475:1-472) 10 20 30 40 50 60 fk1114 INPMMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVP 10 20 30 40 50 70 80 90 100 110 120 fk1114 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE 60 70 80 90 100 110 130 140 150 160 170 180 fk1114 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR 120 130 140 150 160 170 190 200 210 220 230 240 fk1114 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV 180 190 200 210 220 230 250 260 270 280 290 300 fk1114 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK 240 250 260 270 280 290 310 320 330 340 350 360 fk1114 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD 300 310 320 330 340 350 370 380 390 400 410 420 fk1114 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAM 360 370 380 390 400 410 430 440 450 460 470 fk1114 QQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 QQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE 420 430 440 450 460 470 >>gi|190691017|gb|ACE87283.1| PBX/knotted 1 homeobox 2 p (472 aa) initn: 3127 init1: 3127 opt: 3127 Z-score: 3018.4 bits: 567.9 E(): 2.3e-159 Smith-Waterman score: 3127; 99.788% identity (100.000% similar) in 472 aa overlap (4-475:1-472) 10 20 30 40 50 60 fk1114 INPMMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVP 10 20 30 40 50 70 80 90 100 110 120 fk1114 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|190 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATRGSECITSASFDVDIENFVHQQE 60 70 80 90 100 110 130 140 150 160 170 180 fk1114 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR 120 130 140 150 160 170 190 200 210 220 230 240 fk1114 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV 180 190 200 210 220 230 250 260 270 280 290 300 fk1114 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK 240 250 260 270 280 290 310 320 330 340 350 360 fk1114 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD 300 310 320 330 340 350 370 380 390 400 410 420 fk1114 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAM 360 370 380 390 400 410 430 440 450 460 470 fk1114 QQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|190 QQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE 420 430 440 450 460 470 >>gi|75041271|sp|Q5R6L1.1|PKNX2_PONAB RecName: Full=Home (472 aa) initn: 3117 init1: 3117 opt: 3117 Z-score: 3008.8 bits: 566.1 E(): 7.9e-159 Smith-Waterman score: 3117; 99.363% identity (100.000% similar) in 471 aa overlap (4-474:1-471) 10 20 30 40 50 60 fk1114 INPMMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVP :::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|750 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATTQPPSKAQAVHISAPSAAASTPVP 10 20 30 40 50 70 80 90 100 110 120 fk1114 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE 60 70 80 90 100 110 130 140 150 160 170 180 fk1114 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR 120 130 140 150 160 170 190 200 210 220 230 240 fk1114 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV 180 190 200 210 220 230 250 260 270 280 290 300 fk1114 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK 240 250 260 270 280 290 310 320 330 340 350 360 fk1114 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|750 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFVNARRRILQPMLDASNPD 300 310 320 330 340 350 370 380 390 400 410 420 fk1114 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAM ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|750 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDNATMAM 360 370 380 390 400 410 430 440 450 460 470 fk1114 QQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 QQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLV 420 430 440 450 460 470 >>gi|68084588|gb|AAH45626.3| PBX/knotted 1 homeobox 2 [H (471 aa) initn: 2981 init1: 2981 opt: 3115 Z-score: 3006.8 bits: 565.7 E(): 1e-158 Smith-Waterman score: 3115; 99.788% identity (99.788% similar) in 472 aa overlap (4-475:1-471) 10 20 30 40 50 60 fk1114 INPMMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVP ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVP 10 20 30 40 50 70 80 90 100 110 120 fk1114 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE 60 70 80 90 100 110 130 140 150 160 170 180 fk1114 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR 120 130 140 150 160 170 190 200 210 220 230 240 fk1114 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV 180 190 200 210 220 230 250 260 270 280 290 300 fk1114 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK 240 250 260 270 280 290 310 320 330 340 350 360 fk1114 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD 300 310 320 330 340 350 370 380 390 400 410 420 fk1114 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|680 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAM 360 370 380 390 400 410 430 440 450 460 470 fk1114 QQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE ::::::::::::::::::::::::::::: ::::::::::::::::::::::::: gi|680 QQAMMAAHDDSLDGTEEEDEDEMEEEEEE-LEEEVDELQTTNVSDLGLEHSDSLE 420 430 440 450 460 470 >>gi|194212951|ref|XP_001505126.2| PREDICTED: similar to (472 aa) initn: 3113 init1: 3113 opt: 3113 Z-score: 3004.9 bits: 565.4 E(): 1.3e-158 Smith-Waterman score: 3113; 99.364% identity (99.788% similar) in 472 aa overlap (4-475:1-472) 10 20 30 40 50 60 fk1114 INPMMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVP ::::::::::::::::::::::::::::::::::: ::::::::::::::::::::: gi|194 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQAPSKAQAVHISAPSAAASTPVP 10 20 30 40 50 70 80 90 100 110 120 fk1114 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE 60 70 80 90 100 110 130 140 150 160 170 180 fk1114 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR 120 130 140 150 160 170 190 200 210 220 230 240 fk1114 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV 180 190 200 210 220 230 250 260 270 280 290 300 fk1114 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK 240 250 260 270 280 290 310 320 330 340 350 360 fk1114 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD 300 310 320 330 340 350 370 380 390 400 410 420 fk1114 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAM ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|194 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDNATMAM 360 370 380 390 400 410 430 440 450 460 470 fk1114 QQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE ::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|194 QQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEADELQTTNVSDLGLEHSDSLE 420 430 440 450 460 470 >>gi|73954548|ref|XP_849311.1| PREDICTED: similar to Pbx (472 aa) initn: 3102 init1: 3102 opt: 3102 Z-score: 2994.3 bits: 563.4 E(): 5.1e-158 Smith-Waterman score: 3102; 98.941% identity (99.788% similar) in 472 aa overlap (4-475:1-472) 10 20 30 40 50 60 fk1114 INPMMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVP ::::::::::::::::::::::::::::::::::: :::.::::::::::::::::: gi|739 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQAPSKTQAVHISAPSAAASTPVP 10 20 30 40 50 70 80 90 100 110 120 fk1114 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE 60 70 80 90 100 110 130 140 150 160 170 180 fk1114 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR 120 130 140 150 160 170 190 200 210 220 230 240 fk1114 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV 180 190 200 210 220 230 250 260 270 280 290 300 fk1114 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK 240 250 260 270 280 290 310 320 330 340 350 360 fk1114 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD 300 310 320 330 340 350 370 380 390 400 410 420 fk1114 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAM :::::::::::::::::::::::::::::::::::::::::::.::::::::::.::::: gi|739 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSISLDNLQSLSSDNATMAM 360 370 380 390 400 410 430 440 450 460 470 fk1114 QQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE ::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|739 QQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEETDELQTTNVSDLGLEHSDSLE 420 430 440 450 460 470 >>gi|81913097|sp|Q8BG99.1|PKNX2_MOUSE RecName: Full=Home (474 aa) initn: 3025 init1: 2969 opt: 3096 Z-score: 2988.5 bits: 562.3 E(): 1.1e-157 Smith-Waterman score: 3096; 98.523% identity (99.578% similar) in 474 aa overlap (4-475:1-474) 10 20 30 40 50 60 fk1114 INPMMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVP ::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|819 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSATASTPVP 10 20 30 40 50 70 80 90 100 110 120 fk1114 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE 60 70 80 90 100 110 130 140 150 160 170 180 fk1114 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR 120 130 140 150 160 170 190 200 210 220 230 240 fk1114 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV 180 190 200 210 220 230 250 260 270 280 290 300 fk1114 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK 240 250 260 270 280 290 310 320 330 340 350 360 fk1114 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|819 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD 300 310 320 330 340 350 370 380 390 400 410 420 fk1114 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAM :::::::::::::::::::::::::::::::::.::::::::::::::::::::.::::: gi|819 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGTPGTNPDGSINLDNLQSLSSDNATMAM 360 370 380 390 400 410 430 440 450 460 470 fk1114 QQAMMAAHDDSLDGTEEEDEDEMEEEEEEE--LEEEVDELQTTNVSDLGLEHSDSLE :::::::::::::::::::::.:::::::: ::::.:::::::::::::::::::: gi|819 QQAMMAAHDDSLDGTEEEDEDDMEEEEEEEEELEEEADELQTTNVSDLGLEHSDSLE 420 430 440 450 460 470 >>gi|221136920|ref|NP_001137580.1| Pbx/knotted 1 homeobo (472 aa) initn: 3088 init1: 3088 opt: 3088 Z-score: 2980.8 bits: 560.9 E(): 2.9e-157 Smith-Waterman score: 3088; 98.517% identity (99.576% similar) in 472 aa overlap (4-475:1-472) 10 20 30 40 50 60 fk1114 INPMMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVP :::::::::::::::::::::: :::::::::::: ::::::::::.:::::::::: gi|221 MMQHASPAPALTMMATQNVPPPAYQDSPQMTATAQAPSKAQAVHISTPSAAASTPVP 10 20 30 40 50 70 80 90 100 110 120 fk1114 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 TAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE 60 70 80 90 100 110 130 140 150 160 170 180 fk1114 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR 120 130 140 150 160 170 190 200 210 220 230 240 fk1114 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV 180 190 200 210 220 230 250 260 270 280 290 300 fk1114 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK 240 250 260 270 280 290 310 320 330 340 350 360 fk1114 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD 300 310 320 330 340 350 370 380 390 400 410 420 fk1114 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAM ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|221 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDNATMAM 360 370 380 390 400 410 430 440 450 460 470 fk1114 QQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEVDELQTTNVSDLGLEHSDSLE ::::::::::::::::::.:::::::::::::::.:::::::::::::::::::: gi|221 QQAMMAAHDDSLDGTEEEEEDEMEEEEEEELEEEADELQTTNVSDLGLEHSDSLE 420 430 440 450 460 470 >>gi|126327237|ref|XP_001364926.1| PREDICTED: similar to (473 aa) initn: 3019 init1: 2957 opt: 3086 Z-score: 2978.9 bits: 560.5 E(): 3.7e-157 Smith-Waterman score: 3086; 98.097% identity (99.577% similar) in 473 aa overlap (4-475:1-473) 10 20 30 40 50 60 fk1114 INPMMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVP ::::::::::::::::::::::::::.::::::::::.::::::::::::::::::: gi|126 MMQHASPAPALTMMATQNVPPPPYQDTPQMTATAQPPTKAQAVHISAPSAAASTPVP 10 20 30 40 50 70 80 90 100 110 120 fk1114 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE 60 70 80 90 100 110 130 140 150 160 170 180 fk1114 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR 120 130 140 150 160 170 190 200 210 220 230 240 fk1114 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV ::::::::::::::::: :::::::::::.:::::::::::::::::::::::::::::: gi|126 NDLGGPYSPNQPSINLHPQDLLQNSPNSMTGVSNNPQGIVVPASALQQGNIAMTTVNSQV 180 190 200 210 220 230 250 260 270 280 290 300 fk1114 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK 240 250 260 270 280 290 310 320 330 340 350 360 fk1114 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD 300 310 320 330 340 350 370 380 390 400 410 420 fk1114 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAM :::::::::::::::::::::::::::::::::.::::::::::::::::::::.::::: gi|126 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGGPGTNPDGSINLDNLQSLSSDNATMAM 360 370 380 390 400 410 430 440 450 460 470 fk1114 QQAMMAAHDDSLDGTEEEDEDEMEEEEEEE-LEEEVDELQTTNVSDLGLEHSDSLE ::::::::.::::::::::::::::::::: ::::.:::::::::::::::::::: gi|126 QQAMMAAHEDSLDGTEEEDEDEMEEEEEEEELEEETDELQTTNVSDLGLEHSDSLE 420 430 440 450 460 470 >>gi|149028712|gb|EDL84053.1| rCG58870, isoform CRA_b [R (475 aa) initn: 3087 init1: 2971 opt: 3082 Z-score: 2975.0 bits: 559.8 E(): 6e-157 Smith-Waterman score: 3082; 97.895% identity (99.158% similar) in 475 aa overlap (4-475:1-475) 10 20 30 40 50 60 fk1114 INPMMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVP :::::::::::::::::::::::::::::::::::::::::::::.::::.:::::: gi|149 MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHIAAPSATASTPVP 10 20 30 40 50 70 80 90 100 110 120 fk1114 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQE 60 70 80 90 100 110 130 140 150 160 170 180 fk1114 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLR 120 130 140 150 160 170 190 200 210 220 230 240 fk1114 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NDLGGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQV 180 190 200 210 220 230 250 260 270 280 290 300 fk1114 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VSGGALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPK 240 250 260 270 280 290 310 320 330 340 350 360 fk1114 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 HATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPD 300 310 320 330 340 350 370 380 390 400 410 420 fk1114 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDSATMAM :::::::::::::::::::::::::::::::::.::::::::::::::::::::.::::: gi|149 PAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGTPGTNPDGSINLDNLQSLSSDNATMAM 360 370 380 390 400 410 430 440 450 460 470 fk1114 QQAMMAAHDDSLDGTEEEDEDEMEEEEEEELE---EEVDELQTTNVSDLGLEHSDSLE :::::::::::::::::::::.:::::::: : ::.:::::::::::::::::::: gi|149 QQAMMAAHDDSLDGTEEEDEDDMEEEEEEEEELEEEEADELQTTNVSDLGLEHSDSLE 420 430 440 450 460 470 475 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Thu Jun 18 12:52:47 2009 done: Thu Jun 18 12:55:54 2009 Total Scan time: 1123.230 Total Display time: 0.140 Function used was FASTA [version 34.26.5 April 26, 2007]