hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-10550505/chunk_1/iprscan-20080811-10550505.nocrc
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Query sequence: fk11515
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00225                                                  82.0    7.1e-20   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00225    1/1     399   492 ..     1   114 []    82.0  7.1e-20

Alignments of top-scoring domains:
SM00225: domain 1 of 1, from 399 to 492: score 82.0, E = 7.1e-20
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                       D++++v+g         k ++a  Hk++L  +   +++F++ +e++
     fk11515   399    ADLKFLVDG---------KYIYA--HKVLLKIR---CEHFRSSLEDn 431  

                   ....ieldDeallievspeaFralLnflYt.kldlpeedvenveelLelA
                   +++ +e+++      +s+++ ra+L++lYt++++l++e   ++ +lL+lA
     fk11515   432 eddiVEMSE------FSYPVYRAFLEYLYTdSISLSPE---EAVGLLDLA 472  

                   dfldSYGqip.lvelCeefllknl<-*
                    f+       +l++lC++ +++ +   
     fk11515   473 TFY----RENrLKKLCQQTIKQGI    492  

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