# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofk11601.fasta.nr -Q fk11601.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fk11601, 1187 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8954340 sequences Expectation_n fit: rho(ln(x))= 7.2935+/-0.000216; mu= 6.0293+/- 0.012 mean_var=182.8403+/-35.081, 0's: 47 Z-trim: 120 B-trim: 82 in 1/66 Lambda= 0.094850 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|4337109|gb|AAD18085.1| BAT3 [Homo sapiens] (1229) 7669 1062.8 0 gi|119623864|gb|EAX03459.1| HLA-B associated trans (1229) 7663 1062.0 0 gi|13111925|gb|AAH03133.1| HLA-B associated transc (1126) 7643 1059.2 0 gi|57997480|emb|CAI46045.1| hypothetical protein [ (1126) 7639 1058.7 0 gi|15277262|dbj|BAB63390.1| BAT3 [Homo sapiens] (1126) 7637 1058.4 0 gi|76800648|sp|P46379.2|BAT3_HUMAN RecName: Full=L (1132) 7621 1056.2 0 gi|119623860|gb|EAX03455.1| HLA-B associated trans (1132) 7615 1055.4 0 gi|179347|gb|AAA35587.1| HLA-B-associated transcri (1132) 7608 1054.4 0 gi|194223333|ref|XP_001490565.2| PREDICTED: HLA-B (1122) 7346 1018.6 0 gi|194223335|ref|XP_001490615.2| PREDICTED: HLA-B (1128) 7324 1015.6 0 gi|73972230|ref|XP_859267.1| PREDICTED: similar to (1131) 7310 1013.6 0 gi|147832424|emb|CAN59676.1| HLA-B associated tran (1128) 7275 1008.9 0 gi|162138209|gb|ABX82810.1| HLA-B-associated prote (1128) 7255 1006.1 0 gi|161621275|ref|NP_001068834.2| HLA-B associated (1128) 7237 1003.7 0 gi|194677726|ref|XP_001790024.1| PREDICTED: HLA-B (1134) 7215 1000.6 0 gi|194389256|dbj|BAG65616.1| unnamed protein produ (1077) 7047 977.6 0 gi|73972216|ref|XP_859003.1| PREDICTED: similar to (1081) 6781 941.2 0 gi|147832423|emb|CAN59675.1| HLA-B associated tran (1078) 6755 937.7 0 gi|119623865|gb|EAX03460.1| HLA-B associated trans (1140) 6463 897.7 0 gi|73972210|ref|XP_858887.1| PREDICTED: similar to (1031) 6241 867.3 0 gi|73972224|ref|XP_859150.1| PREDICTED: similar to (1080) 6241 867.3 0 gi|73972228|ref|XP_859225.1| PREDICTED: similar to (1145) 6184 859.6 0 gi|147832425|emb|CAN59677.1| HLA-B associated tran ( 816) 5349 745.2 4.2e-212 gi|156602034|gb|ABU86908.1| Bat3 [Ornithorhynchus (1088) 5294 737.8 9.5e-210 gi|126309662|ref|XP_001376050.1| PREDICTED: simila (1114) 5271 734.6 8.5e-209 gi|119623863|gb|EAX03458.1| HLA-B associated trans (1162) 4410 616.8 2.6e-173 gi|73972204|ref|XP_858776.1| PREDICTED: similar to (1149) 4284 599.6 4e-168 gi|73972202|ref|XP_849429.1| PREDICTED: similar to (1167) 4284 599.6 4e-168 gi|148694698|gb|EDL26645.1| HLA-B-associated trans ( 851) 3794 532.4 4.9e-148 gi|74221893|dbj|BAE28666.1| unnamed protein produc (1136) 3793 532.4 6.6e-148 gi|76364091|sp|Q9Z1R2.1|BAT3_MOUSE RecName: Full=L (1154) 3793 532.4 6.7e-148 gi|20072380|gb|AAH26647.1| Bat3 protein [Mus muscu ( 836) 3783 530.9 1.4e-147 gi|73972218|ref|XP_532073.2| PREDICTED: similar to (1118) 3774 529.8 4e-147 gi|71682190|gb|AAI00142.1| HLA-B-associated transc (1146) 3773 529.6 4.4e-147 gi|149028085|gb|EDL83536.1| rCG38346, isoform CRA_ (1183) 3773 529.7 4.5e-147 gi|194380314|dbj|BAG63924.1| unnamed protein produ ( 903) 3740 525.0 8.6e-146 gi|148694700|gb|EDL26647.1| HLA-B-associated trans (1147) 3716 521.9 9.9e-145 gi|149028086|gb|EDL83537.1| rCG38346, isoform CRA_ (1139) 3696 519.1 6.6e-144 gi|149028080|gb|EDL83531.1| rCG38346, isoform CRA_ ( 701) 3529 496.0 3.5e-137 gi|148694697|gb|EDL26644.1| HLA-B-associated trans ( 709) 3490 490.7 1.4e-135 gi|168984730|emb|CAQ06978.1| HLA-B associated tran ( 743) 3345 470.9 1.4e-129 gi|123270994|emb|CAI18316.2| HLA-B associated tran ( 743) 3334 469.4 4e-129 gi|123270995|emb|CAI18318.2| HLA-B associated tran ( 515) 3287 462.8 2.7e-127 gi|74206669|dbj|BAE41587.1| unnamed protein produc (1108) 3292 463.8 2.8e-127 gi|148694704|gb|EDL26651.1| HLA-B-associated trans (1105) 3274 461.4 1.6e-126 gi|76364092|sp|Q6MG49.1|BAT3_RAT RecName: Full=Lar (1096) 3257 459.0 7.7e-126 gi|149028084|gb|EDL83535.1| rCG38346, isoform CRA_ (1097) 3254 458.6 1e-125 gi|55700763|dbj|BAD69718.1| HLA-B associated trans ( 481) 3246 457.1 1.2e-125 gi|4587081|dbj|BAA76607.1| BAT3 [Rattus norvegicus (1098) 3252 458.3 1.2e-125 gi|73972214|ref|XP_858965.1| PREDICTED: similar to (1067) 3215 453.3 4.1e-124 >>gi|4337109|gb|AAD18085.1| BAT3 [Homo sapiens] (1229 aa) initn: 7658 init1: 7658 opt: 7669 Z-score: 5678.7 bits: 1062.8 E(): 0 Smith-Waterman score: 7673; 95.739% identity (96.575% similar) in 1197 aa overlap (4-1187:36-1229) 10 20 30 fk1160 HLGRPRPDSPSETHCL-GLRTFSSCPTKVKLGD :: : . . : : : : : : gi|433 RIRSATHAGVVRSPGRQRWRLLGVLGSLPPRPAPARLALRNSLFGAADFLVVPHKSKAWG 10 20 30 40 50 60 40 50 60 70 80 fk1160 LGGA------------GSIASRSPNTIGETEVAVGGRDLSAMEPNDSTSTAVEEPDSLEV ::. :. ..: .. :. ::.: :::::::::::::::::::::: gi|433 PGGSRKYRFEIPKYYRGNGSGRRWQVWGRPEVTV---HLSAMEPNDSTSTAVEEPDSLEV 70 80 90 100 110 120 90 100 110 120 130 140 fk1160 LVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 LVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGG 130 140 150 160 170 180 150 160 170 180 190 200 fk1160 KVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 KVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFN 190 200 210 220 230 240 210 220 230 240 250 260 fk1160 LPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 LPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQ 250 260 270 280 290 300 270 280 290 300 310 320 fk1160 PPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 PPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPET 310 320 330 340 350 360 330 340 350 360 370 380 fk1160 NAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 NAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINL 370 380 390 400 410 420 390 400 410 420 430 440 fk1160 VGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 VGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTV 430 440 450 460 470 480 450 460 470 480 490 500 fk1160 TMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 TMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIR 490 500 510 520 530 540 510 520 530 540 550 560 fk1160 ISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 ISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIA 550 560 570 580 590 600 570 580 590 600 610 620 fk1160 RPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 RPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPP 610 620 630 640 650 660 630 640 650 660 670 680 fk1160 PAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 PAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGS 670 680 690 700 710 720 690 700 710 720 730 740 fk1160 GVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 GVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGA 730 740 750 760 770 780 750 760 770 780 790 800 fk1160 GSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 GSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGAD 790 800 810 820 830 840 810 820 830 840 850 860 fk1160 GALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 GALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIR 850 860 870 880 890 900 870 880 890 900 910 920 fk1160 MATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 MATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARL 910 920 930 940 950 960 930 940 950 960 970 980 fk1160 LELCNQGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 LELCNQGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVV 970 980 990 1000 1010 1020 990 1000 1010 1020 1030 1040 fk1160 LEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 LEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMS 1030 1040 1050 1060 1070 1080 1050 1060 1070 1080 1090 1100 fk1160 RGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 RGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSG 1090 1100 1110 1120 1130 1140 1110 1120 1130 1140 1150 1160 fk1160 MPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|433 MPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSD 1150 1160 1170 1180 1190 1200 1170 1180 fk1160 IQKRLQEDPNYSPQRFPNAQRAFADDP ::::::::::::::::::::::::::: gi|433 IQKRLQEDPNYSPQRFPNAQRAFADDP 1210 1220 >>gi|119623864|gb|EAX03459.1| HLA-B associated transcrip (1229 aa) initn: 7652 init1: 7652 opt: 7663 Z-score: 5674.3 bits: 1062.0 E(): 0 Smith-Waterman score: 7667; 95.656% identity (96.491% similar) in 1197 aa overlap (4-1187:36-1229) 10 20 30 fk1160 HLGRPRPDSPSETHCL-GLRTFSSCPTKVKLGD :: : . . : : : : : : gi|119 RIRSATHAGVVRSPGRQRWRLLGVLGSLPPRPAPARLALRNSLFGAADFLVVPHKSKAWG 10 20 30 40 50 60 40 50 60 70 80 fk1160 LGGA------------GSIASRSPNTIGETEVAVGGRDLSAMEPNDSTSTAVEEPDSLEV ::. :. ..: .. :. ::.: :::::::::::::::::::::: gi|119 PGGSRKYRFEIPKYYRGNGSGRRWQVWGRPEVTV---HLSAMEPNDSTSTAVEEPDSLEV 70 80 90 100 110 120 90 100 110 120 130 140 fk1160 LVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LVKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGG 130 140 150 160 170 180 150 160 170 180 190 200 fk1160 KVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KVIHLVERAPPQTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFN 190 200 210 220 230 240 210 220 230 240 250 260 fk1160 LPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LPSDGSAVDVHINMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQ 250 260 270 280 290 300 270 280 290 300 310 320 fk1160 PPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PPAVTPEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPET 310 320 330 340 350 360 330 340 350 360 370 380 fk1160 NAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NAPNHPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINL 370 380 390 400 410 420 390 400 410 420 430 440 fk1160 VGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VGESLRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTV 430 440 450 460 470 480 450 460 470 480 490 500 fk1160 TMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TMTGNGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIR 490 500 510 520 530 540 510 520 530 540 550 560 fk1160 ISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ISHQSVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIA 550 560 570 580 590 600 570 580 590 600 610 620 fk1160 RPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RPTPPQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPP 610 620 630 640 650 660 630 640 650 660 670 680 fk1160 PAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGS ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PAPATASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGP 670 680 690 700 710 720 690 700 710 720 730 740 fk1160 GVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GVASPTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGA 730 740 750 760 770 780 750 760 770 780 790 800 fk1160 GSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GSPGGLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGAD 790 800 810 820 830 840 810 820 830 840 850 860 fk1160 GALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GALGFFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIR 850 860 870 880 890 900 870 880 890 900 910 920 fk1160 MATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MATHTLITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARL 910 920 930 940 950 960 930 940 950 960 970 980 fk1160 LELCNQGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LELCNQGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVV 970 980 990 1000 1010 1020 990 1000 1010 1020 1030 1040 fk1160 LEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LEHMPVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMS 1030 1040 1050 1060 1070 1080 1050 1060 1070 1080 1090 1100 fk1160 RGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RGPPPAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSG 1090 1100 1110 1120 1130 1140 1110 1120 1130 1140 1150 1160 fk1160 MPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MPAKRRKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSD 1150 1160 1170 1180 1190 1200 1170 1180 fk1160 IQKRLQEDPNYSPQRFPNAQRAFADDP ::::::::::::::::::::::::::: gi|119 IQKRLQEDPNYSPQRFPNAQRAFADDP 1210 1220 >>gi|13111925|gb|AAH03133.1| HLA-B associated transcript (1126 aa) initn: 7643 init1: 7643 opt: 7643 Z-score: 5660.0 bits: 1059.2 E(): 0 Smith-Waterman score: 7643; 100.000% identity (100.000% similar) in 1126 aa overlap (62-1187:1-1126) 40 50 60 70 80 90 fk1160 DLGGAGSIASRSPNTIGETEVAVGGRDLSAMEPNDSTSTAVEEPDSLEVLVKTLDSQTRT :::::::::::::::::::::::::::::: gi|131 MEPNDSTSTAVEEPDSLEVLVKTLDSQTRT 10 20 30 100 110 120 130 140 150 fk1160 FIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 FIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPP 40 50 60 70 80 90 160 170 180 190 200 210 fk1160 QTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 QTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVH 100 110 120 130 140 150 220 230 240 250 260 270 fk1160 INMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 INMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVAL 160 170 180 190 200 210 280 290 300 310 320 330 fk1160 SSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNHPSPAEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 SSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNHPSPAEY 220 230 240 250 260 270 340 350 360 370 380 390 fk1160 VEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 VEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNT 280 290 300 310 320 330 400 410 420 430 440 450 fk1160 FVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 FVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPP 340 350 360 370 380 390 460 470 480 490 500 510 fk1160 TPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 TPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVM 400 410 420 430 440 450 520 530 540 550 560 570 fk1160 MHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 MHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSH 460 470 480 490 500 510 580 590 600 610 620 630 fk1160 PGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 PGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAG 520 530 540 550 560 570 640 650 660 670 680 690 fk1160 TTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 TTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAM 580 590 600 610 620 630 700 710 720 730 740 750 fk1160 PGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 PGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESL 640 650 660 670 680 690 760 770 780 790 800 810 fk1160 SPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGFFGALLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 SPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGFFGALLS 700 710 720 730 740 750 820 830 840 850 860 870 fk1160 LLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATHTLITGLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 LLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATHTLITGLE 760 770 780 790 800 810 880 890 900 910 920 930 fk1160 EYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELCNQGLFEC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 EYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELCNQGLFEC 820 830 840 850 860 870 940 950 960 970 980 990 fk1160 LALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHMPVGPDAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 LALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHMPVGPDAI 880 890 900 910 920 930 1000 1010 1020 1030 1040 1050 fk1160 LRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 LRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGS 940 950 960 970 980 990 1060 1070 1080 1090 1100 1110 fk1160 RDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 RDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQG 1000 1010 1020 1030 1040 1050 1120 1130 1140 1150 1160 1170 fk1160 EGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|131 EGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNY 1060 1070 1080 1090 1100 1110 1180 fk1160 SPQRFPNAQRAFADDP :::::::::::::::: gi|131 SPQRFPNAQRAFADDP 1120 >>gi|57997480|emb|CAI46045.1| hypothetical protein [Homo (1126 aa) initn: 7639 init1: 7639 opt: 7639 Z-score: 5657.0 bits: 1058.7 E(): 0 Smith-Waterman score: 7639; 99.911% identity (100.000% similar) in 1126 aa overlap (62-1187:1-1126) 40 50 60 70 80 90 fk1160 DLGGAGSIASRSPNTIGETEVAVGGRDLSAMEPNDSTSTAVEEPDSLEVLVKTLDSQTRT :::::::::::::::::::::::::::::: gi|579 MEPNDSTSTAVEEPDSLEVLVKTLDSQTRT 10 20 30 100 110 120 130 140 150 fk1160 FIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 FIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPP 40 50 60 70 80 90 160 170 180 190 200 210 fk1160 QTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 QTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVH 100 110 120 130 140 150 220 230 240 250 260 270 fk1160 INMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 INMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVAL 160 170 180 190 200 210 280 290 300 310 320 330 fk1160 SSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNHPSPAEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 SSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNHPSPAEY 220 230 240 250 260 270 340 350 360 370 380 390 fk1160 VEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 VEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNT 280 290 300 310 320 330 400 410 420 430 440 450 fk1160 FVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 FVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPP 340 350 360 370 380 390 460 470 480 490 500 510 fk1160 TPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 TPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVM 400 410 420 430 440 450 520 530 540 550 560 570 fk1160 MHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 MHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSH 460 470 480 490 500 510 580 590 600 610 620 630 fk1160 PGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 PGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAG 520 530 540 550 560 570 640 650 660 670 680 690 fk1160 TTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 TTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAM 580 590 600 610 620 630 700 710 720 730 740 750 fk1160 PGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 PGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESL 640 650 660 670 680 690 760 770 780 790 800 810 fk1160 SPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGFFGALLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 SPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGFFGALLS 700 710 720 730 740 750 820 830 840 850 860 870 fk1160 LLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATHTLITGLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 LLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATHTLITGLE 760 770 780 790 800 810 880 890 900 910 920 930 fk1160 EYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELCNQGLFEC ::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|579 EYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHMLHCTDSGFGARLLELCNQGLFEC 820 830 840 850 860 870 940 950 960 970 980 990 fk1160 LALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHMPVGPDAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 LALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHMPVGPDAI 880 890 900 910 920 930 1000 1010 1020 1030 1040 1050 fk1160 LRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 LRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGS 940 950 960 970 980 990 1060 1070 1080 1090 1100 1110 fk1160 RDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 RDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQG 1000 1010 1020 1030 1040 1050 1120 1130 1140 1150 1160 1170 fk1160 EGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 EGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNY 1060 1070 1080 1090 1100 1110 1180 fk1160 SPQRFPNAQRAFADDP :::::::::::::::: gi|579 SPQRFPNAQRAFADDP 1120 >>gi|15277262|dbj|BAB63390.1| BAT3 [Homo sapiens] gi (1126 aa) initn: 7637 init1: 7637 opt: 7637 Z-score: 5655.5 bits: 1058.4 E(): 0 Smith-Waterman score: 7637; 99.911% identity (99.911% similar) in 1126 aa overlap (62-1187:1-1126) 40 50 60 70 80 90 fk1160 DLGGAGSIASRSPNTIGETEVAVGGRDLSAMEPNDSTSTAVEEPDSLEVLVKTLDSQTRT :::::::::::::::::::::::::::::: gi|152 MEPNDSTSTAVEEPDSLEVLVKTLDSQTRT 10 20 30 100 110 120 130 140 150 fk1160 FIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 FIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPP 40 50 60 70 80 90 160 170 180 190 200 210 fk1160 QTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 QTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVH 100 110 120 130 140 150 220 230 240 250 260 270 fk1160 INMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 INMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVAL 160 170 180 190 200 210 280 290 300 310 320 330 fk1160 SSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNHPSPAEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 SSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNHPSPAEY 220 230 240 250 260 270 340 350 360 370 380 390 fk1160 VEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 VEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESLRLLGNT 280 290 300 310 320 330 400 410 420 430 440 450 fk1160 FVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 FVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPPP 340 350 360 370 380 390 460 470 480 490 500 510 fk1160 TPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 TPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVVM 400 410 420 430 440 450 520 530 540 550 560 570 fk1160 MHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 MHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSH 460 470 480 490 500 510 580 590 600 610 620 630 fk1160 PGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 PGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASAG 520 530 540 550 560 570 640 650 660 670 680 690 fk1160 TTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVAM :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::::: gi|152 TTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGPGVASPTITVAM 580 590 600 610 620 630 700 710 720 730 740 750 fk1160 PGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 PGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLESL 640 650 660 670 680 690 760 770 780 790 800 810 fk1160 SPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGFFGALLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 SPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGFFGALLS 700 710 720 730 740 750 820 830 840 850 860 870 fk1160 LLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATHTLITGLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 LLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATHTLITGLE 760 770 780 790 800 810 880 890 900 910 920 930 fk1160 EYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELCNQGLFEC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 EYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELCNQGLFEC 820 830 840 850 860 870 940 950 960 970 980 990 fk1160 LALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHMPVGPDAI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 LALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHMPVGPDAI 880 890 900 910 920 930 1000 1010 1020 1030 1040 1050 fk1160 LRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 LRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGGS 940 950 960 970 980 990 1060 1070 1080 1090 1100 1110 fk1160 RDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 RDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQG 1000 1010 1020 1030 1040 1050 1120 1130 1140 1150 1160 1170 fk1160 EGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|152 EGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPNY 1060 1070 1080 1090 1100 1110 1180 fk1160 SPQRFPNAQRAFADDP :::::::::::::::: gi|152 SPQRFPNAQRAFADDP 1120 >>gi|76800648|sp|P46379.2|BAT3_HUMAN RecName: Full=Large (1132 aa) initn: 6457 init1: 6457 opt: 7621 Z-score: 5643.7 bits: 1056.2 E(): 0 Smith-Waterman score: 7621; 99.470% identity (99.470% similar) in 1132 aa overlap (62-1187:1-1132) 40 50 60 70 80 90 fk1160 DLGGAGSIASRSPNTIGETEVAVGGRDLSAMEPNDSTSTAVEEPDSLEVLVKTLDSQTRT :::::::::::::::::::::::::::::: gi|768 MEPNDSTSTAVEEPDSLEVLVKTLDSQTRT 10 20 30 100 110 120 130 140 150 fk1160 FIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 FIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPP 40 50 60 70 80 90 160 170 180 190 200 210 fk1160 QTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 QTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVH 100 110 120 130 140 150 220 230 240 250 260 fk1160 INMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRME------CRGGPQPQHSQPPPQPPAVT :::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|768 INMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMETLPYLQCRGGPQPQHSQPPPQPPAVT 160 170 180 190 200 210 270 280 290 300 310 320 fk1160 PEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 PEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNH 220 230 240 250 260 270 330 340 350 360 370 380 fk1160 PSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 PSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESL 280 290 300 310 320 330 390 400 410 420 430 440 fk1160 RLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 RLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGN 340 350 360 370 380 390 450 460 470 480 490 500 fk1160 GTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 GTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQS 400 410 420 430 440 450 510 520 530 540 550 560 fk1160 VEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 VEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP 460 470 480 490 500 510 570 580 590 600 610 620 fk1160 QARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 QARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPAT 520 530 540 550 560 570 630 640 650 660 670 680 fk1160 ASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 ASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASP 580 590 600 610 620 630 690 700 710 720 730 740 fk1160 TITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 TITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGG 640 650 660 670 680 690 750 760 770 780 790 800 fk1160 LGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 LGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGF 700 710 720 730 740 750 810 820 830 840 850 860 fk1160 FGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 FGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATHT 760 770 780 790 800 810 870 880 890 900 910 920 fk1160 LITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELCN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 LITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELCN 820 830 840 850 860 870 930 940 950 960 970 980 fk1160 QGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 QGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHMP 880 890 900 910 920 930 990 1000 1010 1020 1030 1040 fk1160 VGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 VGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPP 940 950 960 970 980 990 1050 1060 1070 1080 1090 1100 fk1160 APEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 APEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKR 1000 1010 1020 1030 1040 1050 1110 1120 1130 1140 1150 1160 fk1160 RKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|768 RKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRL 1060 1070 1080 1090 1100 1110 1170 1180 fk1160 QEDPNYSPQRFPNAQRAFADDP :::::::::::::::::::::: gi|768 QEDPNYSPQRFPNAQRAFADDP 1120 1130 >>gi|119623860|gb|EAX03455.1| HLA-B associated transcrip (1132 aa) initn: 6451 init1: 6451 opt: 7615 Z-score: 5639.2 bits: 1055.4 E(): 0 Smith-Waterman score: 7615; 99.382% identity (99.382% similar) in 1132 aa overlap (62-1187:1-1132) 40 50 60 70 80 90 fk1160 DLGGAGSIASRSPNTIGETEVAVGGRDLSAMEPNDSTSTAVEEPDSLEVLVKTLDSQTRT :::::::::::::::::::::::::::::: gi|119 MEPNDSTSTAVEEPDSLEVLVKTLDSQTRT 10 20 30 100 110 120 130 140 150 fk1160 FIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPP 40 50 60 70 80 90 160 170 180 190 200 210 fk1160 QTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVH 100 110 120 130 140 150 220 230 240 250 260 fk1160 INMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRME------CRGGPQPQHSQPPPQPPAVT :::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|119 INMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMETLPYLQCRGGPQPQHSQPPPQPPAVT 160 170 180 190 200 210 270 280 290 300 310 320 fk1160 PEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNH 220 230 240 250 260 270 330 340 350 360 370 380 fk1160 PSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESL 280 290 300 310 320 330 390 400 410 420 430 440 fk1160 RLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGN 340 350 360 370 380 390 450 460 470 480 490 500 fk1160 GTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQS 400 410 420 430 440 450 510 520 530 540 550 560 fk1160 VEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP 460 470 480 490 500 510 570 580 590 600 610 620 fk1160 QARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPAT 520 530 540 550 560 570 630 640 650 660 670 680 fk1160 ASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASP :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|119 ASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGPGVASP 580 590 600 610 620 630 690 700 710 720 730 740 fk1160 TITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGG 640 650 660 670 680 690 750 760 770 780 790 800 fk1160 LGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGF 700 710 720 730 740 750 810 820 830 840 850 860 fk1160 FGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATHT 760 770 780 790 800 810 870 880 890 900 910 920 fk1160 LITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELCN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELCN 820 830 840 850 860 870 930 940 950 960 970 980 fk1160 QGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHMP 880 890 900 910 920 930 990 1000 1010 1020 1030 1040 fk1160 VGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPP 940 950 960 970 980 990 1050 1060 1070 1080 1090 1100 fk1160 APEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 APEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKR 1000 1010 1020 1030 1040 1050 1110 1120 1130 1140 1150 1160 fk1160 RKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRL 1060 1070 1080 1090 1100 1110 1170 1180 fk1160 QEDPNYSPQRFPNAQRAFADDP :::::::::::::::::::::: gi|119 QEDPNYSPQRFPNAQRAFADDP 1120 1130 >>gi|179347|gb|AAA35587.1| HLA-B-associated transcript 3 (1132 aa) initn: 6451 init1: 6451 opt: 7608 Z-score: 5634.1 bits: 1054.4 E(): 0 Smith-Waterman score: 7608; 99.293% identity (99.293% similar) in 1132 aa overlap (62-1187:1-1132) 40 50 60 70 80 90 fk1160 DLGGAGSIASRSPNTIGETEVAVGGRDLSAMEPNDSTSTAVEEPDSLEVLVKTLDSQTRT :::::::::::::::::::::::::::::: gi|179 MEPNDSTSTAVEEPDSLEVLVKTLDSQTRT 10 20 30 100 110 120 130 140 150 fk1160 FIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPP :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: gi|179 FIVGAQMNVKEFKEHIRASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPP 40 50 60 70 80 90 160 170 180 190 200 210 fk1160 QTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 QTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVH 100 110 120 130 140 150 220 230 240 250 260 fk1160 INMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRME------CRGGPQPQHSQPPPQPPAVT :::::::::::::::::::::::::::::::::: :::::::::::::::::::: gi|179 INMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMETLPYLQCRGGPQPQHSQPPPQPPAVT 160 170 180 190 200 210 270 280 290 300 310 320 fk1160 PEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 PEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTPGPAPAGPTPAPETNAPNH 220 230 240 250 260 270 330 340 350 360 370 380 fk1160 PSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 PSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESL 280 290 300 310 320 330 390 400 410 420 430 440 fk1160 RLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 RLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGN 340 350 360 370 380 390 450 460 470 480 490 500 fk1160 GTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 GTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQS 400 410 420 430 440 450 510 520 530 540 550 560 fk1160 VEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 VEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPP 460 470 480 490 500 510 570 580 590 600 610 620 fk1160 QARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 QARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPAT 520 530 540 550 560 570 630 640 650 660 670 680 fk1160 ASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASP :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|179 ASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGPGVASP 580 590 600 610 620 630 690 700 710 720 730 740 fk1160 TITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 TITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGG 640 650 660 670 680 690 750 760 770 780 790 800 fk1160 LGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 LGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGF 700 710 720 730 740 750 810 820 830 840 850 860 fk1160 FGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATHT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 FGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATHT 760 770 780 790 800 810 870 880 890 900 910 920 fk1160 LITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELCN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 LITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELCN 820 830 840 850 860 870 930 940 950 960 970 980 fk1160 QGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 QGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHMP 880 890 900 910 920 930 990 1000 1010 1020 1030 1040 fk1160 VGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 VGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPP 940 950 960 970 980 990 1050 1060 1070 1080 1090 1100 fk1160 APEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 APEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKR 1000 1010 1020 1030 1040 1050 1110 1120 1130 1140 1150 1160 fk1160 RKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|179 RKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRL 1060 1070 1080 1090 1100 1110 1170 1180 fk1160 QEDPNYSPQRFPNAQRAFADDP :::::::::::::::::::::: gi|179 QEDPNYSPQRFPNAQRAFADDP 1120 1130 >>gi|194223333|ref|XP_001490565.2| PREDICTED: HLA-B asso (1122 aa) initn: 3191 init1: 3191 opt: 7346 Z-score: 5440.4 bits: 1018.6 E(): 0 Smith-Waterman score: 7346; 96.273% identity (98.403% similar) in 1127 aa overlap (62-1187:1-1122) 40 50 60 70 80 90 fk1160 DLGGAGSIASRSPNTIGETEVAVGGRDLSAMEPNDSTSTAVEEPDSLEVLVKTLDSQTRT :::::::::..::::::::::::::::::: gi|194 MEPNDSTSTTMEEPDSLEVLVKTLDSQTRT 10 20 30 100 110 120 130 140 150 fk1160 FIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPP 40 50 60 70 80 90 160 170 180 190 200 210 fk1160 QTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVH ::.::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|194 QTQLPSGASSGTGSASATHGGGPPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVH 100 110 120 130 140 150 220 230 240 250 260 270 fk1160 INMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGPQPQHSQPPPQPPAVTPEPVAL :::::::::::::::::::::::::::::::::::::: : :::::::: :.:.:::::: gi|194 INMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGSQAQHSQPPPQTPTVAPEPVAL 160 170 180 190 200 210 280 290 300 310 320 330 fk1160 SSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTP-GPAPAGPTPAPETNAPNHPSPAE ::::::::::::::::::::::::::::::.::::: ::::::::::::::.:::::::: gi|194 SSQTSEPVESEAPPREPMEAEEVEERAPAQSPELTPSGPAPAGPTPAPETNTPNHPSPAE 220 230 240 250 260 270 340 350 360 370 380 390 fk1160 YVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGESLRLLGN :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|194 YVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNQEGREEDQRLINLVGESLRLLGN 280 290 300 310 320 330 400 410 420 430 440 450 fk1160 TFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPP ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|194 TFVALSDLRCNLACAPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTGNGTRPP 340 350 360 370 380 390 460 470 480 490 500 510 fk1160 PTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQSVEPVV :.:::::::::::::::.:::::.::::.::::::::::::.:::::::::::::::::: gi|194 PAPNAEAPPPGPGQASSLAPSSTTVESSTEGAPPPGPAPPPTTSHPRVIRISHQSVEPVV 400 410 420 430 440 450 520 530 540 550 560 570 fk1160 MMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 MMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPS 460 470 480 490 500 510 580 590 600 610 620 630 fk1160 HPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASA :::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 HPGGPPVSGALQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPATASASA 520 530 540 550 560 570 640 650 660 670 680 690 fk1160 GTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVASPTITVA ::::::::::::::::::::: :: : :::::::::::::::::::.:: :.:::::::: gi|194 GTTNTATTAGPAPGGPAQPPP-PQTSTADLQFSQLLGNLLGPAGPGTGGPGMASPTITVA 580 590 600 610 620 700 710 720 730 740 750 fk1160 MPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGLGLES ::::::::::::::::: :::::::::::::::::::::::::::::::::: : :: gi|194 MPGVPAFLQGMTDFLQA----PPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPGGRGPES 630 640 650 660 670 680 760 770 780 790 800 810 fk1160 LSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGFFGALL : :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LPPEFYTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALGFFGALL 690 700 710 720 730 740 820 830 840 850 860 870 fk1160 SLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATHTLITGL ::::::::::::::::::::::::::::::::::::::::::::::.::: ::::::::: gi|194 SLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPGNIRTATHTLITGL 750 760 770 780 790 800 880 890 900 910 920 930 fk1160 EEYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELCNQGLFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EEYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELCNQGLFE 810 820 830 840 850 860 940 950 960 970 980 990 fk1160 CLALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHMPVGPDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 CLALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHMPVGPDA 870 880 890 900 910 920 1000 1010 1020 1030 1040 1050 fk1160 ILRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPPPAPEGG :::::::.::::::: ::::::::.::.:::::::::::::::::::::::::::::::: gi|194 ILRYVRRIGDPPQPLSEEPMEVQGSERTSPEPQRENASPAPGTTAEEAMSRGPPPAPEGG 930 940 950 960 970 980 1060 1070 1080 1090 1100 1110 fk1160 SRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAKRRKTMQ 990 1000 1010 1020 1030 1040 1120 1130 1140 1150 1160 1170 fk1160 GEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKRLQEDPN ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|194 GEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRADIQKRLQEDPN 1050 1060 1070 1080 1090 1100 1180 fk1160 YSPQRFPNAQRAFADDP :::::::::.::::::: gi|194 YSPQRFPNAHRAFADDP 1110 1120 >>gi|194223335|ref|XP_001490615.2| PREDICTED: HLA-B asso (1128 aa) initn: 4356 init1: 3191 opt: 7324 Z-score: 5424.1 bits: 1015.6 E(): 0 Smith-Waterman score: 7324; 95.763% identity (97.882% similar) in 1133 aa overlap (62-1187:1-1128) 40 50 60 70 80 90 fk1160 DLGGAGSIASRSPNTIGETEVAVGGRDLSAMEPNDSTSTAVEEPDSLEVLVKTLDSQTRT :::::::::..::::::::::::::::::: gi|194 MEPNDSTSTTMEEPDSLEVLVKTLDSQTRT 10 20 30 100 110 120 130 140 150 fk1160 FIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FIVGAQMNVKEFKEHIAASVSIPSEKQRLIYQGRVLQDDKKLQEYNVGGKVIHLVERAPP 40 50 60 70 80 90 160 170 180 190 200 210 fk1160 QTHLPSGASSGTGSASATHGGGSPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVH ::.::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|194 QTQLPSGASSGTGSASATHGGGPPPGTRGPGASVHDRNANSYVMVGTFNLPSDGSAVDVH 100 110 120 130 140 150 220 230 240 250 260 fk1160 INMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRME------CRGGPQPQHSQPPPQPPAVT :::::::::::::::::::::::::::::::::: :::: : :::::::: :.:. gi|194 INMEQAPIQSEPRVRLVMAQHMIRDIQTLLSRMETLPHLQCRGGSQAQHSQPPPQTPTVA 160 170 180 190 200 210 270 280 290 300 310 320 fk1160 PEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQNPELTP-GPAPAGPTPAPETNAPN ::::::::::::::::::::::::::::::::::::.::::: ::::::::::::::.:: gi|194 PEPVALSSQTSEPVESEAPPREPMEAEEVEERAPAQSPELTPSGPAPAGPTPAPETNTPN 220 230 240 250 260 270 330 340 350 360 370 380 fk1160 HPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNHEGREEDQRLINLVGES :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|194 HPSPAEYVEVLQELQRLESRLQPFLQRYYEVLGAAATTDYNNNQEGREEDQRLINLVGES 280 290 300 310 320 330 390 400 410 420 430 440 fk1160 LRLLGNTFVALSDLRCNLACTPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTG ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|194 LRLLGNTFVALSDLRCNLACAPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTG 340 350 360 370 380 390 450 460 470 480 490 500 fk1160 NGTRPPPTPNAEAPPPGPGQASSVAPSSTNVESSAEGAPPPGPAPPPATSHPRVIRISHQ :::::::.:::::::::::::::.:::::.::::.::::::::::::.:::::::::::: gi|194 NGTRPPPAPNAEAPPPGPGQASSLAPSSTTVESSTEGAPPPGPAPPPTTSHPRVIRISHQ 400 410 420 430 440 450 510 520 530 540 550 560 fk1160 SVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SVEPVVMMHMNIQDSGTQPGGVPSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTP 460 470 480 490 500 510 570 580 590 600 610 620 fk1160 PQARPSHPGGPPVSGTLQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPA :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|194 PQARPSHPGGPPVSGALQGAGLGTNASLAQMVSGLVGQLLMQPVLVAQGTPGMAPPPAPA 520 530 540 550 560 570 630 640 650 660 670 680 fk1160 TASASAGTTNTATTAGPAPGGPAQPPPTPQPSMADLQFSQLLGNLLGPAGPGAGGSGVAS ::::::::::::::::::::::::::: :: : :::::::::::::::::::.:: :.:: gi|194 TASASAGTTNTATTAGPAPGGPAQPPP-PQTSTADLQFSQLLGNLLGPAGPGTGGPGMAS 580 590 600 610 620 690 700 710 720 730 740 fk1160 PTITVAMPGVPAFLQGMTDFLQATQTAPPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPG ::::::::::::::::::::::: ::::::::::::::::::::::::::::::::: gi|194 PTITVAMPGVPAFLQGMTDFLQA----PPPPPPPPPPPPAPEQQTMPPPGSPSGGAGSPG 630 640 650 660 670 680 750 760 770 780 790 800 fk1160 GLGLESLSPEFFTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALG : : ::: :::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|194 GRGPESLPPEFYTSVVQGVLSSLLGSLGARAGSSESIAAFIQRLSGSSNIFEPGADGALG 690 700 710 720 730 740 810 820 830 840 850 860 fk1160 FFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPSNIRMATH ::::::::::::::::::::::::::::::::::::::::::::::::::::.::: ::: gi|194 FFGALLSLLCQNFSMVDVVMLLHGHFQPLQRLQPQLRSFFHQHYLGGQEPTPGNIRTATH 750 760 770 780 790 800 870 880 890 900 910 920 fk1160 TLITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TLITGLEEYVRESFSLVQVQPGVDIIRTNLEFLQEQFNSIAAHVLHCTDSGFGARLLELC 810 820 830 840 850 860 930 940 950 960 970 980 fk1160 NQGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NQGLFECLALNLHCLGGQQMELAAVINGRIRRMSRGVNPSLVSWLTTMMGLRLQVVLEHM 870 880 890 900 910 920 990 1000 1010 1020 1030 1040 fk1160 PVGPDAILRYVRRVGDPPQPLPEEPMEVQGAERASPEPQRENASPAPGTTAEEAMSRGPP :::::::::::::.::::::: ::::::::.::.:::::::::::::::::::::::::: gi|194 PVGPDAILRYVRRIGDPPQPLSEEPMEVQGSERTSPEPQRENASPAPGTTAEEAMSRGPP 930 940 950 960 970 980 1050 1060 1070 1080 1090 1100 fk1160 PAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PAPEGGSRDEQDGASAETEPWAAAVPPEWVPIIQQDIQSQRKVKPQPPLSDAYLSGMPAK 990 1000 1010 1020 1030 1040 1110 1120 1130 1140 1150 1160 fk1160 RRKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRSDIQKR ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|194 RRKTMQGEGPQLLLSEAVSRAAKAAGARPLTSPESLSRDLEAPEVQESYRQQLRADIQKR 1050 1060 1070 1080 1090 1100 1170 1180 fk1160 LQEDPNYSPQRFPNAQRAFADDP :::::::::::::::.::::::: gi|194 LQEDPNYSPQRFPNAHRAFADDP 1110 1120 1187 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Thu Jun 18 13:00:11 2009 done: Thu Jun 18 13:03:10 2009 Total Scan time: 1523.800 Total Display time: 0.850 Function used was FASTA [version 34.26.5 April 26, 2007]