hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-11454984/chunk_1/iprscan-20080811-11454984.nocrc
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Query sequence: fk12443
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00613                                                 121.1    1.2e-31   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00613    1/1      58   150 ..     1    98 []   121.1  1.2e-31

Alignments of top-scoring domains:
SM00613: domain 1 of 1, from 58 to 150: score 121.1, E = 1.2e-31
                   *->esgeNYvkFtYDIisntYSHtneDGSpvqPyen.VkNiERvvdrskf
                      e+++++++++Y+I++++Y +++++++ ++ +en+V+++E ++++   
     fk12443    58    EKISKQLHLCYNIVKDRYVRVSNNNQTISGWENgVWKMESIFRK--- 101  

                   ifrVelnevYlhkkrpeeegignIyWkFdlkstGKsVeKvvIrmsGieei
                      Ve+++++++++r+e++++++I+WkF++ s+G++V++++Ir+s+++++
     fk12443   102 ---VETDWHMVYLARKEGSSFAYISWKFECGSVGLKVDSISIRTSSQTFQ 148  

                   an<-*
                   ++   
     fk12443   149 TG    150  

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