hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-12103434/chunk_1/iprscan-20080811-12103434.nocrc
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Query sequence: fk12713
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00233                                                  39.6    4.3e-07   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00233     1/1      94   190 ..     1    82 []    39.6  4.3e-07

Alignments of top-scoring domains:
SM00233: domain 1 of 1, from 94 to 190: score 39.6, E = 4.3e-07
                   *->vikeGwLlkks...k.swkkryfvLfngvLlyyksk......kpkgs
                        +eG++lkk + ++++w+kr+fvL+ng+L y k + + +++k  gs
     fk12713    94    DKHEGFMLKKRkwpLkGWHKRFFVLDNGMLKYSKAPldiqkgKVHGS 140  

                   ipLsgcsvre.p...cFeivt.drtlllqAeseeereeWvealqsaiaka
                   i++     + +++ + + + t+++ ++l+ +s++ ++ Wv+ l+ +    
     fk12713   141 IDVGLSVMSIkKkarRIDLDTeEHIYHLKVKSQDWFDAWVSKLRHHRLYR 190  

                   <-*
                      
     fk12713     -     -    

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