hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-12273158/chunk_1/iprscan-20080811-12273158.nocrc
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Query sequence: fk12931
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
SM00191                                                  37.7    1.5e-06   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
SM00191         1/1      42    93 ..     1    56 []    37.7  1.5e-06

Alignments of top-scoring domains:
SM00191: domain 1 of 1, from 42 to 93: score 37.7, E = 1.5e-06
                   *->pgsyFGysvagvgDlngDksGypDlllvGAPr.GaVYvyfgssnsgg
                       gs FG+s+ g++D++ +  GypD l+vGA +  +V vy+ ++    
     fk12931    42    TGSAFGFSLRGAVDIDDN--GYPD-LIVGAYGaNQVAVYRAQPV--V 83   

                   grciplqnls<-*
                     + +l +     
     fk12931    84 KASVQLLVQD    93   

//