# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofk13033.fasta.nr -Q fk13033.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fk13033, 70 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6842836 sequences Expectation_n fit: rho(ln(x))= 4.5847+/-0.000177; mu= 5.0696+/- 0.010 mean_var=51.6962+/-10.183, 0's: 60 Z-trim: 64 B-trim: 0 in 0/66 Lambda= 0.178379 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|1730222|sp|P50151.1|GBG10_HUMAN Guanine nucleot ( 68) 436 119.0 5e-26 gi|74267834|gb|AAI03020.1| GNG10 protein [Bos taur ( 68) 431 117.7 1.2e-25 gi|119588983|gb|EAW68577.1| hCG1992840, isoform CR ( 68) 426 116.4 3e-25 gi|52782844|sp|Q9CXP8.1|GBG10_MOUSE Guanine nucleo ( 68) 422 115.4 6.1e-25 gi|109094123|ref|XP_001088802.1| PREDICTED: simila ( 68) 411 112.5 4.3e-24 gi|114657279|ref|XP_001172428.1| PREDICTED: simila ( 68) 409 112.0 6.2e-24 gi|149642265|ref|XP_001510814.1| PREDICTED: simila ( 68) 407 111.5 8.8e-24 gi|126334074|ref|XP_001365858.1| PREDICTED: simila ( 68) 401 110.0 2.6e-23 gi|118104456|ref|XP_001232886.1| PREDICTED: hypoth ( 285) 396 109.1 2e-22 gi|38014660|gb|AAH60422.1| MGC68728 protein [Xenop ( 68) 386 106.1 3.7e-22 gi|189519840|ref|XP_001923216.1| PREDICTED: simila ( 68) 339 94.0 1.6e-18 gi|15929934|gb|AAH15391.1| Hypothetical protein LO ( 153) 294 82.6 9.7e-15 gi|114626162|ref|XP_001148273.1| PREDICTED: hypoth ( 153) 294 82.6 9.7e-15 gi|30585007|gb|AAP36776.1| Homo sapiens guanine nu ( 154) 294 82.6 9.8e-15 gi|71089967|gb|AAZ23838.1| guanine nucleotide bind ( 41) 271 76.4 2e-13 gi|47223858|emb|CAG06035.1| unnamed protein produc ( 71) 273 77.0 2.2e-13 gi|194669052|ref|XP_001789543.1| PREDICTED: simila ( 68) 265 75.0 8.8e-13 gi|52783583|sp|P63219.1|GBG5_RAT Guanine nucleotid ( 68) 264 74.7 1.1e-12 gi|30584425|gb|AAP36465.1| Homo sapiens guanine nu ( 69) 264 74.7 1.1e-12 gi|126306121|ref|XP_001362430.1| PREDICTED: simila ( 68) 261 73.9 1.8e-12 gi|148703787|gb|EDL35734.1| mCG50746 [Mus musculus ( 68) 259 73.4 2.6e-12 gi|149597590|ref|XP_001511064.1| PREDICTED: simila ( 68) 259 73.4 2.6e-12 gi|149266660|ref|XP_001476377.1| PREDICTED: simila ( 68) 258 73.2 3.1e-12 gi|37681817|gb|AAQ97786.1| guanine nucleotide bind ( 68) 257 72.9 3.7e-12 gi|89273841|emb|CAJ81829.1| guanine nucleotide bin ( 68) 257 72.9 3.7e-12 gi|110645432|gb|AAI18883.1| MGC147156 protein [Xen ( 68) 256 72.6 4.4e-12 gi|50416410|gb|AAH77778.1| MGC80106 protein [Xenop ( 68) 255 72.4 5.3e-12 gi|149636848|ref|XP_001509153.1| PREDICTED: simila ( 72) 255 72.4 5.5e-12 gi|49257431|gb|AAH73594.1| MGC82895 protein [Xenop ( 68) 254 72.1 6.3e-12 gi|126322797|ref|XP_001362524.1| PREDICTED: simila ( 72) 254 72.1 6.6e-12 gi|47223020|emb|CAG07107.1| unnamed protein produc ( 68) 253 71.9 7.5e-12 gi|28703944|gb|AAH47249.1| Gng7-A protein [Xenopus ( 68) 252 71.6 9e-12 gi|49522728|gb|AAH71143.1| MGC82380 protein [Xenop ( 68) 252 71.6 9e-12 gi|126323527|ref|XP_001364708.1| PREDICTED: simila ( 68) 251 71.4 1.1e-11 gi|149248947|ref|XP_001477223.1| PREDICTED: simila ( 68) 251 71.4 1.1e-11 gi|118094380|ref|XP_422375.2| PREDICTED: similar t ( 68) 250 71.1 1.3e-11 gi|385168|gb|AAA65640.1| G-protein gamma subunit ( 69) 250 71.1 1.3e-11 gi|149633981|ref|XP_001507385.1| PREDICTED: simila ( 68) 249 70.8 1.5e-11 gi|232148|sp|P30671.1|GBG7_BOVIN Guanine nucleotid ( 68) 249 70.8 1.5e-11 gi|52788203|sp|P43425.2|GBG7_RAT Guanine nucleotid ( 68) 249 70.8 1.5e-11 gi|49900665|gb|AAH76189.1| Guanine nucleotide bind ( 68) 249 70.8 1.5e-11 gi|6016106|sp|O60262.1|GBG7_HUMAN Guanine nucleoti ( 68) 249 70.8 1.5e-11 gi|109131914|ref|XP_001093774.1| PREDICTED: simila ( 126) 250 71.3 2.1e-11 gi|12229849|sp|Q9Y3K8.1|GBG5L_HUMAN Putative guani ( 68) 247 70.3 2.2e-11 gi|47225735|emb|CAG08078.1| unnamed protein produc ( 68) 247 70.3 2.2e-11 gi|187955562|gb|AAI47109.1| Predicted gene, EG4360 ( 72) 246 70.1 2.7e-11 gi|114689835|ref|XP_001143017.1| PREDICTED: hypoth ( 99) 247 70.4 3e-11 gi|149756852|ref|XP_001504939.1| PREDICTED: simila ( 72) 245 69.8 3.3e-11 gi|47229899|emb|CAG10313.1| unnamed protein produc ( 68) 244 69.6 3.7e-11 gi|148699523|gb|EDL31470.1| guanine nucleotide bin ( 69) 244 69.6 3.8e-11 >>gi|1730222|sp|P50151.1|GBG10_HUMAN Guanine nucleotide- (68 aa) initn: 436 init1: 436 opt: 436 Z-score: 622.4 bits: 119.0 E(): 5e-26 Smith-Waterman score: 436; 100.000% identity (100.000% similar) in 68 aa overlap (3-70:1-68) 10 20 30 40 50 60 fk1303 AAMSSGASASALQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|173 MSSGASASALQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNP 10 20 30 40 50 70 fk1303 FREPRSCALL :::::::::: gi|173 FREPRSCALL 60 >>gi|74267834|gb|AAI03020.1| GNG10 protein [Bos taurus] (68 aa) initn: 431 init1: 431 opt: 431 Z-score: 615.5 bits: 117.7 E(): 1.2e-25 Smith-Waterman score: 431; 98.529% identity (100.000% similar) in 68 aa overlap (3-70:1-68) 10 20 30 40 50 60 fk1303 AAMSSGASASALQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNP ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 MSSGASVSALQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNP 10 20 30 40 50 70 fk1303 FREPRSCALL :::::::::: gi|742 FREPRSCALL 60 >>gi|119588983|gb|EAW68577.1| hCG1992840, isoform CRA_a (68 aa) initn: 426 init1: 426 opt: 426 Z-score: 608.5 bits: 116.4 E(): 3e-25 Smith-Waterman score: 426; 98.529% identity (98.529% similar) in 68 aa overlap (3-70:1-68) 10 20 30 40 50 60 fk1303 AAMSSGASASALQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNP ::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|119 MSSGASASALQLLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNP 10 20 30 40 50 70 fk1303 FREPRSCALL :::::::::: gi|119 FREPRSCALL 60 >>gi|52782844|sp|Q9CXP8.1|GBG10_MOUSE Guanine nucleotide (68 aa) initn: 422 init1: 422 opt: 422 Z-score: 603.0 bits: 115.4 E(): 6.1e-25 Smith-Waterman score: 422; 95.588% identity (100.000% similar) in 68 aa overlap (3-70:1-68) 10 20 30 40 50 60 fk1303 AAMSSGASASALQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNP ::::::.::::::::::::::::::::::::::::::::.:::::::::.:::::::: gi|527 MSSGASVSALQRLVEQLKLEAGVERIKVSQAAAELQQYCIQNACKDALLLGVPAGSNP 10 20 30 40 50 70 fk1303 FREPRSCALL :::::::::: gi|527 FREPRSCALL 60 >>gi|109094123|ref|XP_001088802.1| PREDICTED: similar to (68 aa) initn: 411 init1: 411 opt: 411 Z-score: 587.7 bits: 112.5 E(): 4.3e-24 Smith-Waterman score: 411; 94.118% identity (98.529% similar) in 68 aa overlap (3-70:1-68) 10 20 30 40 50 60 fk1303 AAMSSGASASALQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNP :::.:::::::.::::::::::.::::: ::::::::::::::::::::::::::::: gi|109 MSSSASASALQHLVEQLKLEAGMERIKVPQAAAELQQYCMQNACKDALLVGVPAGSNP 10 20 30 40 50 70 fk1303 FREPRSCALL :::::::::: gi|109 FREPRSCALL 60 >>gi|114657279|ref|XP_001172428.1| PREDICTED: similar to (68 aa) initn: 409 init1: 409 opt: 409 Z-score: 584.9 bits: 112.0 E(): 6.2e-24 Smith-Waterman score: 409; 95.588% identity (97.059% similar) in 68 aa overlap (3-70:1-68) 10 20 30 40 50 60 fk1303 AAMSSGASASALQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNP ::::::::::: ::::::::::::::.::::::::::::::::::::::::::::::: gi|114 MSSGASASALQCLVEQLKLEAGVERINVSQAAAELQQYCMQNACKDALLVGVPAGSNP 10 20 30 40 50 70 fk1303 FREPRSCALL : :::::::: gi|114 FWEPRSCALL 60 >>gi|149642265|ref|XP_001510814.1| PREDICTED: similar to (68 aa) initn: 407 init1: 407 opt: 407 Z-score: 582.1 bits: 111.5 E(): 8.8e-24 Smith-Waterman score: 407; 91.176% identity (98.529% similar) in 68 aa overlap (3-70:1-68) 10 20 30 40 50 60 fk1303 AAMSSGASASALQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNP :::... :..:::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MSSNSNLSSMQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNP 10 20 30 40 50 70 fk1303 FREPRSCALL :::::::::: gi|149 FREPRSCALL 60 >>gi|126334074|ref|XP_001365858.1| PREDICTED: similar to (68 aa) initn: 401 init1: 401 opt: 401 Z-score: 573.8 bits: 110.0 E(): 2.6e-23 Smith-Waterman score: 401; 89.706% identity (98.529% similar) in 68 aa overlap (3-70:1-68) 10 20 30 40 50 60 fk1303 AAMSSGASASALQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNP :::... :..:::::::::::::::::::::::::::::::::::::::::::::::: gi|126 MSSSSNLSTMQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNP 10 20 30 40 50 70 fk1303 FREPRSCALL :::::::.:: gi|126 FREPRSCVLL 60 >>gi|118104456|ref|XP_001232886.1| PREDICTED: hypothetic (285 aa) initn: 396 init1: 396 opt: 396 Z-score: 557.7 bits: 109.1 E(): 2e-22 Smith-Waterman score: 396; 89.706% identity (98.529% similar) in 68 aa overlap (3-70:218-285) 10 20 30 fk1303 AAMSSGASASALQRLVEQLKLEAGVERIKVSQ :::..: :..:::::::::::.:::::::: gi|118 RCRQSRAEPSRAEPSRAEPRSAVPFLPVPVMSSAGSLSTMQRLVEQLKLEAAVERIKVSQ 190 200 210 220 230 240 40 50 60 70 fk1303 AAAELQQYCMQNACKDALLVGVPAGSNPFREPRSCALL :::::::::::::::::::::::::::::::::::.:: gi|118 AAAELQQYCMQNACKDALLVGVPAGSNPFREPRSCTLL 250 260 270 280 >>gi|38014660|gb|AAH60422.1| MGC68728 protein [Xenopus l (68 aa) initn: 386 init1: 386 opt: 386 Z-score: 552.9 bits: 106.1 E(): 3.7e-22 Smith-Waterman score: 386; 85.294% identity (98.529% similar) in 68 aa overlap (3-70:1-68) 10 20 30 40 50 60 fk1303 AAMSSGASASALQRLVEQLKLEAGVERIKVSQAAAELQQYCMQNACKDALLVGVPAGSNP :::... :..::.::::.:::.:::::::::::::::::::::::::::::.:::::: gi|380 MSSNSNFSTMQRVVEQLRLEASVERIKVSQAAAELQQYCMQNACKDALLVGMPAGSNP 10 20 30 40 50 70 fk1303 FREPRSCALL :::::::::: gi|380 FREPRSCALL 60 70 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Mon Aug 11 12:30:42 2008 done: Mon Aug 11 12:34:01 2008 Total Scan time: 434.190 Total Display time: 0.010 Function used was FASTA [version 34.26.5 April 26, 2007]