# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofk13225.fasta.nr -Q fk13225.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fk13225, 809 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8978465 sequences Expectation_n fit: rho(ln(x))= 5.6728+/-0.000195; mu= 11.6421+/- 0.011 mean_var=97.3742+/-19.114, 0's: 27 Z-trim: 52 B-trim: 1007 in 2/65 Lambda= 0.129973 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|112927|sp|P05067.3|A4_HUMAN RecName: Full=Amylo ( 770) 5160 978.4 0 gi|61211285|sp|Q5IS80.1|A4_PANTR RecName: Full=Amy ( 770) 5155 977.4 0 gi|28558768|sp|P53601.3|A4_MACFA RecName: Full=Amy ( 770) 5136 973.9 0 gi|30179764|sp|P79307.2|A4_PIG RecName: Full=Amylo ( 770) 5058 959.3 0 gi|30172731|sp|Q60495.2|A4_CAVPO RecName: Full=Amy ( 770) 5026 953.3 0 gi|40950172|gb|AAR97726.1| beta amyloid precursor ( 770) 5015 951.2 0 gi|112930|sp|P08592.2|A4_RAT RecName: Full=Amyloid ( 770) 5000 948.4 0 gi|62363233|gb|AAX81908.1| beta-amyloid precursor ( 770) 4998 948.0 0 gi|30385620|gb|AAP23169.1| amyloid-beta precursor ( 770) 4989 946.3 0 gi|30581015|sp|P12023.3|A4_MOUSE RecName: Full=Amy ( 770) 4984 945.4 0 gi|209915573|ref|NP_001129602.1| amyloid beta A4 p ( 714) 4648 882.4 0 gi|194377586|dbj|BAG57741.1| unnamed protein produ ( 714) 4642 881.2 0 gi|62363241|gb|AAX81912.1| beta-amyloid precursor ( 749) 4144 787.9 0 gi|74198291|dbj|BAE35313.1| unnamed protein produc ( 752) 4142 787.5 0 gi|74192834|dbj|BAE34927.1| unnamed protein produc ( 752) 4065 773.1 0 gi|13529548|gb|AAH05490.1| App protein [Mus muscul ( 607) 3884 739.0 1.5e-210 gi|74213469|dbj|BAE35547.1| unnamed protein produc ( 582) 3666 698.1 2.9e-198 gi|178615|gb|AAB59501.1| amyloid-beta protein [Hom ( 547) 3613 688.2 2.7e-195 gi|62363237|gb|AAX81910.1| beta-amyloid precursor ( 714) 2721 521.0 7.5e-145 gi|67971130|dbj|BAE01907.1| unnamed protein produc ( 751) 2675 512.4 3.1e-142 gi|194380694|dbj|BAG58500.1| unnamed protein produ ( 746) 2674 512.2 3.5e-142 gi|28721|emb|CAA30050.1| amyloid A4 protein [Homo ( 751) 2674 512.2 3.5e-142 gi|3912955|sp|Q95241.1|A4_SAISC RecName: Full=Amyl ( 751) 2670 511.5 5.9e-142 gi|194226159|ref|XP_001499900.2| PREDICTED: simila ( 751) 2665 510.5 1.1e-141 gi|62363235|gb|AAX81909.1| beta-amyloid precursor ( 751) 2659 509.4 2.4e-141 gi|82542245|gb|ABB82034.1| amyloid precursor prote ( 751) 2658 509.2 2.8e-141 gi|40950176|gb|AAR97728.1| beta amyloid precursor ( 751) 2657 509.0 3.2e-141 gi|226343|prf||1507304B beta amyloid peptide precu ( 574) 2653 508.2 4.4e-141 gi|33339674|gb|AAQ14327.1| amyloid precursor prote ( 639) 2653 508.2 4.7e-141 gi|871360|emb|CAA31830.1| A4 amyloid protein precu ( 695) 2653 508.3 5e-141 gi|28526|emb|CAA68374.1| unnamed protein product [ ( 695) 2653 508.3 5e-141 gi|189473445|gb|ACD99694.1| N-EGFP/amyloid beta pr ( 941) 2653 508.4 6.3e-141 gi|226342|prf||1507304A beta amyloid peptide precu ( 412) 2647 506.9 7.5e-141 gi|194385154|dbj|BAG60983.1| unnamed protein produ ( 680) 2649 507.5 8.4e-141 gi|194386962|dbj|BAG59847.1| unnamed protein produ ( 622) 2648 507.3 8.9e-141 gi|55733523|emb|CAH93439.1| hypothetical protein [ ( 695) 2646 506.9 1.3e-140 gi|178540|gb|AAA51722.1| amyloid beta-protein prec ( 412) 2641 505.8 1.6e-140 gi|1418676|emb|CAA66230.1| putative amyloid precur ( 695) 2643 506.4 1.9e-140 gi|82542243|gb|ABB82033.1| amyloid precursor prote ( 695) 2642 506.2 2.1e-140 gi|40950174|gb|AAR97727.1| beta amyloid precursor ( 695) 2641 506.0 2.4e-140 gi|194382392|dbj|BAG58951.1| unnamed protein produ ( 660) 2639 505.6 3e-140 gi|62363239|gb|AAX81911.1| beta-amyloid precursor ( 695) 2638 505.4 3.5e-140 gi|115305312|gb|AAI23414.1| Amyloid beta (A4) prec ( 695) 2635 504.9 5.2e-140 gi|3282749|gb|AAC25052.1| amyloid precursor protei ( 534) 2630 503.8 8.3e-140 gi|9837545|gb|AAG00593.1|AF289218_1 beta-amyloid p ( 695) 2630 503.9 1e-139 gi|9837547|gb|AAG00594.1|AF289219_1 beta-amyloid p ( 751) 2630 504.0 1.1e-139 gi|47125510|gb|AAH70409.1| Amyloid beta (A4) precu ( 695) 2615 501.1 7e-139 gi|55617|emb|CAA30488.1| unnamed protein product [ ( 695) 2611 500.4 1.2e-138 gi|1805299|gb|AAB41502.1| hippocampal amyloid prec ( 695) 2610 500.2 1.3e-138 gi|194386296|dbj|BAG59712.1| unnamed protein produ ( 528) 2599 498.0 4.6e-138 >>gi|112927|sp|P05067.3|A4_HUMAN RecName: Full=Amyloid b (770 aa) initn: 5160 init1: 5160 opt: 5160 Z-score: 5229.1 bits: 978.4 E(): 0 Smith-Waterman score: 5160; 100.000% identity (100.000% similar) in 770 aa overlap (40-809:1-770) 10 20 30 40 50 60 fk1322 ETAAVAARAEQGRGGSHSHSSALGAPRRVAMLPGLALLLLAAWTARALEVPTDGNAGLLA :::::::::::::::::::::::::::::: gi|112 MLPGLALLLLAAWTARALEVPTDGNAGLLA 10 20 30 70 80 90 100 110 120 fk1322 EPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 EPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQ 40 50 60 70 80 90 130 140 150 160 170 180 fk1322 PVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 PVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW 100 110 120 130 140 150 190 200 210 220 230 240 fk1322 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWW 160 170 180 190 200 210 250 260 270 280 290 300 fk1322 GGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 GGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTT 220 230 240 250 260 270 310 320 330 340 350 360 fk1322 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN 280 290 300 310 320 330 370 380 390 400 410 420 fk1322 FDTEEYCMAVCGSAMSQSLLKTTQEPLARDPVKLPTTAASTPDAVDKYLETPGDENEHAH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 FDTEEYCMAVCGSAMSQSLLKTTQEPLARDPVKLPTTAASTPDAVDKYLETPGDENEHAH 340 350 360 370 380 390 430 440 450 460 470 480 fk1322 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER 400 410 420 430 440 450 490 500 510 520 530 540 fk1322 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK 460 470 480 490 500 510 550 560 570 580 590 600 fk1322 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ 520 530 540 550 560 570 610 620 630 640 650 660 fk1322 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVP 580 590 600 610 620 630 670 680 690 700 710 720 fk1322 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF 640 650 660 670 680 690 730 740 750 760 770 780 fk1322 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS 700 710 720 730 740 750 790 800 fk1322 KMQQNGYENPTYKFFEQMQN :::::::::::::::::::: gi|112 KMQQNGYENPTYKFFEQMQN 760 770 >>gi|61211285|sp|Q5IS80.1|A4_PANTR RecName: Full=Amyloid (770 aa) initn: 5155 init1: 5155 opt: 5155 Z-score: 5224.0 bits: 977.4 E(): 0 Smith-Waterman score: 5155; 99.870% identity (100.000% similar) in 770 aa overlap (40-809:1-770) 10 20 30 40 50 60 fk1322 ETAAVAARAEQGRGGSHSHSSALGAPRRVAMLPGLALLLLAAWTARALEVPTDGNAGLLA :::::::::::::::::::::::::::::: gi|612 MLPGLALLLLAAWTARALEVPTDGNAGLLA 10 20 30 70 80 90 100 110 120 fk1322 EPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 EPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQ 40 50 60 70 80 90 130 140 150 160 170 180 fk1322 PVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 PVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW 100 110 120 130 140 150 190 200 210 220 230 240 fk1322 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWW 160 170 180 190 200 210 250 260 270 280 290 300 fk1322 GGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 GGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTT 220 230 240 250 260 270 310 320 330 340 350 360 fk1322 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN 280 290 300 310 320 330 370 380 390 400 410 420 fk1322 FDTEEYCMAVCGSAMSQSLLKTTQEPLARDPVKLPTTAASTPDAVDKYLETPGDENEHAH :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|612 FDTEEYCMAVCGSVMSQSLLKTTQEPLARDPVKLPTTAASTPDAVDKYLETPGDENEHAH 340 350 360 370 380 390 430 440 450 460 470 480 fk1322 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER 400 410 420 430 440 450 490 500 510 520 530 540 fk1322 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK 460 470 480 490 500 510 550 560 570 580 590 600 fk1322 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ 520 530 540 550 560 570 610 620 630 640 650 660 fk1322 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVP 580 590 600 610 620 630 670 680 690 700 710 720 fk1322 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF 640 650 660 670 680 690 730 740 750 760 770 780 fk1322 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|612 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS 700 710 720 730 740 750 790 800 fk1322 KMQQNGYENPTYKFFEQMQN :::::::::::::::::::: gi|612 KMQQNGYENPTYKFFEQMQN 760 770 >>gi|28558768|sp|P53601.3|A4_MACFA RecName: Full=Amyloid (770 aa) initn: 5136 init1: 5136 opt: 5136 Z-score: 5204.8 bits: 973.9 E(): 0 Smith-Waterman score: 5136; 99.481% identity (99.870% similar) in 770 aa overlap (40-809:1-770) 10 20 30 40 50 60 fk1322 ETAAVAARAEQGRGGSHSHSSALGAPRRVAMLPGLALLLLAAWTARALEVPTDGNAGLLA :::::::::::::::::::::::::::::: gi|285 MLPGLALLLLAAWTARALEVPTDGNAGLLA 10 20 30 70 80 90 100 110 120 fk1322 EPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 EPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQ 40 50 60 70 80 90 130 140 150 160 170 180 fk1322 PVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 PVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW 100 110 120 130 140 150 190 200 210 220 230 240 fk1322 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWW 160 170 180 190 200 210 250 260 270 280 290 300 fk1322 GGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 GGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTT 220 230 240 250 260 270 310 320 330 340 350 360 fk1322 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN 280 290 300 310 320 330 370 380 390 400 410 420 fk1322 FDTEEYCMAVCGSAMSQSLLKTTQEPLARDPVKLPTTAASTPDAVDKYLETPGDENEHAH :::::::::::::.::::: :::.:::.:::::::::::::::::::::::::::::::: gi|285 FDTEEYCMAVCGSVMSQSLRKTTREPLTRDPVKLPTTAASTPDAVDKYLETPGDENEHAH 340 350 360 370 380 390 430 440 450 460 470 480 fk1322 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER 400 410 420 430 440 450 490 500 510 520 530 540 fk1322 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK 460 470 480 490 500 510 550 560 570 580 590 600 fk1322 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ 520 530 540 550 560 570 610 620 630 640 650 660 fk1322 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVP 580 590 600 610 620 630 670 680 690 700 710 720 fk1322 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF 640 650 660 670 680 690 730 740 750 760 770 780 fk1322 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|285 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS 700 710 720 730 740 750 790 800 fk1322 KMQQNGYENPTYKFFEQMQN :::::::::::::::::::: gi|285 KMQQNGYENPTYKFFEQMQN 760 770 >>gi|30179764|sp|P79307.2|A4_PIG RecName: Full=Amyloid b (770 aa) initn: 5058 init1: 5058 opt: 5058 Z-score: 5125.7 bits: 959.3 E(): 0 Smith-Waterman score: 5058; 97.792% identity (99.351% similar) in 770 aa overlap (40-809:1-770) 10 20 30 40 50 60 fk1322 ETAAVAARAEQGRGGSHSHSSALGAPRRVAMLPGLALLLLAAWTARALEVPTDGNAGLLA :::::::.:::::::::::::::::::::: gi|301 MLPGLALVLLAAWTARALEVPTDGNAGLLA 10 20 30 70 80 90 100 110 120 fk1322 EPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQ :::.:::::.::::::::::::.:::::::::: :::::::::::::::::::::::::: gi|301 EPQVAMFCGKLNMHMNVQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQ 40 50 60 70 80 90 130 140 150 160 170 180 fk1322 PVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW ::::::::::.::::::: :.::::::::::::::::::::::::::::::::::::::: gi|301 PVTIQNWCKRSRKQCKTHTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW 100 110 120 130 140 150 190 200 210 220 230 240 fk1322 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWW :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|301 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNIDSADAEEDDSDVWW 160 170 180 190 200 210 250 260 270 280 290 300 fk1322 GGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTT :::::::::::::::::::::::::.::::::.::::::::::::::::::::::::::: gi|301 GGADTDYADGSEDKVVEVAEEEEVADVEEEEAEDDEDDEDGDEVEEEAEEPYEEATERTT 220 230 240 250 260 270 310 320 330 340 350 360 fk1322 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN 280 290 300 310 320 330 370 380 390 400 410 420 fk1322 FDTEEYCMAVCGSAMSQSLLKTTQEPLARDPVKLPTTAASTPDAVDKYLETPGDENEHAH :::::::::::::.::::::::::: : .::::::::::::::::::::::::::::::: gi|301 FDTEEYCMAVCGSVMSQSLLKTTQEHLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAH 340 350 360 370 380 390 430 440 450 460 470 480 fk1322 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER 400 410 420 430 440 450 490 500 510 520 530 540 fk1322 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK 460 470 480 490 500 510 550 560 570 580 590 600 fk1322 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ 520 530 540 550 560 570 610 620 630 640 650 660 fk1322 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVP :::::::::::::::::::::::::::::::::::::::::::::::::::: ::.:::: gi|301 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVP 580 590 600 610 620 630 670 680 690 700 710 720 fk1322 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF 640 650 660 670 680 690 730 740 750 760 770 780 fk1322 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS 700 710 720 730 740 750 790 800 fk1322 KMQQNGYENPTYKFFEQMQN :::::::::::::::::::: gi|301 KMQQNGYENPTYKFFEQMQN 760 770 >>gi|30172731|sp|Q60495.2|A4_CAVPO RecName: Full=Amyloid (770 aa) initn: 5026 init1: 5026 opt: 5026 Z-score: 5093.3 bits: 953.3 E(): 0 Smith-Waterman score: 5026; 96.883% identity (99.221% similar) in 770 aa overlap (40-809:1-770) 10 20 30 40 50 60 fk1322 ETAAVAARAEQGRGGSHSHSSALGAPRRVAMLPGLALLLLAAWTARALEVPTDGNAGLLA :::.::::::..:::::::::::::::::: gi|301 MLPSLALLLLTTWTARALEVPTDGNAGLLA 10 20 30 70 80 90 100 110 120 fk1322 EPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQ :::::::::.::::::::::::. ::::::::: .::::::::::::::::::::::::: gi|301 EPQIAMFCGKLNMHMNVQNGKWEPDPSGTKTCIGSKEGILQYCQEVYPELQITNVVEANQ 40 50 60 70 80 90 130 140 150 160 170 180 fk1322 PVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW ::::::::::.::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 PVTIQNWCKRSRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW 100 110 120 130 140 150 190 200 210 220 230 240 fk1322 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWW :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|301 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNIDSADAEEDDSDVWW 160 170 180 190 200 210 250 260 270 280 290 300 fk1322 GGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTT :::::::::::::::::::::::::.::::::::::: :::::::::::::::::::.:: gi|301 GGADTDYADGSEDKVVEVAEEEEVADVEEEEADDDEDVEDGDEVEEEAEEPYEEATEKTT 220 230 240 250 260 270 310 320 330 340 350 360 fk1322 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: gi|301 SIATTTTTTTESVEEVVREVCSEQAETGPCRSMISRWYFDVTEGKCAPFFYGGCGGNRNN 280 290 300 310 320 330 370 380 390 400 410 420 fk1322 FDTEEYCMAVCGSAMSQSLLKTTQEPLARDPVKLPTTAASTPDAVDKYLETPGDENEHAH :::::::::::::.:::.::::. ::... :::::::::::::::::::::::::::::: gi|301 FDTEEYCMAVCGSVMSQNLLKTSGEPVSQGPVKLPTTAASTPDAVDKYLETPGDENEHAH 340 350 360 370 380 390 430 440 450 460 470 480 fk1322 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER 400 410 420 430 440 450 490 500 510 520 530 540 fk1322 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK 460 470 480 490 500 510 550 560 570 580 590 600 fk1322 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ 520 530 540 550 560 570 610 620 630 640 650 660 fk1322 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVP :::::::::::::::::::::::::::::::::::::::::::::::::::: ::.:::: gi|301 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVP 580 590 600 610 620 630 670 680 690 700 710 720 fk1322 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF 640 650 660 670 680 690 730 740 750 760 770 780 fk1322 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|301 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS 700 710 720 730 740 750 790 800 fk1322 KMQQNGYENPTYKFFEQMQN :::::::::::::::::::: gi|301 KMQQNGYENPTYKFFEQMQN 760 770 >>gi|40950172|gb|AAR97726.1| beta amyloid precursor prot (770 aa) initn: 5015 init1: 5015 opt: 5015 Z-score: 5082.2 bits: 951.2 E(): 0 Smith-Waterman score: 5015; 96.753% identity (98.961% similar) in 770 aa overlap (40-809:1-770) 10 20 30 40 50 60 fk1322 ETAAVAARAEQGRGGSHSHSSALGAPRRVAMLPGLALLLLAAWTARALEVPTDGNAGLLA :::.:::.:::.:::::::::::::::::: gi|409 MLPALALVLLASWTARALEVPTDGNAGLLA 10 20 30 70 80 90 100 110 120 fk1322 EPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQ :::.::.::.: ::::::::::.::: :::::: .:: :::::::::::::::::::::: gi|409 EPQVAMLCGKLRMHMNVQNGKWESDPLGTKTCIGSKEDILQYCQEVYPELQITNVVEANQ 40 50 60 70 80 90 130 140 150 160 170 180 fk1322 PVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW :::::::::.:::::::: :.::::::::::::::::::::::::::::::::::::::: gi|409 PVTIQNWCKKGRKQCKTHAHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW 100 110 120 130 140 150 190 200 210 220 230 240 fk1322 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWW :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|409 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNIDSADAEEDDSDVWW 160 170 180 190 200 210 250 260 270 280 290 300 fk1322 GGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTT :::::::::::::::::::::::::.::::::.::::::::::::::::::::::::::: gi|409 GGADTDYADGSEDKVVEVAEEEEVADVEEEEAEDDEDDEDGDEVEEEAEEPYEEATERTT 220 230 240 250 260 270 310 320 330 340 350 360 fk1322 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|409 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN 280 290 300 310 320 330 370 380 390 400 410 420 fk1322 FDTEEYCMAVCGSAMSQSLLKTTQEPLARDPVKLPTTAASTPDAVDKYLETPGDENEHAH :::::::::::::.::::::::::::: .: ::::::::::::::::::::::::::::: gi|409 FDTEEYCMAVCGSVMSQSLLKTTQEPLPQDAVKLPTTAASTPDAVDKYLETPGDENEHAH 340 350 360 370 380 390 430 440 450 460 470 480 fk1322 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|409 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER 400 410 420 430 440 450 490 500 510 520 530 540 fk1322 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|409 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK 460 470 480 490 500 510 550 560 570 580 590 600 fk1322 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|409 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ 520 530 540 550 560 570 610 620 630 640 650 660 fk1322 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVP :::::.:::::::::::::::::::::::::::::::::::::::::::::: ::.:::: gi|409 NYSDDILANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVP 580 590 600 610 620 630 670 680 690 700 710 720 fk1322 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|409 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF 640 650 660 670 680 690 730 740 750 760 770 780 fk1322 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|409 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS 700 710 720 730 740 750 790 800 fk1322 KMQQNGYENPTYKFFEQMQN :::::::::::::::::::: gi|409 KMQQNGYENPTYKFFEQMQN 760 770 >>gi|112930|sp|P08592.2|A4_RAT RecName: Full=Amyloid bet (770 aa) initn: 5000 init1: 5000 opt: 5000 Z-score: 5067.0 bits: 948.4 E(): 0 Smith-Waterman score: 5000; 96.883% identity (99.091% similar) in 770 aa overlap (40-809:1-770) 10 20 30 40 50 60 fk1322 ETAAVAARAEQGRGGSHSHSSALGAPRRVAMLPGLALLLLAAWTARALEVPTDGNAGLLA :::.::::::::::.::::::::::::::: gi|112 MLPSLALLLLAAWTVRALEVPTDGNAGLLA 10 20 30 70 80 90 100 110 120 fk1322 EPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQ :::::::::.::::::::::::.:::::::::: :::::::::::::::::::::::::: gi|112 EPQIAMFCGKLNMHMNVQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQ 40 50 60 70 80 90 130 140 150 160 170 180 fk1322 PVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW :::::::::::::::::: :.::::::::::::::::::::::::::::::::::::::: gi|112 PVTIQNWCKRGRKQCKTHTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW 100 110 120 130 140 150 190 200 210 220 230 240 fk1322 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWW ::::::::::::::::::::::::::::::::::::::::::::..:::::::::::::: gi|112 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDSIDSADAEEDDSDVWW 160 170 180 190 200 210 250 260 270 280 290 300 fk1322 GGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTT ::::::::::.::::::::::::::.::::::.:::: :::::::::::::::::::::: gi|112 GGADTDYADGGEDKVVEVAEEEEVADVEEEEAEDDEDVEDGDEVEEEAEEPYEEATERTT 220 230 240 250 260 270 310 320 330 340 350 360 fk1322 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN 280 290 300 310 320 330 370 380 390 400 410 420 fk1322 FDTEEYCMAVCGSAMSQSLLKTTQEPLARDPVKLPTTAASTPDAVDKYLETPGDENEHAH :::::::::::::. ::::::::.::: .::::::::::::::::::::::::::::::: gi|112 FDTEEYCMAVCGSVSSQSLLKTTSEPLPQDPVKLPTTAASTPDAVDKYLETPGDENEHAH 340 350 360 370 380 390 430 440 450 460 470 480 fk1322 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER 400 410 420 430 440 450 490 500 510 520 530 540 fk1322 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|112 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPHHVFNMLKKYVRAEQKDRQHTLK 460 470 480 490 500 510 550 560 570 580 590 600 fk1322 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ 520 530 540 550 560 570 610 620 630 640 650 660 fk1322 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVP :::::::::::::::::::::::::::::::::::::::::::::::::::: ::.:::: gi|112 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVP 580 590 600 610 620 630 670 680 690 700 710 720 fk1322 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF ::::::::::::::::::::::::::::::::::::::::::::: ::::.::.:::::: gi|112 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFGHDSGFEVRHQKLVF 640 650 660 670 680 690 730 740 750 760 770 780 fk1322 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|112 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS 700 710 720 730 740 750 790 800 fk1322 KMQQNGYENPTYKFFEQMQN :::::::::::::::::::: gi|112 KMQQNGYENPTYKFFEQMQN 760 770 >>gi|62363233|gb|AAX81908.1| beta-amyloid precursor prot (770 aa) initn: 4998 init1: 4998 opt: 4998 Z-score: 5064.9 bits: 948.0 E(): 0 Smith-Waterman score: 4998; 96.753% identity (98.831% similar) in 770 aa overlap (40-809:1-770) 10 20 30 40 50 60 fk1322 ETAAVAARAEQGRGGSHSHSSALGAPRRVAMLPGLALLLLAAWTARALEVPTDGNAGLLA :::.:::.:::.:::::::::::::::::: gi|623 MLPALALVLLASWTARALEVPTDGNAGLLA 10 20 30 70 80 90 100 110 120 fk1322 EPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQ :::.::.::.: ::::::::::.::: :::::: .:: :::::::::::::::::::::: gi|623 EPQVAMLCGKLRMHMNVQNGKWESDPLGTKTCIGSKEDILQYCQEVYPELQITNVVEANQ 40 50 60 70 80 90 130 140 150 160 170 180 fk1322 PVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW :::::::::.:::::::: :.::::::::::::::::::::::::::::::::::::::: gi|623 PVTIQNWCKKGRKQCKTHAHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW 100 110 120 130 140 150 190 200 210 220 230 240 fk1322 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWW ::::::::::::::::::::::::::::::::::: :::::::::.:::::::::::::: gi|623 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVWCPLAEESDNIDSADAEEDDSDVWW 160 170 180 190 200 210 250 260 270 280 290 300 fk1322 GGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTT :::::::::::::::::::::::::.::::::.::::::::::::::::::::::::::: gi|623 GGADTDYADGSEDKVVEVAEEEEVADVEEEEAEDDEDDEDGDEVEEEAEEPYEEATERTT 220 230 240 250 260 270 310 320 330 340 350 360 fk1322 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|623 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN 280 290 300 310 320 330 370 380 390 400 410 420 fk1322 FDTEEYCMAVCGSAMSQSLLKTTQEPLARDPVKLPTTAASTPDAVDKYLETPGDENEHAH :::::::::::::.::::::::::::: .: ::::::::::::::::::::::::::::: gi|623 FDTEEYCMAVCGSVMSQSLLKTTQEPLPQDAVKLPTTAASTPDAVDKYLETPGDENEHAH 340 350 360 370 380 390 430 440 450 460 470 480 fk1322 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|623 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER 400 410 420 430 440 450 490 500 510 520 530 540 fk1322 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|623 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK 460 470 480 490 500 510 550 560 570 580 590 600 fk1322 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|623 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ 520 530 540 550 560 570 610 620 630 640 650 660 fk1322 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVP :::::::::::::::::::::::::::::::::::::::::::::::::::: ::.:::: gi|623 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVP 580 590 600 610 620 630 670 680 690 700 710 720 fk1322 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|623 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF 640 650 660 670 680 690 730 740 750 760 770 780 fk1322 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|623 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS 700 710 720 730 740 750 790 800 fk1322 KMQQNGYENPTYKFFEQMQN :::::::::::::::::::: gi|623 KMQQNGYENPTYKFFEQMQN 760 770 >>gi|30385620|gb|AAP23169.1| amyloid-beta precursor prot (770 aa) initn: 4989 init1: 4989 opt: 4989 Z-score: 5055.8 bits: 946.3 E(): 0 Smith-Waterman score: 4989; 96.753% identity (98.831% similar) in 770 aa overlap (40-809:1-770) 10 20 30 40 50 60 fk1322 ETAAVAARAEQGRGGSHSHSSALGAPRRVAMLPGLALLLLAAWTARALEVPTDGNAGLLA :::.::::::::::.::::::::::::::: gi|303 MLPSLALLLLAAWTVRALEVPTDGNAGLLA 10 20 30 70 80 90 100 110 120 fk1322 EPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQ :::::::::.::::::::::::.:::::::::: :::::::::::::::::::::::::: gi|303 EPQIAMFCGKLNMHMNVQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQ 40 50 60 70 80 90 130 140 150 160 170 180 fk1322 PVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW :::::::::::::::::: :.::::::::::::::::::::::::::::::::::::::: gi|303 PVTIQNWCKRGRKQCKTHTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW 100 110 120 130 140 150 190 200 210 220 230 240 fk1322 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWW ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|303 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDSVDSADAEEDDSDVWW 160 170 180 190 200 210 250 260 270 280 290 300 fk1322 GGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTT :::::::::::::::::::::::::.::::::::::: :::::::::::::::::::::: gi|303 GGADTDYADGSEDKVVEVAEEEEVADVEEEEADDDEDVEDGDEVEEEAEEPYEEATERTT 220 230 240 250 260 270 310 320 330 340 350 360 fk1322 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN : ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|303 STATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCVPFFYGGCGGNRNN 280 290 300 310 320 330 370 380 390 400 410 420 fk1322 FDTEEYCMAVCGSAMSQSLLKTTQEPLARDPVKLPTTAASTPDAVDKYLETPGDENEHAH :::::::::::::. .:::::::.::: .:: :::::::::::::::::::::::::::: gi|303 FDTEEYCMAVCGSVSTQSLLKTTSEPLPQDPDKLPTTAASTPDAVDKYLETPGDENEHAH 340 350 360 370 380 390 430 440 450 460 470 480 fk1322 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER 400 410 420 430 440 450 490 500 510 520 530 540 fk1322 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|303 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPHHVFNMLKKYVRAEQKDRQHTLK 460 470 480 490 500 510 550 560 570 580 590 600 fk1322 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ 520 530 540 550 560 570 610 620 630 640 650 660 fk1322 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVP :::::::::::::::::::::::::::::::::::::::::::::::::::: ::.:::: gi|303 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVP 580 590 600 610 620 630 670 680 690 700 710 720 fk1322 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF ::::::::::::::::::::::::::::::::::::::::::::: ::::.::.:::::: gi|303 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFGHDSGFEVRHQKLVF 640 650 660 670 680 690 730 740 750 760 770 780 fk1322 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|303 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS 700 710 720 730 740 750 790 800 fk1322 KMQQNGYENPTYKFFEQMQN :::::::::::::::::::: gi|303 KMQQNGYENPTYKFFEQMQN 760 770 >>gi|30581015|sp|P12023.3|A4_MOUSE RecName: Full=Amyloid (770 aa) initn: 4984 init1: 4984 opt: 4984 Z-score: 5050.7 bits: 945.4 E(): 0 Smith-Waterman score: 4984; 96.623% identity (98.831% similar) in 770 aa overlap (40-809:1-770) 10 20 30 40 50 60 fk1322 ETAAVAARAEQGRGGSHSHSSALGAPRRVAMLPGLALLLLAAWTARALEVPTDGNAGLLA :::.::::::::::.::::::::::::::: gi|305 MLPSLALLLLAAWTVRALEVPTDGNAGLLA 10 20 30 70 80 90 100 110 120 fk1322 EPQIAMFCGRLNMHMNVQNGKWDSDPSGTKTCIDTKEGILQYCQEVYPELQITNVVEANQ :::::::::.::::::::::::.:::::::::: :::::::::::::::::::::::::: gi|305 EPQIAMFCGKLNMHMNVQNGKWESDPSGTKTCIGTKEGILQYCQEVYPELQITNVVEANQ 40 50 60 70 80 90 130 140 150 160 170 180 fk1322 PVTIQNWCKRGRKQCKTHPHFVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW :::::::::::::::::: :.::::::::::::::::::::::::::::::::::::::: gi|305 PVTIQNWCKRGRKQCKTHTHIVIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHW 100 110 120 130 140 150 190 200 210 220 230 240 fk1322 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDNVDSADAEEDDSDVWW ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|305 HTVAKETCSEKSTNLHDYGMLLPCGIDKFRGVEFVCCPLAEESDSVDSADAEEDDSDVWW 160 170 180 190 200 210 250 260 270 280 290 300 fk1322 GGADTDYADGSEDKVVEVAEEEEVAEVEEEEADDDEDDEDGDEVEEEAEEPYEEATERTT ::::::::::.::::::::::::::.::::::::::: :::::::::::::::::::::: gi|305 GGADTDYADGGEDKVVEVAEEEEVADVEEEEADDDEDVEDGDEVEEEAEEPYEEATERTT 220 230 240 250 260 270 310 320 330 340 350 360 fk1322 SIATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCAPFFYGGCGGNRNN : ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::: gi|305 STATTTTTTTESVEEVVREVCSEQAETGPCRAMISRWYFDVTEGKCVPFFYGGCGGNRNN 280 290 300 310 320 330 370 380 390 400 410 420 fk1322 FDTEEYCMAVCGSAMSQSLLKTTQEPLARDPVKLPTTAASTPDAVDKYLETPGDENEHAH :::::::::::::. .:::::::.::: .:: :::::::::::::::::::::::::::: gi|305 FDTEEYCMAVCGSVSTQSLLKTTSEPLPQDPDKLPTTAASTPDAVDKYLETPGDENEHAH 340 350 360 370 380 390 430 440 450 460 470 480 fk1322 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 FQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKVESLEQEAANER 400 410 420 430 440 450 490 500 510 520 530 540 fk1322 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLK :::::::::::::::::::::::::::::::::::::.:::::::::::::::::::::: gi|305 QQLVETHMARVEAMLNDRRRLALENYITALQAVPPRPHHVFNMLKKYVRAEQKDRQHTLK 460 470 480 490 500 510 550 560 570 580 590 600 fk1322 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 HFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQDEVDELLQKEQ 520 530 540 550 560 570 610 620 630 640 650 660 fk1322 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHSFGADSVP :::::::::::::::::::::::::::::::::::::::::::::::::::: ::.:::: gi|305 NYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQPWHPFGVDSVP 580 590 600 610 620 630 670 680 690 700 710 720 fk1322 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFRHDSGYEVHHQKLVF ::::::::::::::::::::::::::::::::::::::::::::: ::::.::.:::::: gi|305 ANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDAEFGHDSGFEVRHQKLVF 640 650 660 670 680 690 730 740 750 760 770 780 fk1322 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|305 FAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVDAAVTPEERHLS 700 710 720 730 740 750 790 800 fk1322 KMQQNGYENPTYKFFEQMQN :::::::::::::::::::: gi|305 KMQQNGYENPTYKFFEQMQN 760 770 809 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Thu Jun 18 13:21:24 2009 done: Thu Jun 18 13:23:57 2009 Total Scan time: 1311.520 Total Display time: 0.390 Function used was FASTA [version 34.26.5 April 26, 2007]