hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-13235842/chunk_1/iprscan-20090618-13235842.nocrc
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Query sequence: fk13225
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00006                                                 447.3   7.9e-130   1
SM00131                                                  99.9      3e-25   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00006      1/1      63   227 ..     1   180 []   447.3 7.9e-130
SM00131      1/1     328   381 ..     1    56 []    99.9    3e-25

Alignments of top-scoring domains:
SM00006: domain 1 of 1, from 63 to 227: score 447.3, E = 7.9e-130
                   *->gaaeakaePQiAmlCGrlnlhmnlqtseeGrWetDpsrtktGPtCLr
                      g+a+++aePQiAm+CGrln+hmn+q+   G+W++Dps+tkt   C++
     fk13225    63    GNAGLLAEPQIAMFCGRLNMHMNVQN---GKWDSDPSGTKT---CID 103  

                   dKedvLqYCrkaYPelqITNvvEasqpvkIedWCrrgrsnAAqCkghhhs
                   +Ke++LqYC+++YPelqITNvvEa+qpv+I++WC+rgr+   qCk+h+h+
     fk13225   104 TKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKRGRK---QCKTHPHF 150  

                   ViPFrCLvGEFvSdALLVPegCqFlHqermdqCedhqrWhqeakeaCsek
                   ViP+rCLvGEFvSdALLVP++C+FlHqermd+Ce+h++Wh++ake+Csek
     fk13225   151 VIPYRCLVGEFVSDALLVPDKCKFLHQERMDVCETHLHWHTVAKETCSEK 200  

                   kskGnkgmilrsfgMLLPCGiDkFrGVEFVCCP<-*
                         +++l+++gMLLPCGiDkFrGVEFVCCP   
     fk13225   201 ------STNLHDYGMLLPCGIDKFRGVEFVCCP    227  

SM00131: domain 1 of 1, from 328 to 381: score 99.9, E = 3e-25
                   *->dvCslpgpdtGptCg.sipRyyYdpetgkCepFtYgGaCgGNaNNFe
                      +vCs+  ++tGp C+  i+R+y+d + gkC pF+YgG CgGN+NNF+
     fk13225   328    EVCSEQ-AETGP-CRaMISRWYFDVTEGKCAPFFYGG-CGGNRNNFD 371  

                   tkeeCertCg<-*
                   t+e C+  Cg   
     fk13225   372 TEEYCMAVCG    381  

//