# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ofk13476.fasta.nr -Q fk13476.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 fk13476, 233 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6833058 sequences Expectation_n fit: rho(ln(x))= 5.7206+/-0.000191; mu= 6.6185+/- 0.011 mean_var=94.9592+/-18.216, 0's: 23 Z-trim: 67 B-trim: 57 in 1/66 Lambda= 0.131615 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62088696|dbj|BAD92795.1| splicing factor, argin ( 233) 1636 320.0 1.7e-85 gi|114669600|ref|XP_523806.2| PREDICTED: similar t ( 420) 1512 296.7 3.3e-78 gi|109114623|ref|XP_001103473.1| PREDICTED: simila ( 406) 1502 294.8 1.2e-77 gi|45708738|gb|AAH33785.1| SFRS1 protein [Homo sap ( 201) 1431 281.0 8e-74 gi|26347437|dbj|BAC37367.1| unnamed protein produc ( 201) 1398 274.8 6.1e-72 gi|148669917|gb|EDL01864.1| splicing factor, argin ( 193) 1316 259.2 2.9e-67 gi|730773|sp|Q07955|SFRS1_HUMAN Splicing factor, a ( 248) 1307 257.6 1.1e-66 gi|68724975|sp|Q5R7H2.3|SFRS1_PONAB Splicing facto ( 248) 1307 257.6 1.1e-66 gi|60811245|gb|AAX36166.1| splicing factor arginin ( 249) 1307 257.6 1.1e-66 gi|119614898|gb|EAW94492.1| splicing factor, argin ( 253) 1307 257.6 1.2e-66 gi|179074|gb|AAA35564.1| alternative gi|119614 ( 292) 1303 256.9 2.2e-66 gi|73966554|ref|XP_853057.1| PREDICTED: similar to ( 292) 1303 256.9 2.2e-66 gi|158260889|dbj|BAF82622.1| unnamed protein produ ( 248) 1296 255.5 4.9e-66 gi|166091440|ref|NP_001107213.1| splicing factor, ( 248) 1293 254.9 7.2e-66 gi|82233969|sp|Q5ZML3|SFRS1_CHICK Splicing factor, ( 257) 1293 254.9 7.4e-66 gi|26383576|dbj|BAC25546.1| unnamed protein produc ( 248) 1279 252.3 4.6e-65 gi|34785174|gb|AAH56752.1| Sfrs1 protein [Danio re ( 188) 1263 249.1 3e-64 gi|71162369|sp|Q6NYA0|SFRS1_BRARE Splicing factor, ( 245) 1253 247.3 1.4e-63 gi|63101956|gb|AAH95586.1| Sfrs1 protein [Danio re ( 258) 1242 245.3 6.1e-63 gi|47227796|emb|CAG08959.1| unnamed protein produc ( 245) 1172 231.9 5.9e-59 gi|119614893|gb|EAW94487.1| splicing factor, argin ( 230) 989 197.2 1.6e-48 gi|119614896|gb|EAW94490.1| splicing factor, argin ( 142) 984 196.0 2.2e-48 gi|156545752|ref|XP_001605411.1| PREDICTED: simila ( 257) 967 193.0 3.2e-47 gi|193687020|ref|XP_001947357.1| PREDICTED: simila ( 231) 955 190.7 1.4e-46 gi|73966550|ref|XP_866798.1| PREDICTED: similar to ( 195) 943 188.4 6.1e-46 gi|91085405|ref|XP_967263.1| PREDICTED: similar to ( 226) 938 187.5 1.3e-45 gi|54261635|gb|AAH84289.1| LOC495254 protein [Xeno ( 230) 936 187.1 1.7e-45 gi|108877724|gb|EAT41949.1| arginine/serine-rich s ( 237) 917 183.5 2.2e-44 gi|194168848|gb|EDW83749.1| GK13511 [Drosophila wi ( 263) 905 181.3 1.1e-43 gi|159155810|gb|AAI54584.1| Zgc:77449 protein [Dan ( 246) 892 178.8 6e-43 gi|157016810|gb|EAA09889.4| AGAP010496-PA [Anophel ( 258) 892 178.8 6.2e-43 gi|45501375|gb|AAH67134.1| Zgc:77449 [Danio rerio] ( 244) 887 177.8 1.1e-42 gi|54639204|gb|EAL28606.1| GA20008-PA [Drosophila ( 258) 886 177.7 1.4e-42 gi|194112372|gb|EDW34415.1| GL22249 [Drosophila pe ( 263) 886 177.7 1.4e-42 gi|193916264|gb|EDW15131.1| GI24651 [Drosophila mo ( 246) 883 177.1 2e-42 gi|194151230|gb|EDW66664.1| GJ23504 [Drosophila vi ( 247) 883 177.1 2e-42 gi|193894964|gb|EDV93830.1| GH18077 [Drosophila gr ( 252) 883 177.1 2e-42 gi|194183721|gb|EDW97332.1| GE26323 [Drosophila ya ( 254) 883 177.1 2e-42 gi|7243684|gb|AAF43413.1|AF232773_1 SR family spli ( 255) 883 177.1 2e-42 gi|190627913|gb|EDV43437.1| GF16525 [Drosophila an ( 253) 867 174.0 1.6e-41 gi|3929377|sp|Q13242|SFRS9_HUMAN Splicing factor, ( 221) 865 173.6 1.9e-41 gi|49257722|gb|AAH74531.1| Splicing factor, argini ( 225) 865 173.6 2e-41 gi|194043069|ref|XP_001928307.1| PREDICTED: simila ( 221) 864 173.4 2.2e-41 gi|66774167|sp|Q9D0B0|SFRS9_MOUSE Splicing factor, ( 222) 864 173.4 2.2e-41 gi|74192738|dbj|BAE34886.1| unnamed protein produc ( 222) 861 172.9 3.3e-41 gi|158254720|dbj|BAF83333.1| unnamed protein produ ( 221) 860 172.7 3.7e-41 gi|148669916|gb|EDL01863.1| splicing factor, argin ( 168) 858 172.2 3.9e-41 gi|57105666|ref|XP_534706.1| PREDICTED: similar to ( 221) 856 171.9 6.3e-41 gi|92058728|sp|Q5PPI1|SFRS9_RAT Splicing factor, a ( 221) 855 171.7 7.2e-41 gi|119888564|ref|XP_001252872.1| PREDICTED: simila ( 221) 854 171.5 8.2e-41 >>gi|62088696|dbj|BAD92795.1| splicing factor, arginine/ (233 aa) initn: 1636 init1: 1636 opt: 1636 Z-score: 1690.1 bits: 320.0 E(): 1.7e-85 Smith-Waterman score: 1636; 100.000% identity (100.000% similar) in 233 aa overlap (1-233:1-233) 10 20 30 40 50 60 fk1347 GRGRRGAAAGSLCRALGLVGRPVLESALFVTAMSGGGVIRGPAGNNDCRIYVGNLPPDIR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GRGRRGAAAGSLCRALGLVGRPVLESALFVTAMSGGGVIRGPAGNNDCRIYVGNLPPDIR 10 20 30 40 50 60 70 80 90 100 110 120 fk1347 TKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEF 70 80 90 100 110 120 130 140 150 160 170 180 fk1347 PRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVC 130 140 150 160 170 180 190 200 210 220 230 fk1347 YADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEVGYTRILFFDQNWIQWS ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 YADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEVGYTRILFFDQNWIQWS 190 200 210 220 230 >>gi|114669600|ref|XP_523806.2| PREDICTED: similar to sp (420 aa) initn: 1508 init1: 1508 opt: 1512 Z-score: 1559.4 bits: 296.7 E(): 3.3e-78 Smith-Waterman score: 1512; 97.321% identity (98.661% similar) in 224 aa overlap (1-222:136-359) 10 20 30 fk1347 GRGRRGAAAGSLCRALGLVGRPVLESALFV :::::::::::::::::::::::::::::: gi|114 WDRIAVSFRFSSSVSPPYPCAELIKAPFWRGRGRRGAAAGSLCRALGLVGRPVLESALFV 110 120 130 140 150 160 40 50 60 70 80 90 fk1347 TAMSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 TAMSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAF 170 180 190 200 210 220 100 110 120 130 140 150 fk1347 VEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 VEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRR 230 240 250 260 270 280 160 170 180 190 200 210 fk1347 SENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNT 290 300 310 320 330 340 220 230 fk1347 KFRSHE--VGYTRILFFDQNWIQWS :::::: ..: :. gi|114 KFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYS 350 360 370 380 390 400 >>gi|109114623|ref|XP_001103473.1| PREDICTED: similar to (406 aa) initn: 1498 init1: 1498 opt: 1502 Z-score: 1549.3 bits: 294.8 E(): 1.2e-77 Smith-Waterman score: 1502; 96.875% identity (98.214% similar) in 224 aa overlap (1-222:122-345) 10 20 30 fk1347 GRGRRGAAAGSLCRALGLVGRPVLESALFV ::::::::::::: :::::::::::::::: gi|109 WDRIAVSFRFSSSVSPPYPCAELIKAPFWRGRGRRGAAAGSLCGALGLVGRPVLESALFV 100 110 120 130 140 150 40 50 60 70 80 90 fk1347 TAMSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TAMSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAF 160 170 180 190 200 210 100 110 120 130 140 150 fk1347 VEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 VEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRR 220 230 240 250 260 270 160 170 180 190 200 210 fk1347 SENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SENRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNT 280 290 300 310 320 330 220 230 fk1347 KFRSHE--VGYTRILFFDQNWIQWS :::::: ..: :. gi|109 KFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYS 340 350 360 370 380 390 >>gi|45708738|gb|AAH33785.1| SFRS1 protein [Homo sapiens (201 aa) initn: 1431 init1: 1431 opt: 1431 Z-score: 1480.6 bits: 281.0 E(): 8e-74 Smith-Waterman score: 1431; 100.000% identity (100.000% similar) in 201 aa overlap (33-233:1-201) 10 20 30 40 50 60 fk1347 GRRGAAAGSLCRALGLVGRPVLESALFVTAMSGGGVIRGPAGNNDCRIYVGNLPPDIRTK :::::::::::::::::::::::::::::: gi|457 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTK 10 20 30 70 80 90 100 110 120 fk1347 DIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|457 DIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR 40 50 60 70 80 90 130 140 150 160 170 180 fk1347 SGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|457 SGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYA 100 110 120 130 140 150 190 200 210 220 230 fk1347 DVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEVGYTRILFFDQNWIQWS ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|457 DVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEVGYTRILFFDQNWIQWS 160 170 180 190 200 >>gi|26347437|dbj|BAC37367.1| unnamed protein product [M (201 aa) initn: 1463 init1: 1398 opt: 1398 Z-score: 1446.7 bits: 274.8 E(): 6.1e-72 Smith-Waterman score: 1398; 98.507% identity (99.005% similar) in 201 aa overlap (33-233:1-201) 10 20 30 40 50 60 fk1347 GRRGAAAGSLCRALGLVGRPVLESALFVTAMSGGGVIRGPAGNNDCRIYVGNLPPDIRTK :::::::::::::::::::::::::::::: gi|263 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTK 10 20 30 70 80 90 100 110 120 fk1347 DIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 DIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR 40 50 60 70 80 90 130 140 150 160 170 180 fk1347 SGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|263 SGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYA 100 110 120 130 140 150 190 200 210 220 230 fk1347 DVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEVGYTRILFFDQNWIQWS :::::::::::::::::::::::::::::::::::::: :::: :::::.: gi|263 DVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEVGYTLILFFGQNWIQFS 160 170 180 190 200 >>gi|148669917|gb|EDL01864.1| splicing factor, arginine/ (193 aa) initn: 1316 init1: 1316 opt: 1316 Z-score: 1362.8 bits: 259.2 E(): 2.9e-67 Smith-Waterman score: 1316; 100.000% identity (100.000% similar) in 186 aa overlap (33-218:1-186) 10 20 30 40 50 60 fk1347 GRRGAAAGSLCRALGLVGRPVLESALFVTAMSGGGVIRGPAGNNDCRIYVGNLPPDIRTK :::::::::::::::::::::::::::::: gi|148 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTK 10 20 30 70 80 90 100 110 120 fk1347 DIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 DIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR 40 50 60 70 80 90 130 140 150 160 170 180 fk1347 SGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYA 100 110 120 130 140 150 190 200 210 220 230 fk1347 DVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEVGYTRILFFDQNWIQWS :::::::::::::::::::::::::::::::::::: gi|148 DVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEVGRNCLHPG 160 170 180 190 >>gi|730773|sp|Q07955|SFRS1_HUMAN Splicing factor, argin (248 aa) initn: 1303 init1: 1303 opt: 1307 Z-score: 1352.1 bits: 257.6 E(): 1.1e-66 Smith-Waterman score: 1307; 96.875% identity (98.438% similar) in 192 aa overlap (33-222:1-192) 10 20 30 40 50 60 fk1347 GRRGAAAGSLCRALGLVGRPVLESALFVTAMSGGGVIRGPAGNNDCRIYVGNLPPDIRTK :::::::::::::::::::::::::::::: gi|730 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTK 10 20 30 70 80 90 100 110 120 fk1347 DIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|730 DIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR 40 50 60 70 80 90 130 140 150 160 170 180 fk1347 SGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|730 SGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYA 100 110 120 130 140 150 190 200 210 220 230 fk1347 DVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE--VGYTRILFFDQNWIQWS :::::::::::::::::::::::::::::::::: ..: :. gi|730 DVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSR 160 170 180 190 200 210 gi|730 SRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSRSRT 220 230 240 >>gi|68724975|sp|Q5R7H2.3|SFRS1_PONAB Splicing factor, a (248 aa) initn: 1303 init1: 1303 opt: 1307 Z-score: 1352.1 bits: 257.6 E(): 1.1e-66 Smith-Waterman score: 1307; 96.875% identity (98.438% similar) in 192 aa overlap (33-222:1-192) 10 20 30 40 50 60 fk1347 GRRGAAAGSLCRALGLVGRPVLESALFVTAMSGGGVIRGPAGNNDCRIYVGNLPPDIRTK :::::::::::::::::::::::::::::: gi|687 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTK 10 20 30 70 80 90 100 110 120 fk1347 DIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|687 DIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR 40 50 60 70 80 90 130 140 150 160 170 180 fk1347 SGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|687 SGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYA 100 110 120 130 140 150 190 200 210 220 230 fk1347 DVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE--VGYTRILFFDQNWIQWS :::::::::::::::::::::::::::::::::: ..: :. gi|687 DVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSR 160 170 180 190 200 210 gi|687 SRSRNRSRSNSRSRSYSPRRSRGSPRYSPRHSRSRSRT 220 230 240 >>gi|60811245|gb|AAX36166.1| splicing factor arginine/se (249 aa) initn: 1303 init1: 1303 opt: 1307 Z-score: 1352.1 bits: 257.6 E(): 1.1e-66 Smith-Waterman score: 1307; 96.875% identity (98.438% similar) in 192 aa overlap (33-222:1-192) 10 20 30 40 50 60 fk1347 GRRGAAAGSLCRALGLVGRPVLESALFVTAMSGGGVIRGPAGNNDCRIYVGNLPPDIRTK :::::::::::::::::::::::::::::: gi|608 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTK 10 20 30 70 80 90 100 110 120 fk1347 DIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 DIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR 40 50 60 70 80 90 130 140 150 160 170 180 fk1347 SGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 SGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYA 100 110 120 130 140 150 190 200 210 220 230 fk1347 DVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE--VGYTRILFFDQNWIQWS :::::::::::::::::::::::::::::::::: ..: :. gi|608 DVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSR 160 170 180 190 200 210 gi|608 SRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSRSRTL 220 230 240 >>gi|119614898|gb|EAW94492.1| splicing factor, arginine/ (253 aa) initn: 1303 init1: 1303 opt: 1307 Z-score: 1352.0 bits: 257.6 E(): 1.2e-66 Smith-Waterman score: 1307; 96.875% identity (98.438% similar) in 192 aa overlap (33-222:1-192) 10 20 30 40 50 60 fk1347 GRRGAAAGSLCRALGLVGRPVLESALFVTAMSGGGVIRGPAGNNDCRIYVGNLPPDIRTK :::::::::::::::::::::::::::::: gi|119 MSGGGVIRGPAGNNDCRIYVGNLPPDIRTK 10 20 30 70 80 90 100 110 120 fk1347 DIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DIEDVFYKYGAIRDIDLKNRRGGPPFAFVEFEDPRDAEDAVYGRDGYDYDGYRLRVEFPR 40 50 60 70 80 90 130 140 150 160 170 180 fk1347 SGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SGRGTGRGGGGGGGGGAPRGRYGPPSRRSENRVVVSGLPPSGSWQDLKDHMREAGDVCYA 100 110 120 130 140 150 190 200 210 220 230 fk1347 DVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHE--VGYTRILFFDQNWIQWS :::::::::::::::::::::::::::::::::: ..: :. gi|119 DVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSR 160 170 180 190 200 210 gi|119 SRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSRSHISEEMD 220 230 240 250 233 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Mon Aug 11 13:12:17 2008 done: Mon Aug 11 13:15:02 2008 Total Scan time: 681.020 Total Display time: 0.030 Function used was FASTA [version 34.26.5 April 26, 2007]