hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-13262909/chunk_1/iprscan-20080811-13262909.nocrc
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Query sequence: fk13658
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00353                                                  51.4    1.2e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00353    1/1      70   122 ..     1    61 []    51.4  1.2e-10

Alignments of top-scoring domains:
SM00353: domain 1 of 1, from 70 to 122: score 51.4, E = 1.2e-10
                   *->narERrlrRRekiNeqafdeLrslvPtlpkgggnskKlsKasiLrlA
                      n++E+  +RR+k++  ++++L++lvP  p    +s++ + +s L++A
     fk13658    70    NELEK--HRRAKLRL-YLEQLKQLVPLGP----DSTRHTTLSLLKRA 109  

                   ieYIrksLqeqlqe<-*
                     +I k+L+eq +    
     fk13658   110 KVHI-KKLEEQDRR    122  

//