hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-13371038/chunk_1/iprscan-20080811-13371038.nocrc
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Query sequence: fk13737
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00486                                                 556.4   1.2e-162   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00486    1/1     310   767 ..     1   531 []   556.4 1.2e-162

Alignments of top-scoring domains:
SM00486: domain 1 of 1, from 310 to 767: score 556.4, E = 1.2e-162
                   *->pplkilsfDIETysdngkfGankggfPdaeikdpiiqislviydggk
                      +pl++lsfDIE+ ++       kg fP++e +dp+iqi++++ + g+
     fk13737   310    APLRVLSFDIECAGR-------KGIFPEPE-RDPVIQICSLGLRWGE 348  

                   kgawdkdnsyvshirvvdperrilftlgtckeiegvevyefdsErellla
                   +                +p+ r  +tl++c++i g  v +++ E +ll+a
     fk13737   349 P----------------EPFLRLALTLRPCAPILGAKVQSYEKEEDLLQA 382  

                   ffefikkydpdiiygyNisnFDlpyilnrlekllkiielsekdnrrllls
                   + +fi+  dpd+i+gyNi+nFDlpy+++r+++ lk+  +           
     fk13737   383 WSTFIRIMDPDVITGYNIQNFDLPYLISRAQT-LKVQTFP---------- 421  

                   kigrlkrslsiriprkkprfssksfgladptrktikvyipgrlviDlyrv
                   ++gr+        +++  +f+sk++g    +r+t+ v ++gr+++D+++v
     fk13737   422 FLGRVAGL---CSNIRDSSFQSKQTG----RRDTKVVSMVGRVQMDMLQV 464  

                   ykrklknklpsykLdteKcCPykavaeylL...kedlpykkywdipelyn
                   + r++k  l+sy+L++        v++++L+++ked+ ++    i++l+n
     fk13737   465 LLREYK--LRSYTLNA--------VSFHFLgeqKEDVQHS---IITDLQN 501  

                   g.yeerdrllrYciqDavltlklfnklnnsyeykevipliielarlagip
                   g++ +r+rl+ Yc++Da+l+l+l+++l+       v+++++e+ar+ g+p
     fk13737   502 GnDQTRRRLAVYCLKDAYLPLRLLERLM-------VLVNAVEMARVTGVP 544  

                   lrrvlyygsqirveslllreakkrnyilPskkl.kkekYeGadlVlePkk
                   l+++l++g+q +v s+llr+a +++ ++P  k++  e Y+Ga +V+eP+k
     fk13737   545 LSYLLSRGQQVKVVSQLLRQAMHEGLLMPVVKSeGGEDYTGA-TVIEPLK 593  

                   GfyenpvlvlDFaSLYPSiiiahNlcystlvle.................
                   G+y+ p+++lDF+SLYPSi++ahNlcy+tl+++++  + + +++   +++
     fk13737   594 GYYDVPIATLDFSSLYPSIMMAHNLCYTTLLRPgtaqklgltedqfirtp 643  

                   ....fvkknvrkgilpklLkklldkRkeiKklmkkekilsniriGneitk
                   ++++fvk +vrkg+lp++L++ll+ Rk+ K++++ke+             
     fk13737   644 tgdeFVKTSVRKGLLPQILENLLSARKRAKAELAKET------------- 680  

                   svdieesdpseesrklldsrQlalKltaNSvYGylgftnsrlpckplAfl
                          dp    r++ld+rQlalK++aNSvYG++g++ ++lpc++++  
     fk13737   681 -------DPLR--RQVLDGRQLALKVSANSVYGFTGAQVGKLPCLEIS-- 719  

                   asvTalGRemlektkelieengypseilssalawrafleekygfkviYGD
                    svT +GR+m+ektk l+e++++ +++ s             ++kv+YGD
     fk13737   720 QSVTGFGRQMIEKTKQLVESKYTVENGYST------------SAKVVYGD 757  

                   TDSifvtkpg<-*
                   TDS++++++    
     fk13737   758 TDSVMCRFGV    767  

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