hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-14153764/chunk_1/iprscan-20080811-14153764.nocrc
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Query sequence: fk13968
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00581                                                 124.9    8.9e-33   1
SM00513                                                  36.9    2.8e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00513    1/1      83   117 ..     1    35 []    36.9  2.8e-06
SM00581    1/1     660   718 ..     1    62 []   124.9  8.9e-33

Alignments of top-scoring domains:
SM00513: domain 1 of 1, from 83 to 117: score 36.9, E = 2.8e-06
                   *->lskLkVseLkdeLkkrGLstsGrKaeLvkRLleal<-*
                      + ++  +eL+++L ++G ++ G++ eLv+RL++++   
     fk13968    83    YGAWAAQELQAKLAEIGAPIQGNREELVERLQSYT    117  

SM00581: domain 1 of 1, from 660 to 718: score 124.9, E = 8.9e-33
                   *->vkhfkPGrISdeLReALGlpeg.nafkqlPpWlyrMrrlGlidGyPP
                      +k++kPG++SdeLR++LG+p g+na+k +PpWl++M+r+G    +PP
     fk13968   660    LKEKKPGDLSDELRISLGMPVGpNAHKVPPPWLIAMQRYG----PPP 702  

                   gYprlkIkglnapipl<-*
                   +Yp+lkI+gln+pip+   
     fk13968   703 SYPNLKIPGLNSPIPE    718  

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