# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oha00462.fasta.nr -Q ha00462.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ha00462, 378 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6838706 sequences Expectation_n fit: rho(ln(x))= 5.6869+/-0.000194; mu= 8.7721+/- 0.011 mean_var=97.6867+/-18.483, 0's: 35 Z-trim: 54 B-trim: 0 in 0/65 Lambda= 0.129765 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|231741|sp|P30279|CCND2_HUMAN G1/S-specific cycl ( 289) 1928 370.8 1.7e-100 gi|54696554|gb|AAV38649.1| cyclin D2 [synthetic co ( 290) 1928 370.8 1.7e-100 gi|62898886|dbj|BAD97297.1| cyclin D2 variant [Hom ( 289) 1927 370.7 2e-100 gi|61365653|gb|AAX42741.1| cyclin D2 [synthetic co ( 290) 1922 369.7 3.8e-100 gi|61355683|gb|AAX41165.1| cyclin D2 [synthetic co ( 289) 1920 369.3 4.9e-100 gi|73997778|ref|XP_854586.1| PREDICTED: similar to ( 289) 1813 349.3 5.3e-94 gi|122145325|sp|Q0P5D3|CCND2_BOVIN G1/S-specific c ( 289) 1808 348.4 1e-93 gi|75066003|sp|Q8WNW2|CCND2_PIG G1/S-specific cycl ( 288) 1801 347.1 2.5e-93 gi|149049359|gb|EDM01813.1| cyclin D2, isoform CRA ( 288) 1795 345.9 5.4e-93 gi|194211581|ref|XP_001494202.2| PREDICTED: simila ( 289) 1794 345.8 6.2e-93 gi|416789|sp|Q04827|CCND2_RAT G1/S-specific cyclin ( 288) 1790 345.0 1e-92 gi|231742|sp|P30280|CCND2_MOUSE G1/S-specific cycl ( 289) 1776 342.4 6.4e-92 gi|577335|dbj|BAA03815.1| cyclin D2 [Rattus norveg ( 288) 1772 341.6 1.1e-91 gi|126340068|ref|XP_001365985.1| PREDICTED: simila ( 290) 1655 319.7 4.2e-85 gi|1705784|sp|P49706|CCND2_CHICK G1/S-specific cyc ( 291) 1616 312.4 6.7e-83 gi|76779695|gb|AAI06704.1| MGC132398 protein [Xeno ( 291) 1597 308.9 7.9e-82 gi|1705785|sp|P53782|CCND2_XENLA G1/S-specific cyc ( 291) 1592 307.9 1.5e-81 gi|180010|gb|AAA51928.1| cyclin D2 ( 240) 1587 306.9 2.5e-81 gi|47221876|emb|CAF98888.1| unnamed protein produc ( 297) 1480 287.0 3.1e-75 gi|126631726|gb|AAI33932.1| Zgc:162280 protein [Da ( 298) 1443 280.1 3.8e-73 gi|94734122|emb|CAK04685.1| novel protein similar ( 295) 1334 259.6 5.3e-67 gi|149421960|ref|XP_001518484.1| PREDICTED: simila ( 276) 1236 241.3 1.7e-61 gi|53130850|emb|CAG31754.1| hypothetical protein [ ( 292) 1232 240.5 2.9e-61 gi|3023475|sp|Q90459|CCND1_BRARE G1/S-specific cyc ( 291) 1203 235.1 1.3e-59 gi|19880484|gb|AAM00355.1|AF365874_1 cyclin D1 [Da ( 291) 1202 234.9 1.4e-59 gi|27694633|gb|AAH43758.1| MGC52909 protein [Xenop ( 291) 1199 234.4 2.1e-59 gi|62510475|sp|Q5R6J5.1|CCND1_PONAB G1/S-specific ( 295) 1195 233.6 3.6e-59 gi|49257947|gb|AAH74566.1| Cyclin D1 (PRAD1: parat ( 291) 1193 233.2 4.6e-59 gi|61211763|sp|Q64HP0|CCND1_CANFA G1/S-specific cy ( 295) 1193 233.2 4.7e-59 gi|145558686|gb|ABP73256.1| cyclin D1 [Cricetulus ( 295) 1193 233.2 4.7e-59 gi|27371142|gb|AAH41525.1| Ccnd1-prov protein [Xen ( 291) 1191 232.9 6e-59 gi|109105128|ref|XP_001101029.1| PREDICTED: cyclin ( 295) 1191 232.9 6e-59 gi|116152|sp|P24385|CCND1_HUMAN G1/S-specific cycl ( 295) 1191 232.9 6e-59 gi|60831705|gb|AAX36980.1| cyclin D1 [synthetic co ( 296) 1191 232.9 6.1e-59 gi|61368367|gb|AAX43164.1| cyclin D1 [synthetic co ( 296) 1191 232.9 6.1e-59 gi|109820070|sp|Q2KI22|CCND1_BOVIN G1/S-specific c ( 295) 1190 232.7 6.9e-59 gi|1705781|sp|P55169|CCND1_CHICK G1/S-specific cyc ( 292) 1188 232.3 8.9e-59 gi|60819010|gb|AAX36485.1| cyclin D1 [synthetic co ( 295) 1186 231.9 1.2e-58 gi|60654161|gb|AAX29773.1| cyclin D1 [synthetic co ( 296) 1186 231.9 1.2e-58 gi|60830513|gb|AAX36932.1| cyclin D1 [synthetic co ( 296) 1186 231.9 1.2e-58 gi|74221114|dbj|BAE42061.1| unnamed protein produc ( 295) 1184 231.6 1.5e-58 gi|729113|sp|P39948|CCND1_RAT G1/S-specific cyclin ( 295) 1182 231.2 1.9e-58 gi|116153|sp|P25322|CCND1_MOUSE G1/S-specific cycl ( 295) 1182 231.2 1.9e-58 gi|1705782|sp|P50755|CCND1_XENLA G1/S-specific cyc ( 291) 1181 231.0 2.2e-58 gi|126309863|ref|XP_001370590.1| PREDICTED: simila ( 292) 1181 231.0 2.2e-58 gi|181245|gb|AAA52136.1| cyclin D ( 295) 1176 230.1 4.2e-58 gi|20981685|sp|P30281|CCND3_HUMAN G1/S-specific cy ( 292) 1174 229.7 5.4e-58 gi|60654231|gb|AAX29808.1| cyclin D3 [synthetic co ( 293) 1174 229.7 5.5e-58 gi|21397158|gb|AAM51826.1|AF517525_1 cyclin D3 [Ho ( 292) 1173 229.5 6.2e-58 gi|60822866|gb|AAX36623.1| cyclin D3 [synthetic co ( 292) 1173 229.5 6.2e-58 >>gi|231741|sp|P30279|CCND2_HUMAN G1/S-specific cyclin-D (289 aa) initn: 1928 init1: 1928 opt: 1928 Z-score: 1959.2 bits: 370.8 E(): 1.7e-100 Smith-Waterman score: 1928; 100.000% identity (100.000% similar) in 289 aa overlap (90-378:1-289) 60 70 80 90 100 110 ha0046 RSPLPFQKTKTEKPFSRPGKAGGRGAAGLAMELLCHEVDPVRRAVRDRNLLRDDRVLQNL :::::::::::::::::::::::::::::: gi|231 MELLCHEVDPVRRAVRDRNLLRDDRVLQNL 10 20 30 120 130 140 150 160 170 ha0046 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|231 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 40 50 60 70 80 90 180 190 200 210 220 230 ha0046 VPTPKSHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|231 VPTPKSHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN 100 110 120 130 140 150 240 250 260 270 280 290 ha0046 LAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|231 LAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA 160 170 180 190 200 210 300 310 320 330 340 350 ha0046 ICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDQRDGSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|231 ICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDQRDGSK 220 230 240 250 260 270 360 370 ha0046 SEDELDQASTPTDVRDIDL ::::::::::::::::::: gi|231 SEDELDQASTPTDVRDIDL 280 >>gi|54696554|gb|AAV38649.1| cyclin D2 [synthetic constr (290 aa) initn: 1928 init1: 1928 opt: 1928 Z-score: 1959.2 bits: 370.8 E(): 1.7e-100 Smith-Waterman score: 1928; 100.000% identity (100.000% similar) in 289 aa overlap (90-378:1-289) 60 70 80 90 100 110 ha0046 RSPLPFQKTKTEKPFSRPGKAGGRGAAGLAMELLCHEVDPVRRAVRDRNLLRDDRVLQNL :::::::::::::::::::::::::::::: gi|546 MELLCHEVDPVRRAVRDRNLLRDDRVLQNL 10 20 30 120 130 140 150 160 170 ha0046 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 40 50 60 70 80 90 180 190 200 210 220 230 ha0046 VPTPKSHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 VPTPKSHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN 100 110 120 130 140 150 240 250 260 270 280 290 ha0046 LAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 LAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA 160 170 180 190 200 210 300 310 320 330 340 350 ha0046 ICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDQRDGSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|546 ICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDQRDGSK 220 230 240 250 260 270 360 370 ha0046 SEDELDQASTPTDVRDIDL ::::::::::::::::::: gi|546 SEDELDQASTPTDVRDIDLL 280 290 >>gi|62898886|dbj|BAD97297.1| cyclin D2 variant [Homo sa (289 aa) initn: 1927 init1: 1927 opt: 1927 Z-score: 1958.2 bits: 370.7 E(): 2e-100 Smith-Waterman score: 1927; 99.654% identity (100.000% similar) in 289 aa overlap (90-378:1-289) 60 70 80 90 100 110 ha0046 RSPLPFQKTKTEKPFSRPGKAGGRGAAGLAMELLCHEVDPVRRAVRDRNLLRDDRVLQNL :::::::::::::::::::::::::::::: gi|628 MELLCHEVDPVRRAVRDRNLLRDDRVLQNL 10 20 30 120 130 140 150 160 170 ha0046 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 40 50 60 70 80 90 180 190 200 210 220 230 ha0046 VPTPKSHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN :::::::::::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|628 VPTPKSHLQLLGAICMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN 100 110 120 130 140 150 240 250 260 270 280 290 ha0046 LAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 LAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA 160 170 180 190 200 210 300 310 320 330 340 350 ha0046 ICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDQRDGSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 ICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDQRDGSK 220 230 240 250 260 270 360 370 ha0046 SEDELDQASTPTDVRDIDL ::::::::::::::::::: gi|628 SEDELDQASTPTDVRDIDL 280 >>gi|61365653|gb|AAX42741.1| cyclin D2 [synthetic constr (290 aa) initn: 1922 init1: 1922 opt: 1922 Z-score: 1953.1 bits: 369.7 E(): 3.8e-100 Smith-Waterman score: 1922; 99.654% identity (100.000% similar) in 289 aa overlap (90-378:1-289) 60 70 80 90 100 110 ha0046 RSPLPFQKTKTEKPFSRPGKAGGRGAAGLAMELLCHEVDPVRRAVRDRNLLRDDRVLQNL :::::::::::::::::::::::::::::: gi|613 MELLCHEVDPVRRAVRDRNLLRDDRVLQNL 10 20 30 120 130 140 150 160 170 ha0046 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 40 50 60 70 80 90 180 190 200 210 220 230 ha0046 VPTPKSHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 VPTPKSHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN 100 110 120 130 140 150 240 250 260 270 280 290 ha0046 LAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 LAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA 160 170 180 190 200 210 300 310 320 330 340 350 ha0046 ICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDQRDGSK ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|613 ICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDRRDGSK 220 230 240 250 260 270 360 370 ha0046 SEDELDQASTPTDVRDIDL ::::::::::::::::::: gi|613 SEDELDQASTPTDVRDIDLL 280 290 >>gi|61355683|gb|AAX41165.1| cyclin D2 [synthetic constr (289 aa) initn: 1920 init1: 1920 opt: 1920 Z-score: 1951.1 bits: 369.3 E(): 4.9e-100 Smith-Waterman score: 1920; 99.654% identity (99.654% similar) in 289 aa overlap (90-378:1-289) 60 70 80 90 100 110 ha0046 RSPLPFQKTKTEKPFSRPGKAGGRGAAGLAMELLCHEVDPVRRAVRDRNLLRDDRVLQNL :::::::::::::::::::::::::::::: gi|613 MELLCHEVDPVRRAVRDRNLLRDDRVLQNL 10 20 30 120 130 140 150 160 170 ha0046 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 40 50 60 70 80 90 180 190 200 210 220 230 ha0046 VPTPKSHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN ::::::::::::::::::::::::::::::::::::::::: :::::::::::::::::: gi|613 VPTPKSHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIMPQELLEWELVVLGKLKWN 100 110 120 130 140 150 240 250 260 270 280 290 ha0046 LAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 LAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA 160 170 180 190 200 210 300 310 320 330 340 350 ha0046 ICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDQRDGSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|613 ICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDQRDGSK 220 230 240 250 260 270 360 370 ha0046 SEDELDQASTPTDVRDIDL ::::::::::::::::::: gi|613 SEDELDQASTPTDVRDIDL 280 >>gi|73997778|ref|XP_854586.1| PREDICTED: similar to G1/ (289 aa) initn: 1813 init1: 1813 opt: 1813 Z-score: 1842.9 bits: 349.3 E(): 5.3e-94 Smith-Waterman score: 1813; 94.810% identity (96.886% similar) in 289 aa overlap (90-378:1-289) 60 70 80 90 100 110 ha0046 RSPLPFQKTKTEKPFSRPGKAGGRGAAGLAMELLCHEVDPVRRAVRDRNLLRDDRVLQNL ::::: ::::::::: : ::: :::::::: gi|739 MELLCCEVDPVRRAVPDANLLYDDRVLQNL 10 20 30 120 130 140 150 160 170 ha0046 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 40 50 60 70 80 90 180 190 200 210 220 230 ha0046 VPTPKSHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN :::::.::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|739 VPTPKTHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN 100 110 120 130 140 150 240 250 260 270 280 290 ha0046 LAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA ::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: gi|739 LAAVTPHDFIEHILRKLPQPSEKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA 160 170 180 190 200 210 300 310 320 330 340 350 ha0046 ICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDQRDGSK ::::::::.::::: :::..:::::::::::::::::::::.::::::::.:::: :::: gi|739 ICGLQQDEDVSSLTGDALVDLLAKITNTDVDCLKACQEQIEVVLLNSLQQFRQDQGDGSK 220 230 240 250 260 270 360 370 ha0046 SEDELDQASTPTDVRDIDL ::::::::::::::::::: gi|739 SEDELDQASTPTDVRDIDL 280 >>gi|122145325|sp|Q0P5D3|CCND2_BOVIN G1/S-specific cycli (289 aa) initn: 1808 init1: 1808 opt: 1808 Z-score: 1837.8 bits: 348.4 E(): 1e-93 Smith-Waterman score: 1808; 94.464% identity (97.232% similar) in 289 aa overlap (90-378:1-289) 60 70 80 90 100 110 ha0046 RSPLPFQKTKTEKPFSRPGKAGGRGAAGLAMELLCHEVDPVRRAVRDRNLLRDDRVLQNL ::::: ::.:::::: : :::.:::::::: gi|122 MELLCGEVEPVRRAVPDANLLHDDRVLQNL 10 20 30 120 130 140 150 160 170 ha0046 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|122 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAINYLDRFLAG 40 50 60 70 80 90 180 190 200 210 220 230 ha0046 VPTPKSHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN :::::.::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|122 VPTPKTHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN 100 110 120 130 140 150 240 250 260 270 280 290 ha0046 LAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA ::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: gi|122 LAAVTPHDFIEHILRKLPQPSEKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA 160 170 180 190 200 210 300 310 320 330 340 350 ha0046 ICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDQRDGSK ::::::::.::::: :::..:::::::::::::::::::::.::::::::::::: :::: gi|122 ICGLQQDEDVSSLTGDALVDLLAKITNTDVDCLKACQEQIEVVLLNSLQQYRQDQGDGSK 220 230 240 250 260 270 360 370 ha0046 SEDELDQASTPTDVRDIDL ::::::::::::::::::: gi|122 SEDELDQASTPTDVRDIDL 280 >>gi|75066003|sp|Q8WNW2|CCND2_PIG G1/S-specific cyclin-D (288 aa) initn: 1665 init1: 1665 opt: 1801 Z-score: 1830.7 bits: 347.1 E(): 2.5e-93 Smith-Waterman score: 1801; 94.464% identity (97.232% similar) in 289 aa overlap (90-378:1-288) 60 70 80 90 100 110 ha0046 RSPLPFQKTKTEKPFSRPGKAGGRGAAGLAMELLCHEVDPVRRAVRDRNLLRDDRVLQNL ::::: ::::::::: : :::.:::::::: gi|750 MELLCCEVDPVRRAVPDANLLHDDRVLQNL 10 20 30 120 130 140 150 160 170 ha0046 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|750 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAINYLDRFLAG 40 50 60 70 80 90 180 190 200 210 220 230 ha0046 VPTPKSHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN :::::.::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|750 VPTPKTHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN 100 110 120 130 140 150 240 250 260 270 280 290 ha0046 LAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA ::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: gi|750 LAAVTPHDFIEHILRKLPQPNEKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA 160 170 180 190 200 210 300 310 320 330 340 350 ha0046 ICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDQRDGSK ::::::::.::::: :::..:::.:::::::::::::::::.::::::::::::: :::: gi|750 ICGLQQDEDVSSLTGDALVDLLARITNTDVDCLKACQEQIEVVLLNSLQQYRQDQ-DGSK 220 230 240 250 260 360 370 ha0046 SEDELDQASTPTDVRDIDL ::::::::::::::::::: gi|750 SEDELDQASTPTDVRDIDL 270 280 >>gi|149049359|gb|EDM01813.1| cyclin D2, isoform CRA_d [ (288 aa) initn: 1689 init1: 1689 opt: 1795 Z-score: 1824.7 bits: 345.9 E(): 5.4e-93 Smith-Waterman score: 1795; 92.734% identity (97.924% similar) in 289 aa overlap (90-378:1-288) 60 70 80 90 100 110 ha0046 RSPLPFQKTKTEKPFSRPGKAGGRGAAGLAMELLCHEVDPVRRAVRDRNLLRDDRVLQNL ::::: ::::::::: ::::: .::::::: gi|149 MELLCCEVDPVRRAVPDRNLL-EDRVLQNL 10 20 120 130 140 150 160 170 ha0046 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG 30 40 50 60 70 80 180 190 200 210 220 230 ha0046 VPTPKSHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN :::::.::::::::::::::::::: ::::::::::::::.::::::::::::::::::: gi|149 VPTPKTHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSVKPQELLEWELVVLGKLKWN 90 100 110 120 130 140 240 250 260 270 280 290 ha0046 LAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA ::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: gi|149 LAAVTPHDFIEHILRKLPQQKEKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA 150 160 170 180 190 200 300 310 320 330 340 350 ha0046 ICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDQRDGSK ::::::::::..::::::::::::::.:::::::::::::::::::::::.::.:..::: gi|149 ICGLQQDEEVNALTCDALTELLAKITHTDVDCLKACQEQIEAVLLNSLQQFRQEQHNGSK 210 220 230 240 250 260 360 370 ha0046 SEDELDQASTPTDVRDIDL : .. :::.:::::::.:: gi|149 SVEDPDQATTPTDVRDVDL 270 280 >>gi|194211581|ref|XP_001494202.2| PREDICTED: similar to (289 aa) initn: 1794 init1: 1794 opt: 1794 Z-score: 1823.6 bits: 345.8 E(): 6.2e-93 Smith-Waterman score: 1794; 93.426% identity (96.540% similar) in 289 aa overlap (90-378:1-289) 60 70 80 90 100 110 ha0046 RSPLPFQKTKTEKPFSRPGKAGGRGAAGLAMELLCHEVDPVRRAVRDRNLLRDDRVLQNL ::::: ::::::::: : ::: :::::::: gi|194 MELLCCEVDPVRRAVPDANLLYDDRVLQNL 10 20 30 120 130 140 150 160 170 ha0046 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPLAMNYLDRFLAG ::::::::::::::::::::::::::::::::::::::::::::::::..:::::::::: gi|194 LTIEERYLPQCSYFKCVQKDIQPYMRRMVATWMLEVCEEQKCEEEVFPFGMNYLDRFLAG 40 50 60 70 80 90 180 190 200 210 220 230 ha0046 VPTPKSHLQLLGAVCMFLASKLKETSPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN :::::.::::::::::::::::::: :::::::::::::::::::::::::::::::::: gi|194 VPTPKTHLQLLGAVCMFLASKLKETIPLTAEKLCIYTDNSIKPQELLEWELVVLGKLKWN 100 110 120 130 140 150 240 250 260 270 280 290 ha0046 LAAVTPHDFIEHILRKLPQQREKLSLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA ::::::::::::::::::: .:: ::::::::::::::::::::::::::::::::::: gi|194 LAAVTPHDFIEHILRKLPQPNDKLPLIRKHAQTFIALCATDFKFAMYPPSMIATGSVGAA 160 170 180 190 200 210 300 310 320 330 340 350 ha0046 ICGLQQDEEVSSLTCDALTELLAKITNTDVDCLKACQEQIEAVLLNSLQQYRQDQRDGSK ::::::::.::::: :::..:::::::::::::::::::::.::::::::.:::: :::: gi|194 ICGLQQDEDVSSLTGDALVDLLAKITNTDVDCLKACQEQIEVVLLNSLQQFRQDQGDGSK 220 230 240 250 260 270 360 370 ha0046 SEDELDQASTPTDVRDIDL ::::::::::::::::::: gi|194 SEDELDQASTPTDVRDIDL 280 378 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Mon Aug 11 15:42:30 2008 done: Mon Aug 11 15:45:05 2008 Total Scan time: 802.700 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]