hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-15450681/chunk_1/iprscan-20080811-15450681.nocrc
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Query sequence: ha00462
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00385                                                  84.1    1.7e-20   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00385    1/1     150   234 ..     1    90 []    84.1  1.7e-20

Alignments of top-scoring domains:
SM00385: domain 1 of 1, from 150 to 234: score 84.1, E = 1.7e-20
                   *->dfLrrvakalnldpetlylAvnlldrfLseykvlkgyspsliAaaal
                      +++ +v+++ ++++e+++lA+n+ldrfL   ++ k  +++l++a ++
     ha00462   150    TWMLEVCEEQKCEEEVFPLAMNYLDRFLAGVPTPK-SHLQLLGAVCM 195  

                   ylAsKteeip.pwtktlfhytgylppelayteeeilemekllle<-*
                   +lAsK+ e+ + + + l+ yt++     + +++e+le+e+ +l    
     ha00462   196 FLASKLKETSpLTAEKLCIYTDN-----SIKPQELLEWELVVLG    234  

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