# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oha00539.fasta.nr -Q ha00539.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ha00539, 129 aa vs /cdna2/lib/nr/nr library 2779448989 residues in 8089198 sequences statistics sampled from 60000 to 8088234 sequences Expectation_n fit: rho(ln(x))= 4.3706+/-0.000181; mu= 9.3636+/- 0.010 mean_var=55.1031+/-11.057, 0's: 40 Z-trim: 41 B-trim: 4594 in 2/62 Lambda= 0.172777 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8089198) gi|12053185|emb|CAB66773.1| hypothetical protein [ ( 116) 780 201.6 2.5e-50 gi|68565322|sp|Q9NPB0.1|CF064_HUMAN RecName: Full= ( 183) 768 198.8 2.8e-49 gi|119624381|gb|EAX03976.1| chromosome 6 open read ( 224) 768 198.9 3.2e-49 gi|114607284|ref|XP_001173836.1| PREDICTED: simila ( 183) 762 197.3 7.8e-49 gi|109071025|ref|XP_001117110.1| PREDICTED: simila ( 183) 746 193.3 1.2e-47 gi|149732165|ref|XP_001500655.1| PREDICTED: simila ( 183) 650 169.4 2e-40 gi|73972785|ref|XP_850945.1| PREDICTED: similar to ( 183) 638 166.4 1.6e-39 gi|68565201|sp|Q8K190.1|CF064_MOUSE RecName: Full= ( 188) 616 160.9 7.2e-38 gi|109501194|ref|XP_223775.4| PREDICTED: similar t ( 303) 616 161.1 1e-37 gi|149031202|gb|EDL86209.1| similar to RIKEN cDNA ( 178) 604 157.9 5.5e-37 gi|122138728|sp|Q32L85.1|CF064_BOVIN RecName: Full ( 194) 535 140.7 8.8e-32 gi|149635701|ref|XP_001507427.1| PREDICTED: simila ( 234) 511 134.8 6.4e-30 gi|134024111|gb|AAI35739.1| LOC100124912 protein [ ( 200) 489 129.3 2.5e-28 gi|118088034|ref|XP_419479.2| PREDICTED: hypotheti ( 183) 442 117.5 8e-25 gi|209731498|gb|ACI66618.1| C6orf64 homolog [Salmo ( 178) 385 103.3 1.5e-20 gi|209738226|gb|ACI69982.1| C6orf64 homolog [Salmo ( 195) 385 103.3 1.6e-20 gi|55963446|emb|CAI12030.1| novel protein [Danio r ( 164) 384 103.0 1.7e-20 gi|221219878|gb|ACM08600.1| C6orf64 homolog [Salmo ( 178) 382 102.6 2.5e-20 gi|209735424|gb|ACI68581.1| C6orf64 homolog [Salmo ( 195) 376 101.1 7.5e-20 gi|210078947|gb|EEA29261.1| hypothetical protein B ( 110) 332 89.9 9.8e-17 gi|210085759|gb|EEA34210.1| hypothetical protein B ( 153) 332 90.0 1.3e-16 gi|209731634|gb|ACI66686.1| C6orf64 [Salmo salar] ( 152) 327 88.8 3e-16 gi|47214011|emb|CAG01524.1| unnamed protein produc ( 70) 323 87.5 3.3e-16 gi|72013551|ref|XP_781658.1| PREDICTED: hypothetic ( 185) 289 79.4 2.4e-13 gi|198421432|ref|XP_002130031.1| PREDICTED: simila ( 151) 269 74.3 6.6e-12 gi|156545996|ref|XP_001607723.1| PREDICTED: simila ( 153) 257 71.3 5.3e-11 gi|91086803|ref|XP_973509.1| PREDICTED: similar to ( 164) 255 70.9 7.9e-11 gi|157020939|gb|EAA03470.4| AGAP012642-PA [Anophel ( 192) 248 69.2 3e-10 gi|108883602|gb|EAT47827.1| conserved hypothetical ( 191) 246 68.7 4.2e-10 gi|157017517|gb|EAA08826.4| AGAP003667-PA [Anophel ( 192) 246 68.7 4.2e-10 gi|190626749|gb|EDV42273.1| GF17092 [Drosophila an ( 182) 237 66.4 1.9e-09 gi|194169076|gb|EDW83977.1| GK13395 [Drosophila wi ( 182) 234 65.7 3.2e-09 gi|167867938|gb|EDS31321.1| conserved hypothetical ( 190) 232 65.2 4.7e-09 gi|215499990|gb|EEC09484.1| conserved hypothetical ( 167) 229 64.4 7.2e-09 gi|212510189|gb|EEB13404.1| conserved hypothetical ( 97) 219 61.7 2.7e-08 gi|194185192|gb|EDW98803.1| GE10727 [Drosophila ya ( 177) 219 61.9 4.2e-08 gi|7301288|gb|AAF56417.1| CG13663 [Drosophila mela ( 177) 219 61.9 4.2e-08 gi|190656488|gb|EDV53720.1| GG12278 [Drosophila er ( 177) 219 61.9 4.2e-08 gi|194200793|gb|EDX14369.1| GD18226 [Drosophila si ( 177) 219 61.9 4.2e-08 gi|194129129|gb|EDW51172.1| GM17742 [Drosophila se ( 177) 219 61.9 4.2e-08 gi|194142498|gb|EDW58901.1| GJ10578 [Drosophila vi ( 181) 219 61.9 4.3e-08 gi|68051489|gb|AAY85008.1| IP06461p [Drosophila me ( 193) 219 62.0 4.5e-08 gi|193895004|gb|EDV93870.1| GH19568 [Drosophila gr ( 176) 216 61.2 7e-08 gi|54638838|gb|EAL28240.1| GA12444 [Drosophila pse ( 177) 216 61.2 7.1e-08 gi|193914849|gb|EDW13716.1| GI23864 [Drosophila mo ( 178) 214 60.7 1e-07 gi|14573800|gb|AAC47962.2| Hypothetical protein C1 ( 144) 195 55.9 2.3e-06 gi|221135787|ref|XP_002171304.1| PREDICTED: simila ( 152) 194 55.6 2.8e-06 gi|190583989|gb|EDV24059.1| hypothetical protein T ( 68) 188 53.9 4.3e-06 gi|193620101|ref|XP_001947332.1| PREDICTED: simila ( 195) 167 49.0 0.00036 gi|162692597|gb|EDQ78953.1| predicted protein [Phy ( 317) 159 47.2 0.0021 >>gi|12053185|emb|CAB66773.1| hypothetical protein [Homo (116 aa) initn: 780 init1: 780 opt: 780 Z-score: 1060.2 bits: 201.6 E(): 2.5e-50 Smith-Waterman score: 780; 100.000% identity (100.000% similar) in 116 aa overlap (14-129:1-116) 10 20 30 40 50 60 ha0053 NNSVTSFFHIRTKMLEAAQPQGSTSETPWNTAIPLPSCWDQSFLTNITFLKVLLWLVLLG ::::::::::::::::::::::::::::::::::::::::::::::: gi|120 MLEAAQPQGSTSETPWNTAIPLPSCWDQSFLTNITFLKVLLWLVLLG 10 20 30 40 70 80 90 100 110 120 ha0053 LFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGCEAIQGTLTAEQLERE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|120 LFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGCEAIQGTLTAEQLERE 50 60 70 80 90 100 ha0053 LQLRPLAGR ::::::::: gi|120 LQLRPLAGR 110 >>gi|68565322|sp|Q9NPB0.1|CF064_HUMAN RecName: Full=Unch (183 aa) initn: 768 init1: 768 opt: 768 Z-score: 1041.3 bits: 198.8 E(): 2.8e-49 Smith-Waterman score: 768; 100.000% identity (100.000% similar) in 114 aa overlap (16-129:70-183) 10 20 30 40 ha0053 NNSVTSFFHIRTKMLEAAQPQGSTSETPWNTAIPLPSCWDQSFLT :::::::::::::::::::::::::::::: gi|685 TLKAAPGWLKRFLVWKPRPASARAQPGLVQEAAQPQGSTSETPWNTAIPLPSCWDQSFLT 40 50 60 70 80 90 50 60 70 80 90 100 ha0053 NITFLKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|685 NITFLKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGC 100 110 120 130 140 150 110 120 ha0053 EAIQGTLTAEQLERELQLRPLAGR :::::::::::::::::::::::: gi|685 EAIQGTLTAEQLERELQLRPLAGR 160 170 180 >>gi|119624381|gb|EAX03976.1| chromosome 6 open reading (224 aa) initn: 768 init1: 768 opt: 768 Z-score: 1040.1 bits: 198.9 E(): 3.2e-49 Smith-Waterman score: 768; 100.000% identity (100.000% similar) in 114 aa overlap (16-129:111-224) 10 20 30 40 ha0053 NNSVTSFFHIRTKMLEAAQPQGSTSETPWNTAIPLPSCWDQSFLT :::::::::::::::::::::::::::::: gi|119 TLKAAPGWLKRFLVWKPRPASARAQPGLVQEAAQPQGSTSETPWNTAIPLPSCWDQSFLT 90 100 110 120 130 140 50 60 70 80 90 100 ha0053 NITFLKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NITFLKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGC 150 160 170 180 190 200 110 120 ha0053 EAIQGTLTAEQLERELQLRPLAGR :::::::::::::::::::::::: gi|119 EAIQGTLTAEQLERELQLRPLAGR 210 220 >>gi|114607284|ref|XP_001173836.1| PREDICTED: similar to (183 aa) initn: 762 init1: 762 opt: 762 Z-score: 1033.2 bits: 197.3 E(): 7.8e-49 Smith-Waterman score: 762; 99.123% identity (99.123% similar) in 114 aa overlap (16-129:70-183) 10 20 30 40 ha0053 NNSVTSFFHIRTKMLEAAQPQGSTSETPWNTAIPLPSCWDQSFLT ::::::::::: :::::::::::::::::: gi|114 TLKAAPGWLKRFLVWKPRPASARAQPGLVQEAAQPQGSTSEPPWNTAIPLPSCWDQSFLT 40 50 60 70 80 90 50 60 70 80 90 100 ha0053 NITFLKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 NITFLKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGC 100 110 120 130 140 150 110 120 ha0053 EAIQGTLTAEQLERELQLRPLAGR :::::::::::::::::::::::: gi|114 EAIQGTLTAEQLERELQLRPLAGR 160 170 180 >>gi|109071025|ref|XP_001117110.1| PREDICTED: similar to (183 aa) initn: 746 init1: 746 opt: 746 Z-score: 1011.7 bits: 193.3 E(): 1.2e-47 Smith-Waterman score: 746; 96.491% identity (97.368% similar) in 114 aa overlap (16-129:70-183) 10 20 30 40 ha0053 NNSVTSFFHIRTKMLEAAQPQGSTSETPWNTAIPLPSCWDQSFLT :: :::::::. ::: :::::::::::::: gi|109 TLKAASGWLKRFLVWKPRPASARAQPGLVQEAPQPQGSTSQPPWNIAIPLPSCWDQSFLT 40 50 60 70 80 90 50 60 70 80 90 100 ha0053 NITFLKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NITFLKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGC 100 110 120 130 140 150 110 120 ha0053 EAIQGTLTAEQLERELQLRPLAGR :::::::::::::::::::::::: gi|109 EAIQGTLTAEQLERELQLRPLAGR 160 170 180 >>gi|149732165|ref|XP_001500655.1| PREDICTED: similar to (183 aa) initn: 650 init1: 650 opt: 650 Z-score: 882.4 bits: 169.4 E(): 2e-40 Smith-Waterman score: 650; 88.596% identity (92.982% similar) in 114 aa overlap (16-129:70-183) 10 20 30 40 ha0053 NNSVTSFFHIRTKMLEAAQPQGSTSETPWNTAIPLPSCWDQSFLT ::::: .:::. : :::::::: :::.:: gi|149 TPRAASGWLKRFLGWKPRPASAQTQPSVAQEAAQPGSSTSQPPRNTAIPLPSPRDQSILT 40 50 60 70 80 90 50 60 70 80 90 100 ha0053 NITFLKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGC :::::::::::::::::::::::::::::::::::::::::: ::: ::::::::::::: gi|149 NITFLKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPGEKKAGEKSAYSVFNPGC 100 110 120 130 140 150 110 120 ha0053 EAIQGTLTAEQLERELQLRPLAGR :::::::::::.:::::.::: :: gi|149 EAIQGTLTAEQFERELQFRPLEGR 160 170 180 >>gi|73972785|ref|XP_850945.1| PREDICTED: similar to Pro (183 aa) initn: 638 init1: 638 opt: 638 Z-score: 866.2 bits: 166.4 E(): 1.6e-39 Smith-Waterman score: 638; 86.842% identity (93.860% similar) in 114 aa overlap (16-129:70-183) 10 20 30 40 ha0053 NNSVTSFFHIRTKMLEAAQPQGSTSETPWNTAIPLPSCWDQSFLT :.::: .:::. : :::::: : ::: :: gi|739 TPKAAPGWLTRFLVWKPRPASTRARPSLAQEVAQPGSSTSQPPRNTAIPLSSPRDQSVLT 40 50 60 70 80 90 50 60 70 80 90 100 ha0053 NITFLKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGC .:::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|739 SITFLKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPEERKEGEKSAYSVFNPGC 100 110 120 130 140 150 110 120 ha0053 EAIQGTLTAEQLERELQLRPLAGR :::::::::::::.:::.:::.:: gi|739 EAIQGTLTAEQLEHELQFRPLVGR 160 170 180 >>gi|68565201|sp|Q8K190.1|CF064_MOUSE RecName: Full=Unch (188 aa) initn: 613 init1: 613 opt: 616 Z-score: 836.4 bits: 160.9 E(): 7.2e-38 Smith-Waterman score: 616; 85.455% identity (91.818% similar) in 110 aa overlap (19-128:68-177) 10 20 30 40 ha0053 NNSVTSFFHIRTKMLEAAQPQGSTSETPWNTAIPLPSCWDQSFLTNIT ::: . .. : .::.:::: :::::::: gi|685 AAATPKTATGWLTRFLKRKANPAIAQAQPNQPQEAGQQLPESTAVPLPSSCRQSFLTNIT 40 50 60 70 80 90 50 60 70 80 90 100 ha0053 FLKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGCEAI :::::::::::::::::::::::::::.:::::::::::::::::::::::::::::::: gi|685 FLKVLLWLVLLGLFVELEFGLAYFVLSMFYWMYVGTRGPEEKKEGEKSAYSVFNPGCEAI 100 110 120 130 140 150 110 120 ha0053 QGTLTAEQLERELQLRPLAGR ::::::::::.:::::: : gi|685 QGTLTAEQLEQELQLRPPQGSRTSPSCSSYP 160 170 180 >>gi|109501194|ref|XP_223775.4| PREDICTED: similar to Pr (303 aa) initn: 611 init1: 611 opt: 616 Z-score: 833.6 bits: 161.1 E(): 1e-37 Smith-Waterman score: 616; 83.333% identity (87.719% similar) in 114 aa overlap (16-129:190-303) 10 20 30 40 ha0053 NNSVTSFFHIRTKMLEAAQPQGSTSETPWNTAIPLPSCWDQSFLT : : .: : ::.::.:::: ::::: gi|109 TSKTATGWLRRFLRWKASPVTAQAQPNQPQECALRSGLLSGIPWSTAVPLPSSCGQSFLT 160 170 180 190 200 210 50 60 70 80 90 100 ha0053 NITFLKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVFNPGC ::: ::::::::::::::::::::::::::.::::::::::: ::::::::::::::::: gi|109 NITVLKVLLWLVLLGLFVELEFGLAYFVLSMFYWMYVGTRGPGEKKEGEKSAYSVFNPGC 220 230 240 250 260 270 110 120 ha0053 EAIQGTLTAEQLERELQLRPLAGR :::::::::::::::::.:: :: gi|109 EAIQGTLTAEQLERELQIRPPQGR 280 290 300 >>gi|149031202|gb|EDL86209.1| similar to RIKEN cDNA 1810 (178 aa) initn: 604 init1: 604 opt: 604 Z-score: 820.5 bits: 157.9 E(): 5.5e-37 Smith-Waterman score: 604; 78.814% identity (87.288% similar) in 118 aa overlap (12-129:61-178) 10 20 30 40 ha0053 NNSVTSFFHIRTKMLEAAQPQGSTSETPWNTAIPLPSCWDQ : . . ::: .... .::.:::: : gi|149 SGTKAEPAAATSKTATGWLRRFLRWKASPVTAQAQPNQPQEAVQQPSQSTAVPLPSSCGQ 40 50 60 70 80 90 50 60 70 80 90 100 ha0053 SFLTNITFLKVLLWLVLLGLFVELEFGLAYFVLSLFYWMYVGTRGPEEKKEGEKSAYSVF ::::::: ::::::::::::::::::::::::::.::::::::::: ::::::::::::: gi|149 SFLTNITVLKVLLWLVLLGLFVELEFGLAYFVLSMFYWMYVGTRGPGEKKEGEKSAYSVF 100 110 120 130 140 150 110 120 ha0053 NPGCEAIQGTLTAEQLERELQLRPLAGR :::::::::::::::::::::.:: :: gi|149 NPGCEAIQGTLTAEQLERELQIRPPQGR 160 170 129 residues in 1 query sequences 2779448989 residues in 8089198 library sequences Tcomplib [34.26] (8 proc) start: Thu Apr 16 15:40:24 2009 done: Thu Apr 16 15:44:06 2009 Total Scan time: 645.270 Total Display time: 0.010 Function used was FASTA [version 34.26.5 April 26, 2007]