hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20090618/iprscan-20090618-13574875/chunk_1/iprscan-20090618-13574875.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: ha01215 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00122.10.fs E1-E2 ATPase 413.1 5.2e-125 1 PF00122.10.ls E1-E2 ATPase 415.0 9.5e-122 1 PF00689.11.ls Cation transporting ATPase, C-terminu 275.2 1.2e-79 1 PF00689.11.fs Cation transporting ATPase, C-terminu 273.3 4.5e-79 1 PF00690.16.fs Cation transporter/ATPase, N-terminus 102.4 1.1e-28 1 PF00690.16.ls Cation transporter/ATPase, N-terminus 104.3 3.3e-28 1 PF00702.16.fs haloacid dehalogenase-like hydrolase 72.0 2.8e-20 1 PF00702.16.ls haloacid dehalogenase-like hydrolase 74.0 4.4e-19 1 PF08282.2.fs haloacid dehalogenase-like hydrolase 18.1 1.5e-05 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00690.16.fs 1/1 38 121 .. 1 87 [] 102.4 1.1e-28 PF00690.16.ls 1/1 38 121 .. 1 87 [] 104.3 3.3e-28 PF00122.10.ls 1/1 137 385 .. 1 245 [] 415.0 9.5e-122 PF00122.10.fs 1/1 137 385 .. 1 245 [] 413.1 5.2e-125 PF00702.16.ls 1/1 389 768 .. 1 183 [] 74.0 4.4e-19 PF00702.16.fs 1/1 389 768 .. 1 183 [] 72.0 2.8e-20 PF08282.2.fs 1/1 746 791 .. 224 271 .] 18.1 1.5e-05 PF00689.11.ls 1/1 863 1034 .. 1 197 [] 275.2 1.2e-79 PF00689.11.fs 1/1 863 1034 .. 1 197 [] 273.3 4.5e-79 Alignments of top-scoring domains: PF00690.16.fs: domain 1 of 1, from 38 to 121: score 102.4, E = 1.1e-28 *->eelkke.vdldahkltvEevleklktdpeeGLsseeaaeRlkkyGpN + + ++++ +ah l+ +vl+++++ e GLs+++++ +++yGpN ha01215 38 ADGRAGgME-AAHLLPAADVLRHFSVTAEGGLSPAQVTGARERYGPN 83 eLppekktslwlkfLeQFkdplvllLlaAAiiSALdfvlgg<-* eLp e+++slw+++LeQF d+lv++Ll+AA++S fvl++ ha01215 84 ELPSEEGKSLWELVLEQFEDLLVRILLLAALVS---FVLAW 121 PF00690.16.ls: domain 1 of 1, from 38 to 121: score 104.3, E = 3.3e-28 *->eelkke.vdldahkltvEevleklktdpeeGLsseeaaeRlkkyGpN + + ++++ +ah l+ +vl+++++ e GLs+++++ +++yGpN ha01215 38 ADGRAGgME-AAHLLPAADVLRHFSVTAEGGLSPAQVTGARERYGPN 83 eLppekktslwlkfLeQFkdplvllLlaAAiiSALdfvlgg<-* eLp e+++slw+++LeQF d+lv++Ll+AA++S fvl++ ha01215 84 ELPSEEGKSLWELVLEQFEDLLVRILLLAALVS---FVLAW 121 PF00122.10.ls: domain 1 of 1, from 137 to 385: score 415.0, E = 9.5e-122 *->villivllnatlefyqesrAekAleaLkklvpptAtVlRdG.gkeee vi+li+++na+++++qe++Ae+A+eaLk++ p++ +V+R ++ + + ha01215 137 VIMLILVANAIVGVWQERNAESAIEALKEYEPEMGKVIRSDrKGVQR 183 ipaeeLvpGDiVevkpGdrVPADgrvveges.tLkVDESaLTGESlPVeK i a+++vpGDiVev++Gd+VPAD+r++e +s+tL+VD+S+LTGES+ V+K ha01215 184 IRARDIVPGDIVEVAVGDKVPADLRLIEIKStTLRVDQSILTGESVSVTK 233 hsdvvtp.dnp.lergnmVfaGTlvvsGsltgvVtatGddTflgkIakLV h+++++++++++++++nm+f+GT+++sG ++gv++atG +T+lgkI + + ha01215 234 HTEAIPDpRAVnQDKKNMLFSGTNITSGKAVGVAVATGLHTELGKIRSQM 283 eeAqssktPlQrlldkfgkiltpvililavlvfiiwllrnfn.aafggsw ++ ++tPlQr+ld+fg++l+ +i +++v+v++i+++ +f ++a+ggsw ha01215 284 AAVEPERTPLQRKLDEFGRQLSHAISVICVAVWVINIG-HFAdPAHGGSW 332 legllyalifavallVaAcPegLplvvtvalalGtgrmAkkgaLVKglpA l+g++y++++aval+VaA+PegLp+v+t++lalGt+rmA+k+a+V++lp+ ha01215 333 LRGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMARKNAIVRSLPS 382 vEt<-* vEt ha01215 383 VET 385 PF00122.10.fs: domain 1 of 1, from 137 to 385: score 413.1, E = 5.2e-125 *->villivllnatlefyqesrAekAleaLkklvpptAtVlRdG.gkeee vi+li+++na+++++qe++Ae+A+eaLk++ p++ +V+R ++ + + ha01215 137 VIMLILVANAIVGVWQERNAESAIEALKEYEPEMGKVIRSDrKGVQR 183 ipaeeLvpGDiVevkpGdrVPADgrvveges.tLkVDESaLTGESlPVeK i a+++vpGDiVev++Gd+VPAD+r++e +s+tL+VD+S+LTGES+ V+K ha01215 184 IRARDIVPGDIVEVAVGDKVPADLRLIEIKStTLRVDQSILTGESVSVTK 233 hsdvvtp.dnp.lergnmVfaGTlvvsGsltgvVtatGddTflgkIakLV h+++++++++++++++nm+f+GT+++sG ++gv++atG +T+lgkI + + ha01215 234 HTEAIPDpRAVnQDKKNMLFSGTNITSGKAVGVAVATGLHTELGKIRSQM 283 eeAqssktPlQrlldkfgkiltpvililavlvfiiwllrnfn.aafggsw ++ ++tPlQr+ld+fg++l+ +i +++v+v++i+++ +f ++a+ggsw ha01215 284 AAVEPERTPLQRKLDEFGRQLSHAISVICVAVWVINIG-HFAdPAHGGSW 332 legllyalifavallVaAcPegLplvvtvalalGtgrmAkkgaLVKglpA l+g++y++++aval+VaA+PegLp+v+t++lalGt+rmA+k+a+V++lp+ ha01215 333 LRGAVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMARKNAIVRSLPS 382 vEt<-* vEt ha01215 383 VET 385 PF00702.16.ls: domain 1 of 1, from 389 to 768: score 74.0, E = 4.4e-19 *->ikavvFDkDGTLtdgkeppiaeaiveaaaelgl......lpleevek + +++ Dk+GTLt+ + + +++v a a++g ++ + ++ ha01215 389 TSVICSDKTGTLTTN-QMSVCRMFVVAEADAGScllhefTISGTTYT 434 llgrgl.g...erilleggltaell......................... + g+ +g++++r ++ gl++++ +++ + ++ ++ ++ ++ ha01215 435 PEGEVRqGdqpVRCGQFDGLVELATicalcndsaldyneakgvyekvgea 484 .................................................. +++ + ++ + +++ ++ ++ + ++ + +++ + + +++ ha01215 485 tetaltclvekmnvfdtdlqalsrveragacntvikqlmrkeftlefsrd 534 .................................................. +++ + +++++++++ +++ ++ +++ ++ ++ + ++++ + +++ ha01215 535 rksmsvyctptrphptgqgskmfvkgapesviercssvrvgsrtapltpt 584 .................................................d +++ + ++ ++++++ + +++ ++++++ + ++ ++ ++d ha01215 585 sreqilakirdwgsgsdtlrclalatrdapprkedmelddcskfvqyetD 634 .evlglial.dklypgarealkaLkrrGikvailTggdr.naeallealg ++g++ d+++p++++ + ++ ++Gi+v+++Tg++ ++a+a+ ++lg ha01215 635 lTFVGCVGMlDPPRPEVAACITRCYQAGIRVVMITGDNKgTAVAICRRLG 684 la.lfdviidsdevggvgpivvgKPkpeifllalerlgvkpeevg..... +++ + + + +++g + + + ++r + +++ + ++ ha01215 685 IFgDTEDVAGKAYTG---------REFDDLSPEQQRQACRTARCFarvep 725 .............pe.vlmVGDgvnDapalaaAGvgvamgngg<-* ++++ ++ ++ e ++m GDgvnDapal++A +g+amg+g+ ha01215 726 ahksrivenlqsfNEiTAMTGDGVNDAPALKKAEIGIAMGSGT 768 PF00702.16.fs: domain 1 of 1, from 389 to 768: score 72.0, E = 2.8e-20 *->ikavvFDkDGTLtdgkeppiaeaiveaaaelgl......lpleevek + +++ Dk+GTLt+ + + +++v a a++g ++ + ++ ha01215 389 TSVICSDKTGTLTTN-QMSVCRMFVVAEADAGScllhefTISGTTYT 434 llgrgl.g...erilleggltaell......................... + g+ +g++++r ++ gl++++ +++ + ++ ++ ++ ++ ha01215 435 PEGEVRqGdqpVRCGQFDGLVELATicalcndsaldyneakgvyekvgea 484 .................................................. +++ + ++ + +++ ++ ++ + ++ + +++ + + +++ ha01215 485 tetaltclvekmnvfdtdlqalsrveragacntvikqlmrkeftlefsrd 534 .................................................. +++ + +++++++++ +++ ++ +++ ++ ++ + ++++ + +++ ha01215 535 rksmsvyctptrphptgqgskmfvkgapesviercssvrvgsrtapltpt 584 .................................................d +++ + ++ ++++++ + +++ ++++++ + ++ ++ ++d ha01215 585 sreqilakirdwgsgsdtlrclalatrdapprkedmelddcskfvqyetD 634 .evlglial.dklypgarealkaLkrrGikvailTggdr.naeallealg ++g++ d+++p++++ + ++ ++Gi+v+++Tg++ ++a+a+ ++lg ha01215 635 lTFVGCVGMlDPPRPEVAACITRCYQAGIRVVMITGDNKgTAVAICRRLG 684 la.lfdviidsdevggvgpivvgKPkpeifllalerlgvkpeevg..... +++ + + + +++g + + + ++r + +++ + ++ ha01215 685 IFgDTEDVAGKAYTG---------REFDDLSPEQQRQACRTARCFarvep 725 .............pe.vlmVGDgvnDapalaaAGvgvamgngg<-* ++++ ++ ++ e ++m GDgvnDapal++A +g+amg+g+ ha01215 726 ahksrivenlqsfNEiTAMTGDGVNDAPALKKAEIGIAMGSGT 768 PF08282.2.fs: domain 1 of 1, from 746 to 791: score 18.1, E = 1.5e-05 *->GDgeNDieMLelaGlgVAMgNAspevKaaAdyEvtgsNneedGVAka GDg ND + L+ a +g+AMg ++ +K+aA + v + n + a ha01215 746 GDGVNDAPALKKAEIGIAMGSGTAVAKSAAEM-VLSDDNF-ASIVAA 790 l<-* ha01215 791 V 791 PF00689.11.ls: domain 1 of 1, from 863 to 1034: score 275.2, E = 1.2e-79 *->RpPRnpkDeliitgllffrylviGvivavatlaaFvwwfygggenGi + PR+p e++i+g+lffryl+iGv+v++at+aa++wwf++++ ha01215 863 KLPRSPR-EALISGWLFFRYLAIGVYVGLATVAAATWWFVYDA---- 904 dfgPgllygqlthwescsandledsfkgqewCeifrkglefratTmaFtv +gP+++++ql+++ +cs + ++ f +++Ce+f+ + +tTma++v ha01215 905 -EGPHINFYQLRNFLKCSED--NPLF-AGIDCEVFE---SRFPTTMALSV 947 lVviqmfNAWEalncrsefFmhPldrnSlfqmgplwrNkwLllAvvlsla lV+i+m+N aln+ se ++Sl++m+p w N+wLl+Av+ s+a ha01215 948 LVTIEMCN---ALNSVSE-------NQSLLRMPP-WMNPWLLVAVAMSMA 986 lqllivYvPglqtiFqthpllslqeWlvvlpfsflvfildEirKfikRrr l++li+ vP+l+ iFq++pl s+ +W+vvl +s++v++ldE++K+++R + ha01215 987 LHFLILLVPPLPLIFQVTPL-SGRQWVVVLQISLPVILLDEALKYLSR-N 1034 <-* ha01215 - - PF00689.11.fs: domain 1 of 1, from 863 to 1034: score 273.3, E = 4.5e-79 *->RpPRnpkDeliitgllffrylviGvivavatlaaFvwwfygggenGi + PR+p e++i+g+lffryl+iGv+v++at+aa++wwf++++ ha01215 863 KLPRSPR-EALISGWLFFRYLAIGVYVGLATVAAATWWFVYDA---- 904 dfgPgllygqlthwescsandledsfkgqewCeifrkglefratTmaFtv +gP+++++ql+++ +cs + ++ f +++Ce+f+ + +tTma++v ha01215 905 -EGPHINFYQLRNFLKCSED--NPLF-AGIDCEVFE---SRFPTTMALSV 947 lVviqmfNAWEalncrsefFmhPldrnSlfqmgplwrNkwLllAvvlsla lV+i+m+N aln+ se ++Sl++m+p w N+wLl+Av+ s+a ha01215 948 LVTIEMCN---ALNSVSE-------NQSLLRMPP-WMNPWLLVAVAMSMA 986 lqllivYvPglqtiFqthpllslqeWlvvlpfsflvfildEirKfikRrr l++li+ vP+l+ iFq++pl s+ +W+vvl +s++v++ldE++K+++R + ha01215 987 LHFLILLVPPLPLIFQVTPL-SGRQWVVVLQISLPVILLDEALKYLSR-N 1034 <-* ha01215 - - //