hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-13574875/chunk_1/iprscan-20090618-13574875.nocrc
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Query sequence: ha01215
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
TIGR01116      ATPase-IIA1_Ca: calcium-translocating   1773.5          0   1
TIGR01494      ATPase_P-type: ATPase, P-type (transpo   429.8   1.2e-126   6

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
TIGR01116        1/1      97  1033 ..     1   800 []  1773.5        0
TIGR01494        1/6     137   240 ..     1   100 [.    91.4  9.2e-25
TIGR01494        2/6     289   420 ..   124   242 ..   117.5  1.3e-32
TIGR01494        4/6     636   686 ..   316   366 ..    67.7  5.3e-18
TIGR01494        5/6     713   837 ..   356   478 .]   141.6  7.2e-40

Alignments of top-scoring domains:
TIGR01116: domain 1 of 1, from 97 to 1033: score 1773.5, E = 0
                   *->vleQFEDtLVRILLlAAvVSFvLv.........aalVEPfVILLILv
                      vleQFED+LVRILLlAA VSFvL   ++++++++a+VEP+VI+LILv
     ha01215    97    VLEQFEDLLVRILLLAALVSFVLAwfeegeettTAFVEPLVIMLILV 143  

                   lNAiVGVWQErnAEkAIeALKeyesehalVlRdgre......akDLVPGD
                   +NAiVGVWQErnAE AIeALKeye+e+++V R +r++ ++ +a+D+VPGD
     ha01215   144 ANAIVGVWQERNAESAIEALKEYEPEMGKVIRSDRKgvqrirARDIVPGD 193  

                   IVEiaVGdkVPADvRllelk..sLkvDQSiLTGEsvsVnKhtesVpkerA
                   IVE+aVGdkVPAD+Rl e+k+++L+vDQSiLTGEsvsV Khte++p++rA
     ha01215   194 IVEVAVGDKVPADLRLIEIKstTLRVDQSILTGESVSVTKHTEAIPDPRA 243  

                   vvQdKknMlFsGTlVvaGkArGVVvrTGmnTEIGkIrdevreaeqedTPL
                   v+QdKknMlFsGT++  GkA GV v+TG  TE GkIr ++ + e e+TPL
     ha01215   244 VNQDKKNMLFSGTNITSGKAVGVAVATGLHTELGKIRSQMAAVEPERTPL 293  

                   kkKLDEFGelLsKvIgyICilVWViNighFn...........AiYYFKiA
                   + KLDEFG +Ls  I+ IC++VWViNighF ++ ++++  ++A+YYFKiA
     ha01215   294 QRKLDEFGRQLSHAISVICVAVWVINIGHFAdpahggswlrgAVYYFKIA 343  

                   VALAVAAIPEGLPAViTTCLALGtRKMAkkNAiVRkLPSVETLGCTTVIC
                   VALAVAAIPEGLPAViTTCLALGtR+MA+kNAiVR+LPSVETLGCT+VIC
     ha01215   344 VALAVAAIPEGLPAVITTCLALGTRRMARKNAIVRSLPSVETLGCTSVIC 393  

                   SDKTGTLTTNqMSVaklvale.........reFkVtGttYdPvggk....
                   SDKTGTLTTNqMSV++++++ + + ++   +eF++ GttY P+g++++++
     ha01215   394 SDKTGTLTTNQMSVCRMFVVAeadagscllHEFTISGTTYTPEGEVrqgd 443  

                   .......ikdLeelAqiaALCNDSkLivdkkk..vekvGeaTEaALkVLv
                   ++ + ++ ++L+elA+i+ALCNDS+L+++++k+ +ekvGeaTE+AL++Lv
     ha01215   444 qpvrcgqFDGLVELATICALCNDSALDYNEAKgvYEKVGEATETALTCLV 493  

                   EKiglpaakngkslksrpilgcnslwk....KkATLeFtRdRKSMSVlvk
                   EK++++++ +  ++  +++ +cn ++k+  +K++TLeF+RdRKSMSV+++
     ha01215   494 EKMNVFDTDLQALSRVERAGACNTVIKqlmrKEFTLEFSRDRKSMSVYCT 543  

                   .........snkLFvKGAPEevLercThIllkgsaVPLtekmkntiLasi
                   +++++++++++k+FvKGAPE v+erc+ ++++++  PLt+  + +iLa i
     ha01215   544 ptrphptgqGSKMFVKGAPESVIERCSSVRVGSRTAPLTPTSREQILAKI 593  

                   kem..sseALRCLAlAfke...................ESkLtfiGvvGl
                   + ++++s++LRCLAlA+++ ++++++ + ++ ++  + E++Ltf+G+vG+
     ha01215   594 RDWgsGSDTLRCLALATRDapprkedmelddcskfvqyETDLTFVGCVGM 643  

                   lDPPRpEVadAiekCReAGIrVImITGDnKETAeAicRrIGils......
                   lDPPRpEVa  i  C +AGIrV+mITGDnK+TA+AicRr Gi++++++  
     ha01215   644 LDPPRPEVAACITRCYQAGIRVVMITGDNKGTAVAICRRLGIFGdtedva 693  

                   ..SFTGrEFdemgpkk.......alvFSRvePsHKlrlVe.lqeqgqivA
                   ++++TGrEFd + p+++++  ++a++F+RveP HK+r+Ve+lq++++i+A
     ha01215   694 gkAYTGREFDDLSPEQqrqacrtARCFARVEPAHKSRIVEnLQSFNEITA 743  

                   MTGDGVNDAPALKkAdIGIAMGSGTeVAKeASdMVLADDNFATIVkAVeE
                   MTGDGVNDAPALKkA+IGIAMGSGT+VAK A++MVL DDNFA IV+AVeE
     ha01215   744 MTGDGVNDAPALKKAEIGIAMGSGTAVAKSAAEMVLSDDNFASIVAAVEE 793  

                   GRaIYNNmKqFIRYmISSNIGEVvsIFltsaLGi.eglipvQLLWVNLVT
                   GRaIY NmKqFIRY+ISSN+GEVv+IFlt+ LG++e+lipvQLLWVNLVT
     ha01215   794 GRAIYSNMKQFIRYLISSNVGEVVCIFLTAILGLpEALIPVQLLWVNLVT 843  

                   DGLPATALgFNpPDkDiMkkpPRredeSPLitgWlFfRYLViGvYVGlAT
                   DGLPATALgFNpPD+DiM k PR + e  Li+gWlFfRYL+iGvYVGlAT
     ha01215   844 DGLPATALGFNPPDLDIMEKLPRSPRE-ALISGWLFFRYLAIGVYVGLAT 892  

                   VigfiWw......................................Kqkas
                   V+++ Ww   + ++++ +  + ++  + +++++   + + +  ++  ++ 
     ha01215   893 VAAATWWfvydaegphinfyqlrnflkcsednplfagidcevfesRFPT- 941  

                   TlSLSVLVviEMfNALNALSEDsSLLripPweNkWLigAIcvSmaLHflI
                   T++LSVLV+iEM+NALN+ SE++SLLr+pPw N+WL++A++ SmaLHflI
     ha01215   942 TMALSVLVTIEMCNALNSVSENQSLLRMPPWMNPWLLVAVAMSMALHFLI 991  

                   LYVpllsaiFgvtPLsltdWlmvLkvSlPViLvDEvLKlfSR<-*
                   L Vp+l++iF+vtPLs  +W +vL +SlPViL+DE+LK  SR   
     ha01215   992 LLVPPLPLIFQVTPLSGRQWVVVLQISLPVILLDEALKYLSR    1033 

TIGR01494: domain 1 of 6, from 137 to 240: score 91.4, E = 9.2e-25
                   *->viliivllfvlletlqkeaaedalrslkdkelnpqkvtvlrn...gg
                      vi++i++++++++++q+++ae a+++lk+   +p++ +v+r++++g+
     ha01215   137    VIMLILVANAIVGVWQERNAESAIEALKE--YEPEMGKVIRSdrkGV 181  

                   veisskdlvvGDiVlvkkGdivPADgvLL...sgscyVdessLTGEsnpv
                   ++i+++d+v+GDiV+v+ Gd+vPAD++L++ +s+++ Vd+s+LTGEs+ v
     ha01215   182 QRIRARDIVPGDIVEVAVGDKVPADLRLIeikSTTLRVDQSILTGESVSV 231  

                   lKtdapfag<-*
                   +K+ +++ +   
     ha01215   232 TKHTEAIPD    240  

TIGR01494: domain 2 of 6, from 289 to 420: score 117.5, E = 1.3e-32
                   *->ektplqrkldrlafifilfllllalsvflltliglwt..........
                      e+tplqrkld+++  +  ++ +++++v+++ + ++ ++ ++++  ++
     ha01215   289    ERTPLQRKLDEFGRQLSHAISVICVAVWVINIGHFADpahggswlrg 335  

                   ffkiflralillviaiPiaLpvavtialavgdkrma...ilvrslnalEe
                    +++f +a++l+v+aiP++Lp+++t++la+g++rma+++++vrsl+++E+
     ha01215   336 AVYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMArknAIVRSLPSVET 385  

                   lGqvdyicsDKTGTLTenkmtfkkvyiggeyqags<-*
                   lG+ ++icsDKTGTLT+n+m++ ++ +  e+ ags   
     ha01215   386 LGCTSVICSDKTGTLTTNQMSVCRMFVVAEADAGS    420  

TIGR01494: domain 4 of 6, from 636 to 686: score 67.7, E = 5.3e-18
                   *->ellGltaieDpLredvketIeeLkraGikvwMlTGDnveTAiaIAke
                      +++G++++ Dp+r++v+ +I  + +aGi+v+M+TGDn++TA+aI+++
     ha01215   636    TFVGCVGMLDPPRPEVAACITRCYQAGIRVVMITGDNKGTAVAICRR 682  

                   cglf<-*
                   +g+f   
     ha01215   683 LGIF    686  

TIGR01494: domain 5 of 6, from 713 to 837: score 141.6, E = 7.2e-40
                   *->AiaIAkecglfARvsPeqKaeiVellqkrgaiVamiGDGaNDapALk
                      A+++A +c  fARv P +K +iVe lq   +i+am+GDG+NDapALk
     ha01215   713    ACRTA-RC--FARVEPAHKSRIVENLQSFNEITAMTGDGVNDAPALK 756  

                   aADVGiaig.....AkaaaDivltddnlslivlllvhGRwtykrikklil
                   +A +Gia+g+++  Ak aa +vl ddn+++iv ++++GR +y+++k++i 
     ha01215   757 KAEIGIAMGsgtavAKSAAEMVLSDDNFASIVAAVEEGRAIYSNMKQFIR 806  

                   yalyynliliillfvlsvinllftslpalal<-*
                   y++++n+++++++f+ +++ l    +p+ +l   
     ha01215   807 YLISSNVGEVVCIFLTAILGLPEALIPVQLL    837  

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