# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oha01636.fasta.nr -Q ha01636.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ha01636, 316 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6841187 sequences Expectation_n fit: rho(ln(x))= 5.0512+/-0.000186; mu= 10.5144+/- 0.010 mean_var=71.4652+/-13.935, 0's: 43 Z-trim: 59 B-trim: 781 in 1/66 Lambda= 0.151714 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|21397158|gb|AAM51826.1|AF517525_1 cyclin D3 [Ho ( 292) 1953 436.2 3.1e-120 gi|20981685|sp|P30281|CCND3_HUMAN G1/S-specific cy ( 292) 1949 435.3 5.6e-120 gi|60654231|gb|AAX29808.1| cyclin D3 [synthetic co ( 293) 1949 435.3 5.6e-120 gi|157939803|gb|ABW05542.1| cyclin D3 (predicted) ( 292) 1946 434.7 8.9e-120 gi|60822866|gb|AAX36623.1| cyclin D3 [synthetic co ( 292) 1936 432.5 4e-119 gi|115312216|sp|Q3MHH5|CCND3_BOVIN G1/S-specific c ( 292) 1923 429.7 2.9e-118 gi|186886482|gb|ACC93617.1| Ccnd3 [Ovis aries] ( 292) 1916 428.1 8.4e-118 gi|184185441|gb|ACC68848.1| cyclin D3 (predicted) ( 292) 1911 427.0 1.8e-117 gi|115522019|gb|ABJ09399.1| cyclin D3 [Sus scrofa] ( 292) 1911 427.0 1.8e-117 gi|231744|sp|P30282|CCND3_MOUSE G1/S-specific cycl ( 292) 1860 415.9 4.1e-114 gi|74197181|dbj|BAE35136.1| unnamed protein produc ( 292) 1855 414.8 8.8e-114 gi|13278570|gb|AAH04076.1| Cyclin D3 [Mus musculus ( 292) 1844 412.4 4.7e-113 gi|109071150|ref|XP_001086510.1| PREDICTED: cyclin ( 291) 1836 410.6 1.6e-112 gi|148691626|gb|EDL23573.1| mCG15576, isoform CRA_ ( 289) 1820 407.1 1.8e-111 gi|1345742|sp|P48961|CCND3_RAT G1/S-specific cycli ( 293) 1816 406.2 3.3e-111 gi|126309863|ref|XP_001370590.1| PREDICTED: simila ( 292) 1736 388.7 6.1e-106 gi|90078112|dbj|BAE88736.1| unnamed protein produc ( 237) 1556 349.3 3.8e-94 gi|148691623|gb|EDL23570.1| mCG15576, isoform CRA_ ( 237) 1519 341.2 1e-91 gi|62089236|dbj|BAD93062.1| cyclin D3 variant [Hom ( 288) 1491 335.1 8.4e-90 gi|119624481|gb|EAX04076.1| cyclin D3, isoform CRA ( 242) 1485 333.7 1.8e-89 gi|109071152|ref|XP_001086274.1| PREDICTED: cyclin ( 242) 1483 333.3 2.5e-89 gi|56204980|emb|CAI23490.1| cyclin D3 [Homo sapien ( 242) 1481 332.8 3.3e-89 gi|193786248|dbj|BAG51531.1| unnamed protein produ ( 242) 1480 332.6 3.9e-89 gi|194223500|ref|XP_001918037.1| PREDICTED: simila ( 253) 1460 328.3 8.3e-88 gi|73972799|ref|XP_852046.1| PREDICTED: similar to ( 242) 1456 327.4 1.5e-87 gi|53130850|emb|CAG31754.1| hypothetical protein [ ( 292) 1398 314.7 1.1e-83 gi|112280279|gb|ABI14673.1| cyclin D3 [Oryctolagus ( 214) 1382 311.1 1e-82 gi|119624477|gb|EAX04072.1| cyclin D3, isoform CRA ( 211) 1377 310.0 2.1e-82 gi|193787061|dbj|BAG51884.1| unnamed protein produ ( 211) 1373 309.2 3.9e-82 gi|73972795|ref|XP_864857.1| PREDICTED: similar to ( 211) 1346 303.2 2.4e-80 gi|1705785|sp|P53782|CCND2_XENLA G1/S-specific cyc ( 291) 1258 284.1 1.9e-74 gi|76779695|gb|AAI06704.1| MGC132398 protein [Xeno ( 291) 1249 282.1 7.4e-74 gi|1705784|sp|P49706|CCND2_CHICK G1/S-specific cyc ( 291) 1247 281.7 1e-73 gi|180016|gb|AAA51929.1| cyclin D3 ( 186) 1238 279.6 2.8e-73 gi|126340068|ref|XP_001365985.1| PREDICTED: simila ( 290) 1210 273.6 2.7e-71 gi|73997778|ref|XP_854586.1| PREDICTED: similar to ( 289) 1201 271.6 1.1e-70 gi|126631726|gb|AAI33932.1| Zgc:162280 protein [Da ( 298) 1197 270.8 2e-70 gi|194211581|ref|XP_001494202.2| PREDICTED: simila ( 289) 1196 270.5 2.3e-70 gi|75066003|sp|Q8WNW2|CCND2_PIG G1/S-specific cycl ( 288) 1195 270.3 2.7e-70 gi|231742|sp|P30280|CCND2_MOUSE G1/S-specific cycl ( 289) 1187 268.6 9e-70 gi|47221876|emb|CAF98888.1| unnamed protein produc ( 297) 1186 268.3 1.1e-69 gi|122145325|sp|Q0P5D3|CCND2_BOVIN G1/S-specific c ( 289) 1184 267.9 1.4e-69 gi|149049359|gb|EDM01813.1| cyclin D2, isoform CRA ( 288) 1183 267.7 1.6e-69 gi|416789|sp|Q04827|CCND2_RAT G1/S-specific cyclin ( 288) 1178 266.6 3.5e-69 gi|231741|sp|P30279|CCND2_HUMAN G1/S-specific cycl ( 289) 1173 265.5 7.5e-69 gi|54696554|gb|AAV38649.1| cyclin D2 [synthetic co ( 290) 1173 265.5 7.5e-69 gi|62898886|dbj|BAD97297.1| cyclin D2 variant [Hom ( 289) 1172 265.3 8.7e-69 gi|61365653|gb|AAX42741.1| cyclin D2 [synthetic co ( 290) 1172 265.3 8.8e-69 gi|61355683|gb|AAX41165.1| cyclin D2 [synthetic co ( 289) 1171 265.1 1e-68 gi|577335|dbj|BAA03815.1| cyclin D2 [Rattus norveg ( 288) 1160 262.6 5.4e-68 >>gi|21397158|gb|AAM51826.1|AF517525_1 cyclin D3 [Homo s (292 aa) initn: 1953 init1: 1953 opt: 1953 Z-score: 2313.9 bits: 436.2 E(): 3.1e-120 Smith-Waterman score: 1953; 100.000% identity (100.000% similar) in 292 aa overlap (25-316:1-292) 10 20 30 40 50 60 ha0163 RSPARRLPWDSRARTPALPVRCPSMELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE :::::::::::::::::::::::::::::::::::: gi|213 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE 10 20 30 70 80 90 100 110 120 ha0163 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK 40 50 60 70 80 90 130 140 150 160 170 180 ha0163 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI 100 110 120 130 140 150 190 200 210 220 230 240 ha0163 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG 160 170 180 190 200 210 250 260 270 280 290 300 ha0163 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|213 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQ 220 230 240 250 260 270 310 ha0163 GPSQTSTPTDVTAIHL :::::::::::::::: gi|213 GPSQTSTPTDVTAIHL 280 290 >>gi|20981685|sp|P30281|CCND3_HUMAN G1/S-specific cyclin (292 aa) initn: 1949 init1: 1949 opt: 1949 Z-score: 2309.1 bits: 435.3 E(): 5.6e-120 Smith-Waterman score: 1949; 99.658% identity (100.000% similar) in 292 aa overlap (25-316:1-292) 10 20 30 40 50 60 ha0163 RSPARRLPWDSRARTPALPVRCPSMELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE :::::::::::::::::::::::::::::::::::: gi|209 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE 10 20 30 70 80 90 100 110 120 ha0163 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK 40 50 60 70 80 90 130 140 150 160 170 180 ha0163 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI 100 110 120 130 140 150 190 200 210 220 230 240 ha0163 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|209 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG 160 170 180 190 200 210 250 260 270 280 290 300 ha0163 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQ ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|209 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQ 220 230 240 250 260 270 310 ha0163 GPSQTSTPTDVTAIHL :::::::::::::::: gi|209 GPSQTSTPTDVTAIHL 280 290 >>gi|60654231|gb|AAX29808.1| cyclin D3 [synthetic constr (293 aa) initn: 1949 init1: 1949 opt: 1949 Z-score: 2309.1 bits: 435.3 E(): 5.6e-120 Smith-Waterman score: 1949; 99.658% identity (100.000% similar) in 292 aa overlap (25-316:1-292) 10 20 30 40 50 60 ha0163 RSPARRLPWDSRARTPALPVRCPSMELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE :::::::::::::::::::::::::::::::::::: gi|606 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE 10 20 30 70 80 90 100 110 120 ha0163 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK 40 50 60 70 80 90 130 140 150 160 170 180 ha0163 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI 100 110 120 130 140 150 190 200 210 220 230 240 ha0163 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|606 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG 160 170 180 190 200 210 250 260 270 280 290 300 ha0163 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQ ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|606 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREASQTSSSPAPKAPRGSSSQ 220 230 240 250 260 270 310 ha0163 GPSQTSTPTDVTAIHL :::::::::::::::: gi|606 GPSQTSTPTDVTAIHLL 280 290 >>gi|157939803|gb|ABW05542.1| cyclin D3 (predicted) [Pap (292 aa) initn: 1946 init1: 1946 opt: 1946 Z-score: 2305.6 bits: 434.7 E(): 8.9e-120 Smith-Waterman score: 1946; 99.658% identity (100.000% similar) in 292 aa overlap (25-316:1-292) 10 20 30 40 50 60 ha0163 RSPARRLPWDSRARTPALPVRCPSMELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE :::::::::::::::::::::::::::::::::::: gi|157 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE 10 20 30 70 80 90 100 110 120 ha0163 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK 40 50 60 70 80 90 130 140 150 160 170 180 ha0163 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI 100 110 120 130 140 150 190 200 210 220 230 240 ha0163 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 AHDFLALILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG 160 170 180 190 200 210 250 260 270 280 290 300 ha0163 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|157 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQ 220 230 240 250 260 270 310 ha0163 GPSQTSTPTDVTAIHL :::::::::::::::: gi|157 GPSQTSTPTDVTAIHL 280 290 >>gi|60822866|gb|AAX36623.1| cyclin D3 [synthetic constr (292 aa) initn: 1936 init1: 1936 opt: 1936 Z-score: 2293.8 bits: 432.5 E(): 4e-119 Smith-Waterman score: 1936; 99.658% identity (99.658% similar) in 292 aa overlap (25-316:1-292) 10 20 30 40 50 60 ha0163 RSPARRLPWDSRARTPALPVRCPSMELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE :::::::::::::::::::::::::::::::::::: gi|608 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE 10 20 30 70 80 90 100 110 120 ha0163 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK :::::::::::::::::::::::::::::::::::::::::::::::::::::: ::::: gi|608 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSRVPTRK 40 50 60 70 80 90 130 140 150 160 170 180 ha0163 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI 100 110 120 130 140 150 190 200 210 220 230 240 ha0163 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG 160 170 180 190 200 210 250 260 270 280 290 300 ha0163 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQ 220 230 240 250 260 270 310 ha0163 GPSQTSTPTDVTAIHL :::::::::::::::: gi|608 GPSQTSTPTDVTAIHL 280 290 >>gi|115312216|sp|Q3MHH5|CCND3_BOVIN G1/S-specific cycli (292 aa) initn: 1923 init1: 1923 opt: 1923 Z-score: 2278.4 bits: 429.7 E(): 2.9e-118 Smith-Waterman score: 1923; 98.288% identity (99.315% similar) in 292 aa overlap (25-316:1-292) 10 20 30 40 50 60 ha0163 RSPARRLPWDSRARTPALPVRCPSMELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE :::::::::::::::::::::::::::::::::::: gi|115 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE 10 20 30 70 80 90 100 110 120 ha0163 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK 40 50 60 70 80 90 130 140 150 160 170 180 ha0163 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|115 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHSVSPRQLRDWEVLVLGKLKWDLAAVI 100 110 120 130 140 150 190 200 210 220 230 240 ha0163 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 AHDFLALILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG 160 170 180 190 200 210 250 260 270 280 290 300 ha0163 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQ ::: ::::::::::::.::::::::::::::::::::::::::::: ::::::::::::: gi|115 ACSTSGDELTELLAGIAGTEVDCLRACQEQIEAALRESLREAAQTSPSPAPKAPRGSSSQ 220 230 240 250 260 270 310 ha0163 GPSQTSTPTDVTAIHL :::::::::::::::: gi|115 GPSQTSTPTDVTAIHL 280 290 >>gi|186886482|gb|ACC93617.1| Ccnd3 [Ovis aries] gi| (292 aa) initn: 1916 init1: 1916 opt: 1916 Z-score: 2270.1 bits: 428.1 E(): 8.4e-118 Smith-Waterman score: 1916; 98.288% identity (98.973% similar) in 292 aa overlap (25-316:1-292) 10 20 30 40 50 60 ha0163 RSPARRLPWDSRARTPALPVRCPSMELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE :::::::::::::::::::::::::::::::::::: gi|186 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE 10 20 30 70 80 90 100 110 120 ha0163 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK 40 50 60 70 80 90 130 140 150 160 170 180 ha0163 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|186 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHSVSPRQLRDWEVLVLGKLKWDLAAVI 100 110 120 130 140 150 190 200 210 220 230 240 ha0163 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 AHDFLALILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG 160 170 180 190 200 210 250 260 270 280 290 300 ha0163 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQ ::: :::::::::::::::::::::::::::::::::::::::::: :::::::: :::: gi|186 ACSTSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSPSPAPKAPRVSSSQ 220 230 240 250 260 270 310 ha0163 GPSQTSTPTDVTAIHL :::::::::::::::: gi|186 GPSQTSTPTDVTAIHL 280 290 >>gi|184185441|gb|ACC68848.1| cyclin D3 (predicted) [Rhi (292 aa) initn: 1911 init1: 1911 opt: 1911 Z-score: 2264.2 bits: 427.0 E(): 1.8e-117 Smith-Waterman score: 1911; 97.603% identity (99.315% similar) in 292 aa overlap (25-316:1-292) 10 20 30 40 50 60 ha0163 RSPARRLPWDSRARTPALPVRCPSMELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE :::::::::::::::::::::::::::::::::::: gi|184 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE 10 20 30 70 80 90 100 110 120 ha0163 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK :::::::::::::.::::::::::::::::::::::::::::::::::::::::::::.: gi|184 RYVPRASYFQCVQKEIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTHK 40 50 60 70 80 90 130 140 150 160 170 180 ha0163 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|184 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI 100 110 120 130 140 150 190 200 210 220 230 240 ha0163 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG ::::::.:::::::: :::::::::::::::::::::::::::::::::::::::::::: gi|184 AHDFLALILHRLSLPSDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG 160 170 180 190 200 210 250 260 270 280 290 300 ha0163 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQ :::.:::::::::::::::::::::::::::::::::::::::.:: ::::::::::::: gi|184 ACSISGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAKTSPSPAPKAPRGSSSQ 220 230 240 250 260 270 310 ha0163 GPSQTSTPTDVTAIHL :::::::::::::::: gi|184 GPSQTSTPTDVTAIHL 280 290 >>gi|115522019|gb|ABJ09399.1| cyclin D3 [Sus scrofa] (292 aa) initn: 1911 init1: 1911 opt: 1911 Z-score: 2264.2 bits: 427.0 E(): 1.8e-117 Smith-Waterman score: 1911; 97.603% identity (98.973% similar) in 292 aa overlap (25-316:1-292) 10 20 30 40 50 60 ha0163 RSPARRLPWDSRARTPALPVRCPSMELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE ::::::::::::::::::::. :::::::::::::: gi|115 MELLCCEGTRHAPRAGPDPRVGGDQRVLQSLLRLEE 10 20 30 70 80 90 100 110 120 ha0163 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|115 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK 40 50 60 70 80 90 130 140 150 160 170 180 ha0163 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|115 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHSVSPRQLRDWEVLVLGKLKWDLAAVI 100 110 120 130 140 150 190 200 210 220 230 240 ha0163 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG ::::::.:::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|115 AHDFLALILHRLALPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG 160 170 180 190 200 210 250 260 270 280 290 300 ha0163 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQ ::: :::::::::::::::::::::::::::::::::::::::::: ::::::::::::: gi|115 ACSTSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSPSPAPKAPRGSSSQ 220 230 240 250 260 270 310 ha0163 GPSQTSTPTDVTAIHL :::::::::::::::: gi|115 GPSQTSTPTDVTAIHL 280 290 >>gi|231744|sp|P30282|CCND3_MOUSE G1/S-specific cyclin-D (292 aa) initn: 1860 init1: 1860 opt: 1860 Z-score: 2203.9 bits: 415.9 E(): 4.1e-114 Smith-Waterman score: 1860; 94.863% identity (98.630% similar) in 292 aa overlap (25-316:1-292) 10 20 30 40 50 60 ha0163 RSPARRLPWDSRARTPALPVRCPSMELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE :::::::::::::::::::::::::::::::::::: gi|231 MELLCCEGTRHAPRAGPDPRLLGDQRVLQSLLRLEE 10 20 30 70 80 90 100 110 120 ha0163 RYVPRASYFQCVQREIKPHMRKMLAYWMLEVCEEQRCEEEVFPLAMNYLDRYLSCVPTRK :::::::::::::.:::::::::::::::::::::::::.:::::::::::::::::::: gi|231 RYVPRASYFQCVQKEIKPHMRKMLAYWMLEVCEEQRCEEDVFPLAMNYLDRYLSCVPTRK 40 50 60 70 80 90 130 140 150 160 170 180 ha0163 AQLQLLGAVCMLLASKLRETTPLTIEKLCIYTDHAVSPRQLRDWEVLVLGKLKWDLAAVI :::::::.::.::::::::::::::::::::::.::.: :::.::::::::::::::::: gi|231 AQLQLLGTVCLLLASKLRETTPLTIEKLCIYTDQAVAPWQLREWEVLVLGKLKWDLAAVI 100 110 120 130 140 150 190 200 210 220 230 240 ha0163 AHDFLAFILHRLSLPRDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVQGLG ::::::.:::::::: :::::::::::::::::::::::::::::::::::::::: ::: gi|231 AHDFLALILHRLSLPSDRQALVKKHAQTFLALCATDYTFAMYPPSMIATGSIGAAVLGLG 160 170 180 190 200 210 250 260 270 280 290 300 ha0163 ACSMSGDELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTSSSPAPKAPRGSSSQ :::::.:::::::::::::::::::::::::::::::::::::::. ::.:::::::::: gi|231 ACSMSADELTELLAGITGTEVDCLRACQEQIEAALRESLREAAQTAPSPVPKAPRGSSSQ 220 230 240 250 260 270 310 ha0163 GPSQTSTPTDVTAIHL :::::::::::::::: gi|231 GPSQTSTPTDVTAIHL 280 290 316 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Mon Aug 11 18:07:59 2008 done: Mon Aug 11 18:10:39 2008 Total Scan time: 749.170 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]