hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090630/iprscan-20090630-19223353/chunk_1/iprscan-20090630-19223353.nocrc
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Query sequence: ha01927s1
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF05672.2.ls MAP7 (E-MAP-115) family                        357.3   2.3e-104   1
PF05672.2.fs MAP7 (E-MAP-115) family                        355.5   8.2e-104   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF05672.2.fs   1/1     590   760 ..     1   193 []   355.5 8.2e-104
PF05672.2.ls   1/1     590   760 ..     1   193 []   357.3 2.3e-104

Alignments of top-scoring domains:
PF05672.2.fs: domain 1 of 1, from 590 to 760: score 355.5, E = 8.2e-104
                   *->APgkaensaAlsKptAGTTDaeEAtrLLAEKRRqAReQrEkEEqERr
                      AP++++n++A++K++AGTTD+eEAtrLLAEKRR+AReQrEkEE+ERr
   ha01927s1   590    APSSTVNASASVKTSAGTTDPEEATRLLAEKRRLAREQREKEERERR 636  

                   eqeErdrrkREElkrraaEeRtlrrEeEARrrEeeraRekeekKKqEGEE
                   eqeE++r+kREEl++r+aEeRt+rrEeE+Rr+E+e+aRekee+       
   ha01927s1   637 EQEELERQKREELAQRVAEERTTRREEESRRLEAEQAREKEEQ------- 679  

                   KRKAGEElkRkAEEeLLLKekrEqEeqErAmiqkQKEeAEaraREeAErv
                          l+R+AEE+    ++rE+Ee+Er  +q+QKEe Ear+REeAErv
   ha01927s1   680 -------LQRQAEER----ALREREEAER--AQRQKEE-EARVREEAERV 715  

                   RlEREkhfqqeEQERlERkKRLeEIMKRTRksevsekVKkeDskeG<-*
                   R+EREkhfq+eEQERlERkKRLeEIMKRTR++e+++k K++D+++G   
   ha01927s1   716 RQEREKHFQREEQERLERKKRLEEIMKRTRRTEATDK-KTSDQRNG    760  

PF05672.2.ls: domain 1 of 1, from 590 to 760: score 357.3, E = 2.3e-104
                   *->APgkaensaAlsKptAGTTDaeEAtrLLAEKRRqAReQrEkEEqERr
                      AP++++n++A++K++AGTTD+eEAtrLLAEKRR+AReQrEkEE+ERr
   ha01927s1   590    APSSTVNASASVKTSAGTTDPEEATRLLAEKRRLAREQREKEERERR 636  

                   eqeErdrrkREElkrraaEeRtlrrEeEARrrEeeraRekeekKKqEGEE
                   eqeE++r+kREEl++r+aEeRt+rrEeE+Rr+E+e+aRekee+       
   ha01927s1   637 EQEELERQKREELAQRVAEERTTRREEESRRLEAEQAREKEEQ------- 679  

                   KRKAGEElkRkAEEeLLLKekrEqEeqErAmiqkQKEeAEaraREeAErv
                          l+R+AEE+    ++rE+Ee+Er  +q+QKEe Ear+REeAErv
   ha01927s1   680 -------LQRQAEER----ALREREEAER--AQRQKEE-EARVREEAERV 715  

                   RlEREkhfqqeEQERlERkKRLeEIMKRTRksevsekVKkeDskeG<-*
                   R+EREkhfq+eEQERlERkKRLeEIMKRTR++e+++k K++D+++G   
   ha01927s1   716 RQEREKHFQREEQERLERKKRLEEIMKRTRRTEATDK-KTSDQRNG    760  

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