hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-14041826/chunk_1/iprscan-20090618-14041826.nocrc
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Query sequence: ha02351
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF00487.14.ls Fatty acid desaturase                     282.9    5.6e-82   1
PF00487.14.fs Fatty acid desaturase                     281.2    1.9e-81   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF00487.14.fs   1/1     103   328 ..     1   295 []   281.2  1.9e-81
PF00487.14.ls   1/1     103   328 ..     1   295 []   282.9  5.6e-82

Alignments of top-scoring domains:
PF00487.14.fs: domain 1 of 1, from 103 to 328: score 281.2, E = 1.9e-81
                   *->awlaggtaltglfvtsGLGITaggHdLcsHrsfsknsylndlvGril
                      + + ++++ ++++  s+LGITag+H+L+sHr     sy+++l++r++
     ha02351   103    CKFYTWLWGVFYYFVSALGITAGAHRLWSHR-----SYKARLPLRLF 144  

                   lalplgvpfqgsiieWrrsHrtHHrytntdekDPdiaprgffavswpksh
                   l++ ++++fq++++eW+r+Hr+HH++++t++ DP++++rgff        
     ha02351   145 LIIANTMAFQNDVYEWARDHRAHHKFSETHA-DPHNSRRGFF-------- 185  

                   svhyekkvllfshvgwllvrklplyflliyplrlakgvpGKYdrkkldsh
                             fshvgwllvrk+p         +++kg        +ld++
     ha02351   186 ----------FSHVGWLLVRKHPA--------VKEKG-------STLDLS 210  

                   dlprsplfrfqaaeryyvllsllglfalptllplllwglgglwgvlkfyl
                   dl++  l++fq  +ryy +  ll++f+lptl+p+++wg+++   v+++ +
     ha02351   211 DLEAEKLVMFQ--RRYYKPGLLLMCFILPTLVPWYFWGETFQNSVFVATF 258  

                   vpylvvgfwlglvnsylaHtggerklPppfappeYdgensiewdwdrgql
                   ++y vv+++++lvns +aH +g+r       p            +d+   
     ha02351   259 LRYAVVLNATWLVNS-AAHLFGYR-------P------------YDK--- 285  

                   sttvdrdygkllnllfhgegNyHveHHlFPtiPhynlpkatpaikptl<-
                     +++++++ l++l + geg +H++HH FP +++ + +   ++i+ t+  
     ha02351   286 --NISPRENILVSLGAVGEG-FHNYHHSFP-YDYSASEYR-WHINFTT   328  

                   *
                    
     ha02351     -   -    

PF00487.14.ls: domain 1 of 1, from 103 to 328: score 282.9, E = 5.6e-82
                   *->awlaggtaltglfvtsGLGITaggHdLcsHrsfsknsylndlvGril
                      + + ++++ ++++  s+LGITag+H+L+sHr     sy+++l++r++
     ha02351   103    CKFYTWLWGVFYYFVSALGITAGAHRLWSHR-----SYKARLPLRLF 144  

                   lalplgvpfqgsiieWrrsHrtHHrytntdekDPdiaprgffavswpksh
                   l++ ++++fq++++eW+r+Hr+HH++++t++ DP++++rgff        
     ha02351   145 LIIANTMAFQNDVYEWARDHRAHHKFSETHA-DPHNSRRGFF-------- 185  

                   svhyekkvllfshvgwllvrklplyflliyplrlakgvpGKYdrkkldsh
                             fshvgwllvrk+p         +++kg        +ld++
     ha02351   186 ----------FSHVGWLLVRKHPA--------VKEKG-------STLDLS 210  

                   dlprsplfrfqaaeryyvllsllglfalptllplllwglgglwgvlkfyl
                   dl++  l++fq  +ryy +  ll++f+lptl+p+++wg+++   v+++ +
     ha02351   211 DLEAEKLVMFQ--RRYYKPGLLLMCFILPTLVPWYFWGETFQNSVFVATF 258  

                   vpylvvgfwlglvnsylaHtggerklPppfappeYdgensiewdwdrgql
                   ++y vv+++++lvns +aH +g+r       p            +d+   
     ha02351   259 LRYAVVLNATWLVNS-AAHLFGYR-------P------------YDK--- 285  

                   sttvdrdygkllnllfhgegNyHveHHlFPtiPhynlpkatpaikptl<-
                     +++++++ l++l + geg +H++HH FP +++ + +   ++i+ t+  
     ha02351   286 --NISPRENILVSLGAVGEG-FHNYHHSFP-YDYSASEYR-WHINFTT   328  

                   *
                    
     ha02351     -   -    

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