hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-20212566/chunk_1/iprscan-20080811-20212566.nocrc
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Query sequence: ha02919
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00069.15.ls Protein kinase domain                       241.0    2.4e-69   1
PF00069.15.fs Protein kinase domain                       240.7      3e-69   2
PF07714.7.fs Protein tyrosine kinase                      45.3    4.8e-13   3
PF00433.14.fs Protein kinase C terminal domain             43.3    2.7e-12   1
PF00433.14.ls Protein kinase C terminal domain             45.3    1.9e-10   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00069.15.ls   1/1      99   392 ..     1   287 []   241.0  2.4e-69
PF00069.15.fs   1/2      99   244 ..     1   160 [.   173.1  4.5e-49
PF07714.7.fs   2/3     171   244 ..    81   160 ..    23.9  7.6e-07
PF00069.15.fs   2/2     293   369 ..   173   266 ..    67.5  4.6e-19
PF07714.7.fs   3/3     300   346 ..   184   233 ..    12.6   0.0014
PF00433.14.ls   1/1     410   459 ..     1    47 []    45.3  1.9e-10
PF00433.14.fs   1/1     410   459 ..     1    47 []    43.3  2.7e-12

Alignments of top-scoring domains:
PF00069.15.ls: domain 1 of 1, from 99 to 392: score 241.0, E = 2.4e-69
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      +e l+++G+G+fG+V++ ++k+tg+++A+Ki++k +  +k++  ++r
     ha02919    99    FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIR 145  

                   lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse
                   + E  il + ++  +v+++++f+dk +lyl++E+++gG    d +++l+ 
     ha02919   146 A-ERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGG----DMMTLLM- 189  

                   trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv
                     +k +l  +e+e ++++ +++ +++ +H+ g+iHRD+KP+N+Lld++g+
     ha02919   190 --KKDTL--TEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGH 235  

                   vdaflKiaDFGlAkkls.................................
                   v    K++DFGl+  l++ ++++  ++ +++ +++ + ++ +++++ ++ 
     ha02919   236 V----KLSDFGLCTGLKkahrtefyrnlnhslpsdftfqnmnskrkaetw 281  

                   .t.sss.lttfvGTpwYmAPEvllggngygtkvDvWSlGvilyelltGkp
                   + ++ + + + vGTp+Y+APEv + ++gy + +D+WSlGvi+ye+l G+p
     ha02919   282 kRnRRQlAFSTVGTPDYIAPEVFM-QTGYNKLCDWWSLGVIMYEMLIGYP 330  

                   PFsgevqdsldqlqlirkilgpplefdspewdsisrsefrrlpnlseeak
                   PF++e     ++++ ++k++  +    +p + +is           e ak
     ha02919   331 PFCSE-----TPQETYKKVMNWKETLTFPPEVPIS-----------EKAK 364  

                   dLikkcLnkDPskRlt...aeeilqHPwf<-*
                   dLi + ++   + R++ ++ eei+   +f   
     ha02919   365 DLILRFCCEWEH-RIGapgVEEIKSNSFF    392  

PF00069.15.fs: domain 1 of 2, from 99 to 244: score 173.1, E = 4.5e-49
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                      +e l+++G+G+fG+V++ ++k+tg+++A+Ki++k +  +k++  ++r
     ha02919    99    FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIR 145  

                   lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse
                   + E  il + ++  +v+++++f+dk +lyl++E+++gG    d +++l+ 
     ha02919   146 A-ERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGG----DMMTLLM- 189  

                   trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv
                     +k +l  +e+e ++++ +++ +++ +H+ g+iHRD+KP+N+Lld++g+
     ha02919   190 --KKDTL--TEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGH 235  

                   vdaflKiaDFGlA<-*
                   v    K++DFGl+   
     ha02919   236 V----KLSDFGLC    244  

PF07714.7.fs: domain 2 of 3, from 171 to 244: score 23.9, E = 7.6e-07
                   *->ggpglyiVtEymegGdLldfLrkhregrpLtlkdLlsfalQiAkGMe
                      +   ly+++E+ +gGd+ + L k   ++ Lt ++   + ++   + +
     ha02919   171    N---LYLIMEFLPGGDMMTLLMK---KDTLTEEETQFYIAETVLAID 211  

                   YLesknfvHRDLAARNcLVsenlvVKIsDFGLa<-*
                     ++ +f+HRD+   N L++++++VK sDFGL+   
     ha02919   212 SIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLC    244  

PF00069.15.fs: domain 2 of 2, from 293 to 369: score 67.5, E = 4.6e-19
                   *->vGTpwYmAPEvllggngygtkvDvWSlGvilyelltGkpPFsgevqd
                      vGTp+Y+APEv + ++gy + +D+WSlGvi+ye+l G+pPF++e   
     ha02919   293    VGTPDYIAPEVFM-QTGYNKLCDWWSLGVIMYEMLIGYPPFCSE--- 335  

                   sldqlqlirkilgpplefdspewdsisrsefrrlpnlseeakdLikk<-*
                     ++++ ++k++  +    +p + +is           e akdLi +   
     ha02919   336 --TPQETYKKVMNWKETLTFPPEVPIS-----------EKAKDLILR    369  

PF07714.7.fs: domain 3 of 3, from 300 to 346: score 12.6, E = 0.0014
                   *->APEslkygkFtskSDVWSFGVlLWEiftlGeqPFYpgmsneevlell
                      APE+++   ++   D WS GV ++E++  G +P +   +++e+++++
     ha02919   300    APEVFMQTGYNKLCDWWSLGVIMYEMLI-GYPP-FCSETPQETYKKV 344  

                   yed<-*
                    ++   
     ha02919   345 -MN    346  

PF00433.14.ls: domain 1 of 1, from 410 to 459: score 45.3, E = 1.9e-10
                   *->kvksptDTsNFDpeFTsepptltpp..pdsr.lssgkqleFrGFtYv
                      ++ks++DTsNFD++ +s  ++ t+++++ ++++ ++k++ F+++tY+
     ha02919   410    EIKSIDDTSNFDEFPESDILKPTVAtsNHPEtDYKNKDWVFINYTYK 456  

                   npe<-*
                   ++e   
     ha02919   457 RFE    459  

PF00433.14.fs: domain 1 of 1, from 410 to 459: score 43.3, E = 2.7e-12
                   *->kvksptDTsNFDpeFTsepptltpp..pdsr.lssgkqleFrGFtYv
                      ++ks++DTsNFD++ +s  ++ t+++++ ++++ ++k++ F+++tY+
     ha02919   410    EIKSIDDTSNFDEFPESDILKPTVAtsNHPEtDYKNKDWVFINYTYK 456  

                   npe<-*
                   ++e   
     ha02919   457 RFE    459  

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