hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-20264648/chunk_1/iprscan-20080811-20264648.nocrc
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Query sequence: ha02933
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00063                                                 254.2      1e-71   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00063    1/1     230   347 ..     1   130 []   254.2    1e-71

Alignments of top-scoring domains:
SM00063: domain 1 of 1, from 230 to 347: score 254.2, E = 1e-71
                   *->rClpePitiplCkdlgLPYNlTsmPNLlgHttQeEAgleYIleqFkP
                       C  +Pi+iplC d++  YN+T+mPNLlgHt+Qe+Agle  ++qF+P
     ha02933   230    YC--QPISIPLCTDIA--YNQTIMPNLLGHTNQEDAGLE--VHQFYP 270  

                   LlnvqkCspdlrfFLCsvYaPvCtedlpdepipPCRslCEavregCeplm
                   L++vq Cs++l+fFLCs+YaPvCt+++  +++pPCRslCE++r+gCe lm
     ha02933   271 LVKVQ-CSAELKFFLCSMYAPVCTVLE--QALPPCRSLCERARQGCEALM 317  

                   ekfGfaWPefLrCtedrFPvqndreelCmepnp<-*
                   +kfGf+WP++L+C  ++FPv+++  elC+++n    
     ha02933   318 NKFGFQWPDTLKC--EKFPVHGA-GELCVGQNT    347  

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