# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oha04660.fasta.nr -Q ha04660.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ha04660, 1468 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6831819 sequences Expectation_n fit: rho(ln(x))= 6.8825+/-0.000204; mu= 8.1482+/- 0.011 mean_var=130.6815+/-25.072, 0's: 37 Z-trim: 82 B-trim: 0 in 0/65 Lambda= 0.112193 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 40, opt: 28, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|168275642|dbj|BAG10541.1| nuclear receptor coac (1464) 9848 1606.4 0 gi|13626594|sp|Q15596|NCOA2_HUMAN Nuclear receptor (1464) 9845 1605.9 0 gi|109730401|gb|AAI14384.1| Nuclear receptor coact (1464) 9840 1605.1 0 gi|109086650|ref|XP_001082161.1| PREDICTED: nuclea (1464) 9773 1594.3 0 gi|73999477|ref|XP_544118.2| PREDICTED: similar to (1465) 9619 1569.4 0 gi|149721334|ref|XP_001493287.1| PREDICTED: simila (1464) 9525 1554.2 0 gi|164523394|gb|ABY60787.1| transcriptional interm (1463) 9471 1545.4 0 gi|194672789|ref|XP_584905.4| PREDICTED: similar t (1465) 9376 1530.0 0 gi|118026940|ref|NP_032704.2| nuclear receptor coa (1462) 9357 1527.0 0 gi|13626601|sp|Q61026|NCOA2_MOUSE Nuclear receptor (1462) 9341 1524.4 0 gi|13124334|sp|Q9WUI9.1|NCOA2_RAT Nuclear receptor (1465) 9271 1513.0 0 gi|126321286|ref|XP_001378653.1| PREDICTED: simila (1461) 9206 1502.5 0 gi|148682372|gb|EDL14319.1| nuclear receptor coact (1456) 8768 1431.6 0 gi|118087056|ref|XP_001231617.1| PREDICTED: nuclea (1463) 8694 1419.6 0 gi|118087054|ref|XP_001231578.1| PREDICTED: nuclea (1463) 8689 1418.8 0 gi|2213817|gb|AAB61575.1| nuclear receptor coactiv (1463) 8622 1408.0 0 gi|149060921|gb|EDM11531.1| nuclear receptor coact (1348) 8538 1394.4 0 gi|13124365|sp|Q9W705|NCOA2_XENLA Nuclear receptor (1516) 6107 1000.9 0 gi|164523396|gb|ABY60788.1| transcriptional interm (1394) 5637 924.8 0 gi|118026944|ref|NP_001071163.1| nuclear receptor (1393) 5542 909.4 0 gi|31418367|gb|AAH53387.1| Ncoa2 protein [Mus musc (1393) 5538 908.8 0 gi|151175624|dbj|BAF69036.1| glucocorticoid recept (1393) 5536 908.5 0 gi|26352490|dbj|BAC39875.1| unnamed protein produc ( 873) 5497 902.0 0 gi|190337440|gb|AAI63724.1| Transcriptional interm (1505) 3867 638.4 1e-179 gi|13022010|gb|AAK11608.1|AF323989_1 transcription (1505) 3865 638.0 1.3e-179 gi|194391224|dbj|BAG60730.1| unnamed protein produ ( 552) 3590 593.2 1.5e-166 gi|26330874|dbj|BAC29167.1| unnamed protein produc ( 592) 3239 536.4 2e-149 gi|149415177|ref|XP_001518562.1| PREDICTED: simila ( 655) 3076 510.0 1.9e-141 gi|119905976|ref|XP_602010.3| PREDICTED: similar t (1411) 2792 464.3 2.4e-127 gi|73992554|ref|XP_543039.2| PREDICTED: similar to (1416) 2786 463.4 4.6e-127 gi|112818455|gb|AAI22548.1| Nuclear receptor coact (1419) 2746 456.9 4.1e-125 gi|2318006|gb|AAC51663.1| receptor-associated coac (1417) 2739 455.8 9.1e-125 gi|194224502|ref|XP_001916932.1| PREDICTED: simila (1404) 2636 439.1 9.4e-120 gi|2707770|gb|AAB92368.1| nuclear receptor coactiv (1412) 2569 428.2 1.7e-116 gi|4584218|emb|CAB40662.1| nuclear receptor coacti (1415) 2566 427.8 2.4e-116 gi|62089312|dbj|BAD93100.1| nuclear receptor coact (1427) 2549 425.0 1.6e-115 gi|168277986|dbj|BAG10971.1| nuclear receptor coac (1423) 2531 422.1 1.2e-114 gi|2331250|gb|AAC51677.1| Amplified in Breast Canc (1420) 2524 421.0 2.7e-114 gi|109091682|ref|XP_001101374.1| PREDICTED: nuclea (1425) 2519 420.1 4.8e-114 gi|149639797|ref|XP_001506517.1| PREDICTED: simila (1655) 2519 420.2 5.4e-114 gi|23396777|sp|Q9Y6Q9.1|NCOA3_HUMAN Nuclear recept (1424) 2517 419.8 6e-114 gi|109091672|ref|XP_001101282.1| PREDICTED: nuclea (1425) 2517 419.8 6e-114 gi|62204211|gb|AAH92516.1| Nuclear receptor coacti (1422) 2515 419.5 7.5e-114 gi|158260389|dbj|BAF82372.1| unnamed protein produ (1424) 2515 419.5 7.5e-114 gi|109091678|ref|XP_001101475.1| PREDICTED: nuclea (1426) 2509 418.5 1.5e-113 gi|109091680|ref|XP_001101195.1| PREDICTED: nuclea (1426) 2507 418.2 1.8e-113 gi|109091674|ref|XP_001101561.1| PREDICTED: nuclea (1422) 2505 417.9 2.3e-113 gi|109091676|ref|XP_001101110.1| PREDICTED: nuclea (1417) 2393 399.8 6.5e-108 gi|118100627|ref|XP_417385.2| PREDICTED: similar t (1399) 2389 399.1 1e-107 gi|60099155|emb|CAH65408.1| hypothetical protein [ ( 395) 2373 396.1 2.3e-107 >>gi|168275642|dbj|BAG10541.1| nuclear receptor coactiva (1464 aa) initn: 9848 init1: 9848 opt: 9848 Z-score: 8613.7 bits: 1606.4 E(): 0 Smith-Waterman score: 9848; 100.000% identity (100.000% similar) in 1464 aa overlap (5-1468:1-1464) 10 20 30 40 50 60 ha0466 YVFKMSGMGENTSDPSRAETRKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELIFAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 MSGMGENTSDPSRAETRKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELIFAN 10 20 30 40 50 70 80 90 100 110 120 ha0466 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG 60 70 80 90 100 110 130 140 150 160 170 180 ha0466 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL 120 130 140 150 160 170 190 200 210 220 230 240 ha0466 PKSIVNGGSWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PKSIVNGGSWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPK 180 190 200 210 220 230 250 260 270 280 290 300 ha0466 SIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 SIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW 240 250 260 270 280 290 310 320 330 340 350 360 ha0466 EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI 300 310 320 330 340 350 370 380 390 400 410 420 ha0466 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQTMGKPLNPISSNSPAHQALCSGNPGQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQTMGKPLNPISSNSPAHQALCSGNPGQD 360 370 380 390 400 410 430 440 450 460 470 480 ha0466 MTLSSNINFPINGPKEQMGMPIGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 MTLSSNINFPINGPKEQMGMPIGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPG 420 430 440 450 460 470 490 500 510 520 530 540 ha0466 MNPGQPTSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 MNPGQPTSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA 480 490 500 510 520 530 550 560 570 580 590 600 ha0466 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT 540 550 560 570 580 590 610 620 630 640 650 660 ha0466 TGQAESSCHPGEQKETNDPNLPPAVSSERADGQSRLHDSKGQTKLLQLLTTKSDQMEPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 TGQAESSCHPGEQKETNDPNLPPAVSSERADGQSRLHDSKGQTKLLQLLTTKSDQMEPSP 600 610 620 630 640 650 670 680 690 700 710 720 ha0466 LASSLSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LASSLSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKDLS 660 670 680 690 700 710 730 740 750 760 770 780 ha0466 QESSSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 QESSSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA 720 730 740 750 760 770 790 800 810 820 830 840 ha0466 SNTKLIAMKTEKEEMSFEPGDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 SNTKLIAMKTEKEEMSFEPGDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK 780 790 800 810 820 830 850 860 870 880 890 900 ha0466 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP 840 850 860 870 880 890 910 920 930 940 950 960 ha0466 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGNSASRPTMPSGEWAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGNSASRPTMPSGEWAP 900 910 920 930 940 950 970 980 990 1000 1010 1020 ha0466 QSSAVRVTCAATTSAMNRPVQGGMIRNPAASIPMRPSSQPGQRQTLQSQVMNIGPSELEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 QSSAVRVTCAATTSAMNRPVQGGMIRNPAASIPMRPSSQPGQRQTLQSQVMNIGPSELEM 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 ha0466 NMGGPQYSQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 NMGGPQYSQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDE 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 ha0466 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNIMLEQKAPVFPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNIMLEQKAPVFPQQ 1080 1090 1100 1110 1120 1130 1150 1160 1170 1180 1190 1200 ha0466 YASQAQMAQGSYSPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 YASQAQMAQGSYSPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQHR 1140 1150 1160 1170 1180 1190 1210 1220 1230 1240 1250 1260 ha0466 LQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 LQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQ 1200 1210 1220 1230 1240 1250 1270 1280 1290 1300 1310 1320 ha0466 QVQQRTLMMRGQGLNMTPSMVAPSGMPATMSNPRIPQANAQQFPFPPNYGISQQPDPGFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 QVQQRTLMMRGQGLNMTPSMVAPSGMPATMSNPRIPQANAQQFPFPPNYGISQQPDPGFT 1260 1270 1280 1290 1300 1310 1330 1340 1350 1360 1370 1380 ha0466 GATTPQSPLMSPRMAHTQSPMMQQSQANPAYQAPSDINGWAQGNMGGNSMFSQQSPPHFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 GATTPQSPLMSPRMAHTQSPMMQQSQANPAYQAPSDINGWAQGNMGGNSMFSQQSPPHFG 1320 1330 1340 1350 1360 1370 1390 1400 1410 1420 1430 1440 ha0466 QQANTSMYSNNMNINVSMATNTGGMSSMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 QQANTSMYSNNMNINVSMATNTGGMSSMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDPA 1380 1390 1400 1410 1420 1430 1450 1460 ha0466 LRGGNLFPNQLPGMDMIKQEGDTTRKYC :::::::::::::::::::::::::::: gi|168 LRGGNLFPNQLPGMDMIKQEGDTTRKYC 1440 1450 1460 >>gi|13626594|sp|Q15596|NCOA2_HUMAN Nuclear receptor coa (1464 aa) initn: 9845 init1: 9845 opt: 9845 Z-score: 8611.1 bits: 1605.9 E(): 0 Smith-Waterman score: 9845; 99.932% identity (100.000% similar) in 1464 aa overlap (5-1468:1-1464) 10 20 30 40 50 60 ha0466 YVFKMSGMGENTSDPSRAETRKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELIFAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 MSGMGENTSDPSRAETRKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELIFAN 10 20 30 40 50 70 80 90 100 110 120 ha0466 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG 60 70 80 90 100 110 130 140 150 160 170 180 ha0466 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL 120 130 140 150 160 170 190 200 210 220 230 240 ha0466 PKSIVNGGSWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 PKSIVNGGSWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPK 180 190 200 210 220 230 250 260 270 280 290 300 ha0466 SIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 SIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW 240 250 260 270 280 290 310 320 330 340 350 360 ha0466 EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI 300 310 320 330 340 350 370 380 390 400 410 420 ha0466 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQTMGKPLNPISSNSPAHQALCSGNPGQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQTMGKPLNPISSNSPAHQALCSGNPGQD 360 370 380 390 400 410 430 440 450 460 470 480 ha0466 MTLSSNINFPINGPKEQMGMPIGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPG :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|136 MTLSSNINFPINGPKEQMGMPMGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPG 420 430 440 450 460 470 490 500 510 520 530 540 ha0466 MNPGQPTSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 MNPGQPTSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA 480 490 500 510 520 530 550 560 570 580 590 600 ha0466 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT 540 550 560 570 580 590 610 620 630 640 650 660 ha0466 TGQAESSCHPGEQKETNDPNLPPAVSSERADGQSRLHDSKGQTKLLQLLTTKSDQMEPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 TGQAESSCHPGEQKETNDPNLPPAVSSERADGQSRLHDSKGQTKLLQLLTTKSDQMEPSP 600 610 620 630 640 650 670 680 690 700 710 720 ha0466 LASSLSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 LASSLSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKDLS 660 670 680 690 700 710 730 740 750 760 770 780 ha0466 QESSSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 QESSSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA 720 730 740 750 760 770 790 800 810 820 830 840 ha0466 SNTKLIAMKTEKEEMSFEPGDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 SNTKLIAMKTEKEEMSFEPGDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK 780 790 800 810 820 830 850 860 870 880 890 900 ha0466 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP 840 850 860 870 880 890 910 920 930 940 950 960 ha0466 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGNSASRPTMPSGEWAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGNSASRPTMPSGEWAP 900 910 920 930 940 950 970 980 990 1000 1010 1020 ha0466 QSSAVRVTCAATTSAMNRPVQGGMIRNPAASIPMRPSSQPGQRQTLQSQVMNIGPSELEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 QSSAVRVTCAATTSAMNRPVQGGMIRNPAASIPMRPSSQPGQRQTLQSQVMNIGPSELEM 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 ha0466 NMGGPQYSQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 NMGGPQYSQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDE 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 ha0466 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNIMLEQKAPVFPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNIMLEQKAPVFPQQ 1080 1090 1100 1110 1120 1130 1150 1160 1170 1180 1190 1200 ha0466 YASQAQMAQGSYSPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 YASQAQMAQGSYSPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQHR 1140 1150 1160 1170 1180 1190 1210 1220 1230 1240 1250 1260 ha0466 LQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 LQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQ 1200 1210 1220 1230 1240 1250 1270 1280 1290 1300 1310 1320 ha0466 QVQQRTLMMRGQGLNMTPSMVAPSGMPATMSNPRIPQANAQQFPFPPNYGISQQPDPGFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 QVQQRTLMMRGQGLNMTPSMVAPSGMPATMSNPRIPQANAQQFPFPPNYGISQQPDPGFT 1260 1270 1280 1290 1300 1310 1330 1340 1350 1360 1370 1380 ha0466 GATTPQSPLMSPRMAHTQSPMMQQSQANPAYQAPSDINGWAQGNMGGNSMFSQQSPPHFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 GATTPQSPLMSPRMAHTQSPMMQQSQANPAYQAPSDINGWAQGNMGGNSMFSQQSPPHFG 1320 1330 1340 1350 1360 1370 1390 1400 1410 1420 1430 1440 ha0466 QQANTSMYSNNMNINVSMATNTGGMSSMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 QQANTSMYSNNMNINVSMATNTGGMSSMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDPA 1380 1390 1400 1410 1420 1430 1450 1460 ha0466 LRGGNLFPNQLPGMDMIKQEGDTTRKYC :::::::::::::::::::::::::::: gi|136 LRGGNLFPNQLPGMDMIKQEGDTTRKYC 1440 1450 1460 >>gi|109730401|gb|AAI14384.1| Nuclear receptor coactivat (1464 aa) initn: 9840 init1: 9840 opt: 9840 Z-score: 8606.7 bits: 1605.1 E(): 0 Smith-Waterman score: 9840; 99.863% identity (100.000% similar) in 1464 aa overlap (5-1468:1-1464) 10 20 30 40 50 60 ha0466 YVFKMSGMGENTSDPSRAETRKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELIFAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MSGMGENTSDPSRAETRKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELIFAN 10 20 30 40 50 70 80 90 100 110 120 ha0466 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG 60 70 80 90 100 110 130 140 150 160 170 180 ha0466 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL 120 130 140 150 160 170 190 200 210 220 230 240 ha0466 PKSIVNGGSWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PKSIVNGGSWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPK 180 190 200 210 220 230 250 260 270 280 290 300 ha0466 SIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW 240 250 260 270 280 290 310 320 330 340 350 360 ha0466 EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI 300 310 320 330 340 350 370 380 390 400 410 420 ha0466 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQTMGKPLNPISSNSPAHQALCSGNPGQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQTMGKPLNPISSNSPAHQALCSGNPGQD 360 370 380 390 400 410 430 440 450 460 470 480 ha0466 MTLSSNINFPINGPKEQMGMPIGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPG :::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|109 MTLSSNINFPINGPKEQMGMPMGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPG 420 430 440 450 460 470 490 500 510 520 530 540 ha0466 MNPGQPTSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MNPGQPTSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA 480 490 500 510 520 530 550 560 570 580 590 600 ha0466 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT 540 550 560 570 580 590 610 620 630 640 650 660 ha0466 TGQAESSCHPGEQKETNDPNLPPAVSSERADGQSRLHDSKGQTKLLQLLTTKSDQMEPSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TGQAESSCHPGEQKETNDPNLPPAVSSERADGQSRLHDSKGQTKLLQLLTTKSDQMEPSP 600 610 620 630 640 650 670 680 690 700 710 720 ha0466 LASSLSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LASSLSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKDLS 660 670 680 690 700 710 730 740 750 760 770 780 ha0466 QESSSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QESSSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA 720 730 740 750 760 770 790 800 810 820 830 840 ha0466 SNTKLIAMKTEKEEMSFEPGDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SNTKLIAMKTEKEEMSFEPGDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK 780 790 800 810 820 830 850 860 870 880 890 900 ha0466 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP 840 850 860 870 880 890 910 920 930 940 950 960 ha0466 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGNSASRPTMPSGEWAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGNSASRPTMPSGEWAP 900 910 920 930 940 950 970 980 990 1000 1010 1020 ha0466 QSSAVRVTCAATTSAMNRPVQGGMIRNPAASIPMRPSSQPGQRQTLQSQVMNIGPSELEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QSSAVRVTCAATTSAMNRPVQGGMIRNPAASIPMRPSSQPGQRQTLQSQVMNIGPSELEM 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 ha0466 NMGGPQYSQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NMGGPQYSQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDE 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 ha0466 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNIMLEQKAPVFPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNIMLEQKAPVFPQQ 1080 1090 1100 1110 1120 1130 1150 1160 1170 1180 1190 1200 ha0466 YASQAQMAQGSYSPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 YASQAQMAQGSYSPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQHR 1140 1150 1160 1170 1180 1190 1210 1220 1230 1240 1250 1260 ha0466 LQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQ 1200 1210 1220 1230 1240 1250 1270 1280 1290 1300 1310 1320 ha0466 QVQQRTLMMRGQGLNMTPSMVAPSGMPATMSNPRIPQANAQQFPFPPNYGISQQPDPGFT :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|109 QVQQRTLMMRGQGLNMTPSMVAPSGIPATMSNPRIPQANAQQFPFPPNYGISQQPDPGFT 1260 1270 1280 1290 1300 1310 1330 1340 1350 1360 1370 1380 ha0466 GATTPQSPLMSPRMAHTQSPMMQQSQANPAYQAPSDINGWAQGNMGGNSMFSQQSPPHFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GATTPQSPLMSPRMAHTQSPMMQQSQANPAYQAPSDINGWAQGNMGGNSMFSQQSPPHFG 1320 1330 1340 1350 1360 1370 1390 1400 1410 1420 1430 1440 ha0466 QQANTSMYSNNMNINVSMATNTGGMSSMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QQANTSMYSNNMNINVSMATNTGGMSSMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDPA 1380 1390 1400 1410 1420 1430 1450 1460 ha0466 LRGGNLFPNQLPGMDMIKQEGDTTRKYC :::::::::::::::::::::::::::: gi|109 LRGGNLFPNQLPGMDMIKQEGDTTRKYC 1440 1450 1460 >>gi|109086650|ref|XP_001082161.1| PREDICTED: nuclear re (1464 aa) initn: 9773 init1: 9773 opt: 9773 Z-score: 8548.1 bits: 1594.3 E(): 0 Smith-Waterman score: 9773; 99.044% identity (99.863% similar) in 1464 aa overlap (5-1468:1-1464) 10 20 30 40 50 60 ha0466 YVFKMSGMGENTSDPSRAETRKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELIFAN :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MSGMGENTSDPSRAETRKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELIFAN 10 20 30 40 50 70 80 90 100 110 120 ha0466 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG 60 70 80 90 100 110 130 140 150 160 170 180 ha0466 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL 120 130 140 150 160 170 190 200 210 220 230 240 ha0466 PKSIVNGGSWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PKSIVNGGSWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPK 180 190 200 210 220 230 250 260 270 280 290 300 ha0466 SIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW 240 250 260 270 280 290 310 320 330 340 350 360 ha0466 EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|109 EDLVRRCIQKFHAQHEGESLSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI 300 310 320 330 340 350 370 380 390 400 410 420 ha0466 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQTMGKPLNPISSNSPAHQALCSGNPGQD ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|109 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQTMGKPLNPISSSSPAHQALCSGNPGQD 360 370 380 390 400 410 430 440 450 460 470 480 ha0466 MTLSSNINFPINGPKEQMGMPIGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPG :::::::::::::::::::::.:::::::::::::::: ::::::::::::::::::::: gi|109 MTLSSNINFPINGPKEQMGMPMGRFGGSGGMNHVSGMQPTTPQGSNYALKMNSPSQSSPG 420 430 440 450 460 470 490 500 510 520 530 540 ha0466 MNPGQPTSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MNPGQPTSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA 480 490 500 510 520 530 550 560 570 580 590 600 ha0466 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT 540 550 560 570 580 590 610 620 630 640 650 660 ha0466 TGQAESSCHPGEQKETNDPNLPPAVSSERADGQSRLHDSKGQTKLLQLLTTKSDQMEPSP :::::::::::::::::::::::.::.::::::::::::::::::::::::::::::::: gi|109 TGQAESSCHPGEQKETNDPNLPPTVSGERADGQSRLHDSKGQTKLLQLLTTKSDQMEPSP 600 610 620 630 640 650 670 680 690 700 710 720 ha0466 LASSLSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LASSLSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKDLS 660 670 680 690 700 710 730 740 750 760 770 780 ha0466 QESSSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|109 QESSSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDSA 720 730 740 750 760 770 790 800 810 820 830 840 ha0466 SNTKLIAMKTEKEEMSFEPGDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SNTKLIAMKTEKEEMSFEPGDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK 780 790 800 810 820 830 850 860 870 880 890 900 ha0466 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP 840 850 860 870 880 890 910 920 930 940 950 960 ha0466 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGNSASRPTMPSGEWAP ::::::::::::::::::::::::::::::::::::::.::::::.:::::::::::::: gi|109 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQGNLGNNSTGMIGSSASRPTMPSGEWAP 900 910 920 930 940 950 970 980 990 1000 1010 1020 ha0466 QSSAVRVTCAATTSAMNRPVQGGMIRNPAASIPMRPSSQPGQRQTLQSQVMNIGPSELEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QSSAVRVTCAATTSAMNRPVQGGMIRNPAASIPMRPSSQPGQRQTLQSQVMNIGPSELEM 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 ha0466 NMGGPQYSQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 NMGGPQYSQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDE 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 ha0466 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNIMLEQKAPVFPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNIMLEQKAPVFPQQ 1080 1090 1100 1110 1120 1130 1150 1160 1170 1180 1190 1200 ha0466 YASQAQMAQGSYSPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 YASQAQMAQGSYSPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQHR 1140 1150 1160 1170 1180 1190 1210 1220 1230 1240 1250 1260 ha0466 LQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 LQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQ 1200 1210 1220 1230 1240 1250 1270 1280 1290 1300 1310 1320 ha0466 QVQQRTLMMRGQGLNMTPSMVAPSGMPATMSNPRIPQANAQQFPFPPNYGISQQPDPGFT :::::::::::::::.:::::::::::::::::::::::::::::::::::::::::::: gi|109 QVQQRTLMMRGQGLNITPSMVAPSGMPATMSNPRIPQANAQQFPFPPNYGISQQPDPGFT 1260 1270 1280 1290 1300 1310 1330 1340 1350 1360 1370 1380 ha0466 GATTPQSPLMSPRMAHTQSPMMQQSQANPAYQAPSDINGWAQGNMGGNSMFSQQSPPHFG ::::::::::::::::::::::::::::::::::::.::::::.:::::::::::::::: gi|109 GATTPQSPLMSPRMAHTQSPMMQQSQANPAYQAPSDMNGWAQGSMGGNSMFSQQSPPHFG 1320 1330 1340 1350 1360 1370 1390 1400 1410 1420 1430 1440 ha0466 QQANTSMYSNNMNINVSMATNTGGMSSMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDPA ::::::::::::::.::::::.:::::::::::::::::::::::::::::::::::::: gi|109 QQANTSMYSNNMNISVSMATNAGGMSSMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDPA 1380 1390 1400 1410 1420 1430 1450 1460 ha0466 LRGGNLFPNQLPGMDMIKQEGDTTRKYC :::::::::::::::::::::::::::: gi|109 LRGGNLFPNQLPGMDMIKQEGDTTRKYC 1440 1450 1460 >>gi|73999477|ref|XP_544118.2| PREDICTED: similar to Nuc (1465 aa) initn: 6384 init1: 6337 opt: 9619 Z-score: 8413.4 bits: 1569.4 E(): 0 Smith-Waterman score: 9619; 97.133% identity (99.454% similar) in 1465 aa overlap (5-1468:1-1465) 10 20 30 40 50 60 ha0466 YVFKMSGMGENTSDPSRAETRKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELIFAN ::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|739 MSGMGENTSDPSRAETRKRKECPDQLGPSPKRSTEKRNREQENKYIEELAELIFAN 10 20 30 40 50 70 80 90 100 110 120 ha0466 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG 60 70 80 90 100 110 130 140 150 160 170 180 ha0466 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|739 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYGILHVGDHTEFVKNLL 120 130 140 150 160 170 190 200 210 220 230 240 ha0466 PKSIVNGGSWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PKSIVNGGSWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPK 180 190 200 210 220 230 250 260 270 280 290 300 ha0466 SIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW 240 250 260 270 280 290 310 320 330 340 350 360 ha0466 EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI 300 310 320 330 340 350 370 380 390 400 410 420 ha0466 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQTMGKPLNPISSNSPAHQALCSGNPGQD :::::::::::::::::::::::::::::::::.::::::::::.::::::.:::::::: gi|739 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQAMGKPLNPISSSSPAHQAMCSGNPGQD 360 370 380 390 400 410 430 440 450 460 470 480 ha0466 MTLSSNINFPINGPKEQMGMPIGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPG :::::::::::::::::::::.:::::::::::::.:::::::::::::::::::::::: gi|739 MTLSSNINFPINGPKEQMGMPMGRFGGSGGMNHVSSMQATTPQGSNYALKMNSPSQSSPG 420 430 440 450 460 470 490 500 510 520 530 540 ha0466 MNPGQPTSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 MNPGQPNSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA 480 490 500 510 520 530 550 560 570 580 590 600 ha0466 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT 540 550 560 570 580 590 610 620 630 640 650 660 ha0466 TGQAESSCHPGEQKETNDPNLPPAVSSERADGQSRLHDSKGQTKLLQLLTTKSDQMEPSP :: ::::::::::::::: :.::::::::::::.:::::::::::::::::::::::::: gi|739 TGPAESSCHPGEQKETNDSNMPPAVSSERADGQNRLHDSKGQTKLLQLLTTKSDQMEPSP 600 610 620 630 640 650 670 680 690 700 710 720 ha0466 LASSLSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKDLS :.:::::.:::::..::::::::::::::::::::::::::::::::::::::::::.:: gi|739 LSSSLSDANKDSTAGLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKELS 660 670 680 690 700 710 730 740 750 760 770 780 ha0466 QESSSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QEASSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA 720 730 740 750 760 770 790 800 810 820 830 840 ha0466 SNTKLIAMKTEKEEMSFEPGDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|739 SNTKLIAMKTEKEEMSFEPSDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK 780 790 800 810 820 830 850 860 870 880 890 900 ha0466 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP 840 850 860 870 880 890 910 920 930 940 950 960 ha0466 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGNSASRPTMPSGEWAP :::::::::::.:::::::::::::::::::::::::::::::::..::::::::::::: gi|739 TGAGPFPPIRNNSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGSNASRPTMPSGEWAP 900 910 920 930 940 950 970 980 990 1000 1010 ha0466 QSSAVRVTCAA-TTSAMNRPVQGGMIRNPAASIPMRPSSQPGQRQTLQSQVMNIGPSELE ::::::::::: ::::::::.::::::::.:::::::.::::::: :::::::::::::: gi|739 QSSAVRVTCAAATTSAMNRPIQGGMIRNPTASIPMRPNSQPGQRQMLQSQVMNIGPSELE 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 ha0466 MNMGGPQYSQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSD ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|739 MNMGGPQYSQQQAPPNQTAPWPESILPIDQASFANQNRQPFGSSPDDLLCPHPAAESPSD 1020 1030 1040 1050 1060 1070 1080 1090 1100 1110 1120 1130 ha0466 EGALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNIMLEQKAPVFPQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|739 EGALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNIMLEQKAAVFPQ 1080 1090 1100 1110 1120 1130 1140 1150 1160 1170 1180 1190 ha0466 QYASQAQMAQGSYSPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQH ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|739 QYASQAQMAQGSYPPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQH 1140 1150 1160 1170 1180 1190 1200 1210 1220 1230 1240 1250 ha0466 RLQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RLQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQ 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 ha0466 QQVQQRTLMMRGQGLNMTPSMVAPSGMPATMSNPRIPQANAQQFPFPPNYGISQQPDPGF :::::::::::::::::: :::::.:.:::.::::.:::::::::::::::::::::::: gi|739 QQVQQRTLMMRGQGLNMTSSMVAPGGLPATLSNPRMPQANAQQFPFPPNYGISQQPDPGF 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 ha0466 TGATTPQSPLMSPRMAHTQSPMMQQSQANPAYQAPSDINGWAQGNMGGNSMFSQQSPPHF :::::::::::::::::::::::::::::::::: ::.:::::::::::::::::::::: gi|739 TGATTPQSPLMSPRMAHTQSPMMQQSQANPAYQASSDMNGWAQGNMGGNSMFSQQSPPHF 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 ha0466 GQQANTSMYSNNMNINVSMATNTGGMSSMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDP :::::::::.::::::::::::::::..:::::::::::::::::::::::::::::::: gi|739 GQQANTSMYNNNMNINVSMATNTGGMNNMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDP 1380 1390 1400 1410 1420 1430 1440 1450 1460 ha0466 ALRGGNLFPNQLPGMDMIKQEGDTTRKYC :::::::::::::::::::::::..:::: gi|739 ALRGGNLFPNQLPGMDMIKQEGDASRKYC 1440 1450 1460 >>gi|149721334|ref|XP_001493287.1| PREDICTED: similar to (1464 aa) initn: 9525 init1: 9525 opt: 9525 Z-score: 8331.2 bits: 1554.2 E(): 0 Smith-Waterman score: 9525; 95.970% identity (99.317% similar) in 1464 aa overlap (5-1468:1-1464) 10 20 30 40 50 60 ha0466 YVFKMSGMGENTSDPSRAETRKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELIFAN ::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|149 MSGMGENTSDPSRAETRKRKECPDQLGPSPKRSTEKRNREQENKYIEELAELIFAN 10 20 30 40 50 70 80 90 100 110 120 ha0466 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG 60 70 80 90 100 110 130 140 150 160 170 180 ha0466 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL ::::::::::::::::::::::::::::::::::::::::::::::::::::.::::::: gi|149 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHNEFVKNLL 120 130 140 150 160 170 190 200 210 220 230 240 ha0466 PKSIVNGGSWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPK ::::::::::.::::::::::::::::::::::::::::::::::::::.:::::::::: gi|149 PKSIVNGGSWAGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYEAMQCFAVSQPK 180 190 200 210 220 230 250 260 270 280 290 300 ha0466 SIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW :::::::::::::::::::::::::::: :::::::::::::::::::::.::::::::: gi|149 SIKEEGEDLQSCLICVARRVPMKERPVLTSSESFTTRQDLQGKITSLDTSSMRAAMKPGW 240 250 260 270 280 290 310 320 330 340 350 360 ha0466 EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI :::::::::::::::::::::.::::::::::::::.::::::::::::.:.:::::::: gi|149 EDLVRRCIQKFHAQHEGESVSHAKRHHHEVLRQGLAISQIYRFSLSDGTVVSAQTKSKLI 300 310 320 330 340 350 370 380 390 400 410 420 ha0466 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQTMGKPLNPISSNSPAHQALCSGNPGQD :::::::::::::::::::::::::::::::::.::::::::::.::::: .:::::::: gi|149 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQAMGKPLNPISSSSPAHQPMCSGNPGQD 360 370 380 390 400 410 430 440 450 460 470 480 ha0466 MTLSSNINFPINGPKEQMGMPIGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPG :::.:::::::::::::::::.:::::::::::::.:::.:::::::::::::::::::: gi|149 MTLGSNINFPINGPKEQMGMPLGRFGGSGGMNHVSSMQAATPQGSNYALKMNSPSQSSPG 420 430 440 450 460 470 490 500 510 520 530 540 ha0466 MNPGQPTSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA ::::::.::::::::::::::::::.:::::::::::::::::::::::::::::::::: gi|149 MNPGQPNSMLSPRHRMSPGVAGSPRVPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA 480 490 500 510 520 530 550 560 570 580 590 600 ha0466 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT 540 550 560 570 580 590 610 620 630 640 650 660 ha0466 TGQAESSCHPGEQKETNDPNLPPAVSSERADGQSRLHDSKGQTKLLQLLTTKSDQMEPSP ::::::::::::::::.: .:: : :.::::: .:::::::::::::::::::::::::: gi|149 TGQAESSCHPGEQKETSDSSLPQAGSGERADGPNRLHDSKGQTKLLQLLTTKSDQMEPSP 600 610 620 630 640 650 670 680 690 700 710 720 ha0466 LASSLSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKDLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::.:: gi|149 LASSLSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKELS 660 670 680 690 700 710 730 740 750 760 770 780 ha0466 QESSSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA :...:::::::::::::::::::::::::::::::::::::::::::::::::::::: : gi|149 QDTNSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDAA 720 730 740 750 760 770 790 800 810 820 830 840 ha0466 SNTKLIAMKTEKEEMSFEPGDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|149 SNTKLIAMKTEKEEMSFEPSDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK 780 790 800 810 820 830 850 860 870 880 890 900 ha0466 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP 840 850 860 870 880 890 910 920 930 940 950 960 ha0466 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGNSASRPTMPSGEWAP :::::::::::::::::::::::::::::::::::::::::::::....::::::::::: gi|149 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGSNSARPTMPSGEWAP 900 910 920 930 940 950 970 980 990 1000 1010 1020 ha0466 QSSAVRVTCAATTSAMNRPVQGGMIRNPAASIPMRPSSQPGQRQTLQSQVMNIGPSELEM :::::::::::::::::::.::::::::.:::::::.::::::: ::::::::::::::: gi|149 QSSAVRVTCAATTSAMNRPIQGGMIRNPTASIPMRPNSQPGQRQMLQSQVMNIGPSELEM 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 ha0466 NMGGPQYSQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDE :::::::::::::::::::::.::::::::::::::::::.::::::::::::::::::: gi|149 NMGGPQYSQQQAPPNQTAPWPDSILPIDQASFASQNRQPFASSPDDLLCPHPAAESPSDE 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 ha0466 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNIMLEQKAPVFPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNIMLEQKAPVFPQQ 1080 1090 1100 1110 1120 1130 1150 1160 1170 1180 1190 1200 ha0466 YASQAQMAQGSYSPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQHR ::::::::::.:.::::::::.:::::::::::::::::::::::::::::::::::::: gi|149 YASQAQMAQGGYTPMQDPNFHAMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQHR 1140 1150 1160 1170 1180 1190 1210 1220 1230 1240 1250 1260 ha0466 LQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|149 LQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRHMHQQQ 1200 1210 1220 1230 1240 1250 1270 1280 1290 1300 1310 1320 ha0466 QVQQRTLMMRGQGLNMTPSMVAPSGMPATMSNPRIPQANAQQFPFPPNYGISQQPDPGFT ::::::::::::::::: :::::::.:::.:::::::::::::::::::::::::::::: gi|149 QVQQRTLMMRGQGLNMTSSMVAPSGIPATLSNPRIPQANAQQFPFPPNYGISQQPDPGFT 1260 1270 1280 1290 1300 1310 1330 1340 1350 1360 1370 1380 ha0466 GATTPQSPLMSPRMAHTQSPMMQQSQANPAYQAPSDINGWAQGNMGGNSMFSQQSPPHFG :::.:::::.::::::::::::::::::::::: ::.::::::::::::::::::::::: gi|149 GATAPQSPLLSPRMAHTQSPMMQQSQANPAYQASSDMNGWAQGNMGGNSMFSQQSPPHFG 1320 1330 1340 1350 1360 1370 1390 1400 1410 1420 1430 1440 ha0466 QQANTSMYSNNMNINVSMATNTGGMSSMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDPA ::::::::.::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|149 QQANTSMYNNNMNINVSMATNAGGMSSMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDPA 1380 1390 1400 1410 1420 1430 1450 1460 ha0466 LRGGNLFPNQLPGMDMIKQEGDTTRKYC ::::::::::::::::::::::..:::: gi|149 LRGGNLFPNQLPGMDMIKQEGDASRKYC 1440 1450 1460 >>gi|164523394|gb|ABY60787.1| transcriptional intermedia (1463 aa) initn: 6625 init1: 6585 opt: 9471 Z-score: 8283.9 bits: 1545.4 E(): 0 Smith-Waterman score: 9471; 95.492% identity (99.112% similar) in 1464 aa overlap (5-1468:1-1463) 10 20 30 40 50 60 ha0466 YVFKMSGMGENTSDPSRAETRKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELIFAN ::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|164 MSGMGENTSDPSRAETRKRKECPDQLGPSPKRSTEKRNREQENKYIEELAELIFAN 10 20 30 40 50 70 80 90 100 110 120 ha0466 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|164 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG 60 70 80 90 100 110 130 140 150 160 170 180 ha0466 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|164 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL 120 130 140 150 160 170 190 200 210 220 230 240 ha0466 PKSIVNGGSWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPK :::::::::::::::::.::::::::::::::: :::::::::::::::::::::::::: gi|164 PKSIVNGGSWSGEPPRRSSHTFNCRMLVKPLPDPEEEGHDNQEAHQKYETMQCFAVSQPK 180 190 200 210 220 230 250 260 270 280 290 300 ha0466 SIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|164 SIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW 240 250 260 270 280 290 310 320 330 340 350 360 ha0466 EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|164 EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI 300 310 320 330 340 350 370 380 390 400 410 420 ha0466 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQTMGKPLNPISSNSPAHQALCSGNPGQD :::::::::::::::::::::::::::::::::..::::::.::.::::::.:::::::: gi|164 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQAVGKPLNPLSSSSPAHQAMCSGNPGQD 360 370 380 390 400 410 430 440 450 460 470 480 ha0466 MTLSSNINFPINGPKEQMGMPIGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPG :::::::::::::::::::::.:::::::::::::.:::::::::::::::::::::::: gi|164 MTLSSNINFPINGPKEQMGMPMGRFGGSGGMNHVSSMQATTPQGSNYALKMNSPSQSSPG 420 430 440 450 460 470 490 500 510 520 530 540 ha0466 MNPGQPTSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA :.::::.::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|164 MTPGQPSSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYANSSLNA 480 490 500 510 520 530 550 560 570 580 590 600 ha0466 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT :::::::::::::::::::::: ::::::::::::::::::::::::::::::::::::: gi|164 LQALSEGHGVSLGSSLASPDLKTGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT 540 550 560 570 580 590 610 620 630 640 650 660 ha0466 TGQAESSCHPGEQKETNDPNLPPAVSSERADGQSRLHDSKGQTKLLQLLTTKSDQMEPSP ::::::: :::::::...:.:::::.::: :::::::::::::::::::::::::::::: gi|164 TGQAESSGHPGEQKEAGEPGLPPAVGSERPDGQSRLHDSKGQTKLLQLLTTKSDQMEPSP 600 610 620 630 640 650 670 680 690 700 710 720 ha0466 LASSLSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKDLS :::::::..:::.::::::::::::::::::::::::::::::::::::::::::::.:. gi|164 LASSLSDATKDSVGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKELN 660 670 680 690 700 710 730 740 750 760 770 780 ha0466 QESSSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA ::.::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|164 QEASSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA 720 730 740 750 760 770 790 800 810 820 830 840 ha0466 SNTKLIAMKTEKEEMSFEPGDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|164 SNTKLIAMKTEKEEMSFEPSDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK 780 790 800 810 820 830 850 860 870 880 890 900 ha0466 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|164 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP 840 850 860 870 880 890 910 920 930 940 950 960 ha0466 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGNSASRPTMPSGEWAP :::::::::::.:::::::::::::::::: ::::::::::::::..:.::.:::::::: gi|164 TGAGPFPPIRNNSPYSVIPQPGMMGNQGMIVNQGNLGNSSTGMIGSNAARPAMPSGEWAP 900 910 920 930 940 950 970 980 990 1000 1010 1020 ha0466 QSSAVRVTCAATTSAMNRPVQGGMIRNPAASIPMRPSSQPGQRQTLQSQVMNIGPSELEM :.:::::::::::.:::::.::::::::.::::::::::::::: :: :::::::::::: gi|164 QTSAVRVTCAATTGAMNRPIQGGMIRNPTASIPMRPSSQPGQRQMLQPQVMNIGPSELEM 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 ha0466 NMGGPQYSQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDE ::: :::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|164 NMG-PQYSQQQAPPNQTAPWPESILPIDQAPFASQNRQPFGSSPDDLLCPHPAAESPSDE 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 ha0466 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNIMLEQKAPVFPQQ :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|164 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNMMLEQKAPVFPQQ 1080 1090 1100 1110 1120 1130 1150 1160 1170 1180 1190 1200 ha0466 YASQAQMAQGSYSPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQHR :::::::: :::.::::::::::::::::::::::::::::::::::::::::::::::: gi|164 YASQAQMAPGSYAPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQHR 1140 1150 1160 1170 1180 1190 1210 1220 1230 1240 1250 1260 ha0466 LQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|164 LQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQ 1200 1210 1220 1230 1240 1250 1270 1280 1290 1300 1310 1320 ha0466 QVQQRTLMMRGQGLNMTPSMVAPSGMPATMSNPRIPQANAQQFPFPPNYGISQQPDPGFT :::::::::::::::::::.:::.:.::.:::::.:::::::::::::::.::::::::: gi|164 QVQQRTLMMRGQGLNMTPSVVAPGGVPAAMSNPRLPQANAQQFPFPPNYGMSQQPDPGFT 1260 1270 1280 1290 1300 1310 1330 1340 1350 1360 1370 1380 ha0466 GATTPQSPLMSPRMAHTQSPMMQQSQANPAYQAPSDINGWAQGNMGGNSMFSQQSPPHFG ::..:::::::::::::::::.:::: :::::: ::.::::::.:::::::::::::::: gi|164 GAAAPQSPLMSPRMAHTQSPMLQQSQPNPAYQASSDMNGWAQGSMGGNSMFSQQSPPHFG 1320 1330 1340 1350 1360 1370 1390 1400 1410 1420 1430 1440 ha0466 QQANTSMYSNNMNINVSMATNTGGMSSMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDPA :::::::.:::::.:::::.:::::.::::::::::::::::::::::::::::::::: gi|164 PQANTSMYNNNMNISVSMATSTGGMSNMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDPA 1380 1390 1400 1410 1420 1430 1450 1460 ha0466 LRGGNLFPNQLPGMDMIKQEGDTTRKYC ::::.:::::::::::::::::..:::: gi|164 LRGGSLFPNQLPGMDMIKQEGDASRKYC 1440 1450 1460 >>gi|194672789|ref|XP_584905.4| PREDICTED: similar to Nu (1465 aa) initn: 8074 init1: 8074 opt: 9376 Z-score: 8200.8 bits: 1530.0 E(): 0 Smith-Waterman score: 9376; 94.130% identity (98.498% similar) in 1465 aa overlap (5-1468:1-1465) 10 20 30 40 50 60 ha0466 YVFKMSGMGENTSDPSRAETRKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELIFAN :::::::: :::::::::::::::::::::::.::::::::::::::::::::::: gi|194 MSGMGENTPDPSRAETRKRKECPDQLGPSPKRSTEKRNREQENKYIEELAELIFAN 10 20 30 40 50 70 80 90 100 110 120 ha0466 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG 60 70 80 90 100 110 130 140 150 160 170 180 ha0466 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL 120 130 140 150 160 170 190 200 210 220 230 240 ha0466 PKSIVNGGSWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPK ::::::::.:::::::::::::::::::::::.::::::::::::::::::::::::::: gi|194 PKSIVNGGAWSGEPPRRNSHTFNCRMLVKPLPESEEEGHDNQEAHQKYETMQCFAVSQPK 180 190 200 210 220 230 250 260 270 280 290 300 ha0466 SIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|194 SIKEEGEDLQSCLICVARRVPMKERPALPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW 240 250 260 270 280 290 310 320 330 340 350 360 ha0466 EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI 300 310 320 330 340 350 370 380 390 400 410 420 ha0466 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQTMGKPLNPISSNSPAHQALCSGNPGQD :::::::::::::::.:::::::::::::::::.::::::::::.:::: :.:::::::: gi|194 RSQTTNEPQLVISLHVLHREQNVCVMNPDLTGQAMGKPLNPISSSSPAHPAMCSGNPGQD 360 370 380 390 400 410 430 440 450 460 470 480 ha0466 MTLSSNINFPINGPKEQMGMPIGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPG ::::::::::.::::::::::.:::::::::::::.:::::::::::::::::::::::: gi|194 MTLSSNINFPMNGPKEQMGMPMGRFGGSGGMNHVSSMQATTPQGSNYALKMNSPSQSSPG 420 430 440 450 460 470 490 500 510 520 530 540 ha0466 MNPGQPTSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA .:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LNPGQPSSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA 480 490 500 510 520 530 550 560 570 580 590 600 ha0466 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT :::::::::::::::::::::::::::::::::::: ::::::::::::::::::: :: gi|194 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPQLSKMGSLDSKDCFGLYGEPPEGP 540 550 560 570 580 590 610 620 630 640 650 660 ha0466 TGQAESSCHPGEQKETNDPNLPPAVSSERADGQSRLHDSKGQTKLLQLLTTKSDQMEPSP .: ::::::::: :. .. .:::: :.:: :::::: :.::::::::::::::::.:::: gi|194 AGPAESSCHPGEPKDPSEAGLPPAGSNERPDGQSRLLDNKGQTKLLQLLTTKSDQIEPSP 600 610 620 630 640 650 670 680 690 700 710 720 ha0466 LASSLSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKDLS : :::::::::::::::: ::::::::::::::::::::::::::::::::::::::.:: gi|194 LPSSLSDTNKDSTGSLPGPGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKELS 660 670 680 690 700 710 730 740 750 760 770 780 ha0466 QESSSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA ::.::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QEASSTAPGSEATIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA 720 730 740 750 760 770 790 800 810 820 830 840 ha0466 SNTKLIAMKTEKEEMSFEPGDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK :::::::.:::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|194 SNTKLIALKTEKEEMSFEPSDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK 780 790 800 810 820 830 850 860 870 880 890 900 ha0466 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP :::::::::::::.::::::::::::.:: ::::::::::::::::::::.::::::::: gi|194 QAIINDLMQLTAESSPVTPVGAQKTAMRIPQSTFNNPRPGQLGRLLPNQNFPLDITLQSP 840 850 860 870 880 890 910 920 930 940 950 960 ha0466 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGNSASRPTMPSGEWAP ::::::::::::::: :::::::::::::::::::::::::::::..:.::::::::::: gi|194 TGAGPFPPIRNSSPYPVIPQPGMMGNQGMIGNQGNLGNSSTGMIGSNAARPTMPSGEWAP 900 910 920 930 940 950 970 980 990 1000 1010 1020 ha0466 QSSAVRVTCAATTSAMNRPVQGGMIRNPAASIPMRPSSQPGQRQTLQSQVMNIGPSELEM :: :::::::::..:::::.::::::::.:::::::.::::::: :: ::::.::::::: gi|194 QSPAVRVTCAATSNAMNRPIQGGMIRNPTASIPMRPNSQPGQRQMLQPQVMNMGPSELEM 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 ha0466 NMGGPQYSQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDE :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: gi|194 NMGGPQYSQQQAPPNQTAPWPESILPIDQAPFASQNRQPFGSSPDDLLCPHPAAESPSDE 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 ha0466 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNIMLEQKAPVFPQQ ::::::::.:::::::::::::::::::::::::.:::::::::::..:::::.:::::: gi|194 GALLDQLYMALRNFDGLEEIDRALGIPELVSQSQGVDPEQFSSQDSSLMLEQKTPVFPQQ 1080 1090 1100 1110 1120 1130 1150 1160 1170 1180 1190 1200 ha0466 YASQAQMAQGSYSPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQHR ::::::::::::.::::::::::::::::::::::::::::::::::.:::::::::::: gi|194 YASQAQMAQGSYTPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQSQPNQLRLQLQHR 1140 1150 1160 1170 1180 1190 1210 1220 1230 1240 1250 ha0466 LQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMH-QQ ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|194 LQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHHQQ 1200 1210 1220 1230 1240 1250 1260 1270 1280 1290 1300 1310 ha0466 QQVQQRTLMMRGQGLNMTPSMVAPSGMPATMSNPRIPQANAQQFPFPPNYGISQQPDPGF ::::::::::::::::::::.:::::.::.:::::::::::::::::::::::::::::: gi|194 QQVQQRTLMMRGQGLNMTPSVVAPSGVPAAMSNPRIPQANAQQFPFPPNYGISQQPDPGF 1260 1270 1280 1290 1300 1310 1320 1330 1340 1350 1360 1370 ha0466 TGATTPQSPLMSPRMAHTQSPMMQQSQANPAYQAPSDINGWAQGNMGGNSMFSQQSPPHF :::..:::::.:::.:::::::.::::::::::: ::.::::::.::.:::::::::::: gi|194 TGAAAPQSPLISPRLAHTQSPMLQQSQANPAYQASSDMNGWAQGSMGANSMFSQQSPPHF 1320 1330 1340 1350 1360 1370 1380 1390 1400 1410 1420 1430 ha0466 GQQANTSMYSNNMNINVSMATNTGGMSSMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDP .::::::::.::::::::::::::::..:::::::::::::::::::::::::::::::: gi|194 AQQANTSMYNNNMNINVSMATNTGGMNNMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDP 1380 1390 1400 1410 1420 1430 1440 1450 1460 ha0466 ALRGGNLFPNQLPGMDMIKQEGDTTRKYC :::::.:::.:::::::::::::..:::: gi|194 ALRGGGLFPSQLPGMDMIKQEGDASRKYC 1440 1450 1460 >>gi|118026940|ref|NP_032704.2| nuclear receptor coactiv (1462 aa) initn: 8014 init1: 8014 opt: 9357 Z-score: 8184.2 bits: 1527.0 E(): 0 Smith-Waterman score: 9357; 94.194% identity (98.634% similar) in 1464 aa overlap (5-1468:1-1462) 10 20 30 40 50 60 ha0466 YVFKMSGMGENTSDPSRAETRKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELIFAN ::::::::::::::::::::::::::::::::.::::::::::::::::::::::: gi|118 MSGMGENTSDPSRAETRKRKECPDQLGPSPKRSTEKRNREQENKYIEELAELIFAN 10 20 30 40 50 70 80 90 100 110 120 ha0466 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG 60 70 80 90 100 110 130 140 150 160 170 180 ha0466 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|118 PMMLEALDGFFFVVNLEGSVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL 120 130 140 150 160 170 190 200 210 220 230 240 ha0466 PKSIVNGGSWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPK :::.:::::::::::::.::::::::::::::::::::::.::::::::.:::::::::: gi|118 PKSMVNGGSWSGEPPRRSSHTFNCRMLVKPLPDSEEEGHDSQEAHQKYEAMQCFAVSQPK 180 190 200 210 220 230 250 260 270 280 290 300 ha0466 SIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|118 SIKEEGEDLQSCLICVARRVPMKERPTLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW 240 250 260 270 280 290 310 320 330 340 350 360 ha0466 EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI ::::::::::::.::::::.:::::::::::::::::::::::::::::::::::::::: gi|118 EDLVRRCIQKFHTQHEGESLSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI 300 310 320 330 340 350 370 380 390 400 410 420 ha0466 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQTMGKPLNPISSNSPAHQALCSGNPGQD :::::::::::::::::::::::::::::::::.::::::::::.::::::::::::::: gi|118 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQAMGKPLNPISSSSPAHQALCSGNPGQD 360 370 380 390 400 410 430 440 450 460 470 480 ha0466 MTLSSNINFPINGPKEQMGMPIGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPG :::.::::::.::::::::::.:::::::::::::::::::::::::::::::::::::: gi|118 MTLGSNINFPMNGPKEQMGMPMGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPG 420 430 440 450 460 470 490 500 510 520 530 540 ha0466 MNPGQPTSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA ::::: .:.::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|118 MNPGQASSVLSPRQRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA 480 490 500 510 520 530 550 560 570 580 590 600 ha0466 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT 540 550 560 570 580 590 610 620 630 640 650 660 ha0466 TGQAESSCHPGEQKETNDPNLPPAVSSERADGQSRLHDSKGQTKLLQLLTTKSDQMEPSP :::::.:::: ::: :: ..: :.:..::.:.::::::::::::::::::::::::::: gi|118 TGQAEASCHPEEQKGPNDSSMPQAASGDRAEGHSRLHDSKGQTKLLQLLTTKSDQMEPSP 600 610 620 630 640 650 670 680 690 700 710 720 ha0466 LASSLSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKDLS : :::::::::::::::: ::::::::::::::::::::::::::::::::::::::.:: gi|118 LPSSLSDTNKDSTGSLPGPGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKELS 660 670 680 690 700 710 730 740 750 760 770 780 ha0466 QESSSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA :::::::::::::.::::.::::::::::::::::::::::::::::::::::::::::: gi|118 QESSSTAPGSEVTVKQEPASPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA 720 730 740 750 760 770 790 800 810 820 830 840 ha0466 SNTKLIAMKTEKEEMSFEPGDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK :::::::::: :::.::::.::::::::::::::::::::::::::::::::::.::::: gi|118 SNTKLIAMKTVKEEVSFEPSDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPTGSVDK 780 790 800 810 820 830 850 860 870 880 890 900 ha0466 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP ::::::::::::..::: :.::::.:::.::::::::::::::::::::::::::::::: gi|118 QAIINDLMQLTADSSPVPPAGAQKAALRMSQSTFNNPRPGQLGRLLPNQNLPLDITLQSP 840 850 860 870 880 890 910 920 930 940 950 960 ha0466 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGNSASRPTMPSGEWAP :::::::::::::::::::::::::::::.:.::::::.::::::.:.:::.:::::::: gi|118 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMLGSQGNLGNNSTGMIGSSTSRPSMPSGEWAP 900 910 920 930 940 950 970 980 990 1000 1010 1020 ha0466 QSSAVRVTCAATTSAMNRPVQGGMIRNPAASIPMRPSSQPGQRQTLQSQVMNIGPSELEM :: ::::::::::.::::::::::::::.:::::: .::::::: ::::::::::::::: gi|118 QSPAVRVTCAATTGAMNRPVQGGMIRNPTASIPMRANSQPGQRQMLQSQVMNIGPSELEM 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 ha0466 NMGGPQYSQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDE :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|118 NMGGPQYNQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDE 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 ha0466 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNIMLEQKAPVFPQQ ::::::::::::::::::::::::::::::::::::: ::::::.:.:::::: :::::: gi|118 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDAEQFSSQESSIMLEQKPPVFPQQ 1080 1090 1100 1110 1120 1130 1150 1160 1170 1180 1190 1200 ha0466 YASQAQMAQGSYSPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQHR ::::::::::.:.::::::::::::::.:.::::::::::::::.::::::::::::::: gi|118 YASQAQMAQGGYNPMQDPNFHTMGQRPNYTTLRMQPRPGLRPTGIVQNQPNQLRLQLQHR 1140 1150 1160 1170 1180 1190 1210 1220 1230 1240 1250 1260 ha0466 LQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQ :::::::::::::::.:::::::::::::::::::::::::::::::::::::::: :: gi|118 LQAQQNRQPLMNQISSVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQM--QQ 1200 1210 1220 1230 1240 1250 1270 1280 1290 1300 1310 1320 ha0466 QVQQRTLMMRGQGLNMTPSMVAPSGMPATMSNPRIPQANAQQFPFPPNYGISQQPDPGFT :::::::::::::::.:::::::.:.::.::::::::::::::::::::::::::::::: gi|118 QVQQRTLMMRGQGLNVTPSMVAPAGLPAAMSNPRIPQANAQQFPFPPNYGISQQPDPGFT 1260 1270 1280 1290 1300 1310 1330 1340 1350 1360 1370 1380 ha0466 GATTPQSPLMSPRMAHTQSPMMQQSQANPAYQAPSDINGWAQGNMGGNSMFSQQSPPHFG :::::::::::::::::::::::::::::::: ::.::::::.:::::::::::::::: gi|118 GATTPQSPLMSPRMAHTQSPMMQQSQANPAYQPTSDMNGWAQGSMGGNSMFSQQSPPHFG 1320 1330 1340 1350 1360 1370 1390 1400 1410 1420 1430 1440 ha0466 QQANTSMYSNNMNINVSMATNTGGMSSMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDPA ::::::::::::::.:::::::::.:::::::::.::::::::::::: ::::::::::: gi|118 QQANTSMYSNNMNISVSMATNTGGLSSMNQMTGQMSMTSVTSVPTSGLPSMGPEQVNDPA 1380 1390 1400 1410 1420 1430 1450 1460 ha0466 LRGGNLFPNQLPGMDMIKQEGDTTRKYC ::::::::::::::::::::::..:::: gi|118 LRGGNLFPNQLPGMDMIKQEGDASRKYC 1440 1450 1460 >>gi|13626601|sp|Q61026|NCOA2_MOUSE Nuclear receptor coa (1462 aa) initn: 8009 init1: 8009 opt: 9341 Z-score: 8170.2 bits: 1524.4 E(): 0 Smith-Waterman score: 9341; 94.057% identity (98.566% similar) in 1464 aa overlap (5-1468:1-1462) 10 20 30 40 50 60 ha0466 YVFKMSGMGENTSDPSRAETRKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELIFAN ::::::::::::::::::::::::::::::::.:::::::::::::::::.::::: gi|136 MSGMGENTSDPSRAETRKRKECPDQLGPSPKRSTEKRNREQENKYIEELADLIFAN 10 20 30 40 50 70 80 90 100 110 120 ha0466 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 FNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALG 60 70 80 90 100 110 130 140 150 160 170 180 ha0466 PMMLEALDGFFFVVNLEGNVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|136 PMMLEALDGFFFVVNLEGSVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLL 120 130 140 150 160 170 190 200 210 220 230 240 ha0466 PKSIVNGGSWSGEPPRRNSHTFNCRMLVKPLPDSEEEGHDNQEAHQKYETMQCFAVSQPK :::.:::::::::::::.::::::::::::::::::::::.::::::::.:::::::::: gi|136 PKSMVNGGSWSGEPPRRTSHTFNCRMLVKPLPDSEEEGHDSQEAHQKYEAMQCFAVSQPK 180 190 200 210 220 230 250 260 270 280 290 300 ha0466 SIKEEGEDLQSCLICVARRVPMKERPVLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|136 SIKEEGEDLQSCLICVARRVPMKERPTLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGW 240 250 260 270 280 290 310 320 330 340 350 360 ha0466 EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI ::::::::::::.::::::.:::::::::::::::::::::::::::::::::::::::: gi|136 EDLVRRCIQKFHTQHEGESLSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLI 300 310 320 330 340 350 370 380 390 400 410 420 ha0466 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQTMGKPLNPISSNSPAHQALCSGNPGQD :::::::::::::::::::::::::::::::::.::::::::::.::::::::::::::: gi|136 RSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQAMGKPLNPISSSSPAHQALCSGNPGQD 360 370 380 390 400 410 430 440 450 460 470 480 ha0466 MTLSSNINFPINGPKEQMGMPIGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPG :::.::::::.::::::::::.:::::::::::::::::::::::::::::::::::::: gi|136 MTLGSNINFPMNGPKEQMGMPMGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPG 420 430 440 450 460 470 490 500 510 520 530 540 ha0466 MNPGQPTSMLSPRHRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA ::::: .:.::::.:::::::::::::::::::::::::::::::::::::::::::::: gi|136 MNPGQASSVLSPRQRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNA 480 490 500 510 520 530 550 560 570 580 590 600 ha0466 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 LQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGT 540 550 560 570 580 590 610 620 630 640 650 660 ha0466 TGQAESSCHPGEQKETNDPNLPPAVSSERADGQSRLHDSKGQTKLLQLLTTKSDQMEPSP :::::.:::: ::: :: ..: :.:..::.:.::::::::::::::::::::::::::: gi|136 TGQAEASCHPEEQKGPNDSSMPQAASGDRAEGHSRLHDSKGQTKLLQLLTTKSDQMEPSP 600 610 620 630 640 650 670 680 690 700 710 720 ha0466 LASSLSDTNKDSTGSLPGSGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKDLS : :::::::::::::::: ::::::::::::::::::::::::::::::::::::::.:: gi|136 LPSSLSDTNKDSTGSLPGPGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKELS 660 670 680 690 700 710 730 740 750 760 770 780 ha0466 QESSSTAPGSEVTIKQEPVSPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA :::::::::::::.::::.::::::::::::::::::::::::::::::::::::::::: gi|136 QESSSTAPGSEVTVKQEPASPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPA 720 730 740 750 760 770 790 800 810 820 830 840 ha0466 SNTKLIAMKTEKEEMSFEPGDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPAGSVDK :::::::::: :::.::::.::::::::::::::::::::::::::::::::::.::::: gi|136 SNTKLIAMKTVKEEVSFEPSDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPTGSVDK 780 790 800 810 820 830 850 860 870 880 890 900 ha0466 QAIINDLMQLTAENSPVTPVGAQKTALRISQSTFNNPRPGQLGRLLPNQNLPLDITLQSP ::::::::::::..::: :.::::.:::.::::::::::::::::::::::::::::::: gi|136 QAIINDLMQLTADSSPVPPAGAQKAALRMSQSTFNNPRPGQLGRLLPNQNLPLDITLQSP 840 850 860 870 880 890 910 920 930 940 950 960 ha0466 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMIGNQGNLGNSSTGMIGNSASRPTMPSGEWAP :::::::::::::::::::::::::::::.:.::::::.::::::.:.:::.:::::::: gi|136 TGAGPFPPIRNSSPYSVIPQPGMMGNQGMLGSQGNLGNNSTGMIGSSTSRPSMPSGEWAP 900 910 920 930 940 950 970 980 990 1000 1010 1020 ha0466 QSSAVRVTCAATTSAMNRPVQGGMIRNPAASIPMRPSSQPGQRQTLQSQVMNIGPSELEM :: ::::::::::.::::::::::::::.:::::: .::::::: ::::::::::::::: gi|136 QSPAVRVTCAATTGAMNRPVQGGMIRNPTASIPMRANSQPGQRQMLQSQVMNIGPSELEM 960 970 980 990 1000 1010 1030 1040 1050 1060 1070 1080 ha0466 NMGGPQYSQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDE :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|136 NMGGPQYNQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDE 1020 1030 1040 1050 1060 1070 1090 1100 1110 1120 1130 1140 ha0466 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDPEQFSSQDSNIMLEQKAPVFPQQ ::::::::::::::::::::::::::::::::::::: ::::::.:.:::::: :::::: gi|136 GALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDAEQFSSQESSIMLEQKPPVFPQQ 1080 1090 1100 1110 1120 1130 1150 1160 1170 1180 1190 1200 ha0466 YASQAQMAQGSYSPMQDPNFHTMGQRPSYATLRMQPRPGLRPTGLVQNQPNQLRLQLQHR ::::::::::.:.::::::::::::::.:.::::::::::::::.::::::::::::::: gi|136 YASQAQMAQGGYNPMQDPNFHTMGQRPNYTTLRMQPRPGLRPTGIVQNQPNQLRLQLQHR 1140 1150 1160 1170 1180 1190 1210 1220 1230 1240 1250 1260 ha0466 LQAQQNRQPLMNQISNVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMHQQQ :::::::::::::::.:::::::::::::::::::::::::::::::::::::::: :: gi|136 LQAQQNRQPLMNQISSVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQM--QQ 1200 1210 1220 1230 1240 1250 1270 1280 1290 1300 1310 1320 ha0466 QVQQRTLMMRGQGLNMTPSMVAPSGMPATMSNPRIPQANAQQFPFPPNYGISQQPDPGFT :::::::::::::::.:::::::.:.::.::::::::::::::::::::::::::::::: gi|136 QVQQRTLMMRGQGLNVTPSMVAPAGLPAAMSNPRIPQANAQQFPFPPNYGISQQPDPGFT 1260 1270 1280 1290 1300 1310 1330 1340 1350 1360 1370 1380 ha0466 GATTPQSPLMSPRMAHTQSPMMQQSQANPAYQAPSDINGWAQGNMGGNSMFSQQSPPHFG :::::::::::::::::::::::::::::::: ::.::::::.:::::::::::::::: gi|136 GATTPQSPLMSPRMAHTQSPMMQQSQANPAYQPTSDMNGWAQGSMGGNSMFSQQSPPHFG 1320 1330 1340 1350 1360 1370 1390 1400 1410 1420 1430 1440 ha0466 QQANTSMYSNNMNINVSMATNTGGMSSMNQMTGQISMTSVTSVPTSGLSSMGPEQVNDPA ::::::::::::::.:::::::::.::::::: :.::::::::::::: ::::::::::: gi|136 QQANTSMYSNNMNISVSMATNTGGLSSMNQMTCQMSMTSVTSVPTSGLPSMGPEQVNDPA 1380 1390 1400 1410 1420 1430 1450 1460 ha0466 LRGGNLFPNQLPGMDMIKQEGDTTRKYC ::::::::::::::::::::::..:::: gi|136 LRGGNLFPNQLPGMDMIKQEGDASRKYC 1440 1450 1460 1468 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Mon Aug 11 22:17:05 2008 done: Mon Aug 11 22:19:31 2008 Total Scan time: 1240.590 Total Display time: 1.370 Function used was FASTA [version 34.26.5 April 26, 2007]