# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oha06190.fasta.nr -Q ha06190.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ha06190, 1085 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8933710 sequences Expectation_n fit: rho(ln(x))= 5.0237+/-0.000192; mu= 15.5058+/- 0.011 mean_var=84.4397+/-16.498, 0's: 33 Z-trim: 266 B-trim: 477 in 2/63 Lambda= 0.139573 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 39, opt: 27, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|168277390|dbj|BAG10673.1| proto-oncogene tyrosi (1072) 7286 1477.9 0 gi|158257046|dbj|BAF84496.1| unnamed protein produ (1072) 7282 1477.1 0 gi|13279041|gb|AAH04257.1| Ret proto-oncogene [Hom (1072) 7267 1474.1 0 gi|33303931|gb|AAQ02473.1| ret proto-oncogene [syn (1073) 7267 1474.1 0 gi|547807|sp|P07949.3|RET_HUMAN RecName: Full=Prot (1114) 7226 1465.9 0 gi|119606990|gb|EAW86584.1| ret proto-oncogene (mu (1106) 7218 1464.2 0 gi|5419753|emb|CAB46483.1| RET tyrosine kinase rec (1091) 7074 1435.2 0 gi|194042652|ref|XP_001926378.1| PREDICTED: ret pr (1078) 6296 1278.6 0 gi|73998093|ref|XP_543915.2| PREDICTED: similar to (1108) 6292 1277.8 0 gi|149049627|gb|EDM02081.1| ret proto-oncogene, is (1073) 6266 1272.5 0 gi|149049628|gb|EDM02082.1| ret proto-oncogene, is (1115) 6206 1260.5 0 gi|148667176|gb|EDK99592.1| ret proto-oncogene, is (1159) 6186 1256.5 0 gi|10638070|emb|CAC10569.1| receptor tyrosine kina (1074) 6168 1252.8 0 gi|26342074|dbj|BAC34699.1| unnamed protein produc (1073) 6132 1245.5 0 gi|10638066|emb|CAC10568.1| receptor tyrosine kina (1116) 6108 1240.7 0 gi|51338723|sp|P35546.2|RET_MOUSE RecName: Full=Pr (1115) 6072 1233.5 0 gi|53974|emb|CAA48013.1| ret proto-oncogene [Mus m (1115) 6038 1226.6 0 gi|194042654|ref|XP_001926404.1| PREDICTED: ret pr ( 982) 5792 1177.0 0 gi|119606985|gb|EAW86579.1| ret proto-oncogene (mu ( 818) 5544 1127.0 0 gi|38275|emb|CAA31408.1| unnamed protein product [ ( 860) 5484 1115.0 0 gi|119606984|gb|EAW86578.1| ret proto-oncogene (mu ( 852) 5476 1113.4 0 gi|871042|emb|CAA90078.1| ret protein [Gallus gall (1064) 4778 972.9 0 gi|912987|gb|AAB33460.1| c-ret proto-oncogene prod (1107) 4692 955.6 0 gi|213627643|gb|AAI70177.1| Ret proto-oncogene [Xe (1059) 4403 897.4 0 gi|9837361|gb|AAG00544.1|AF286643_1 c-ret [Xenopus (1059) 4399 896.6 0 gi|213627645|gb|AAI70179.1| Ret proto-oncogene [Xe (1059) 4396 896.0 0 gi|157886027|emb|CAP09245.1| receptor tyrosine kin (1045) 4172 850.9 0 gi|157886026|emb|CAP09244.1| receptor tyrosine kin (1106) 4126 841.6 0 gi|2258410|gb|AAB63283.1| receptor tyrosine kinase (1106) 4114 839.2 0 gi|4204904|gb|AAD10845.1| receptor protein tyrosin (1106) 4070 830.4 0 gi|2102660|emb|CAA64146.1| receptor tyrosine kinas (1106) 3978 811.8 0 gi|26336699|dbj|BAC32032.1| unnamed protein produc ( 795) 3966 809.3 0 gi|340026|gb|AAA36786.1| tyrosine kinase ( 805) 3300 675.2 4.5e-191 gi|13111770|gb|AAH03072.1| RET protein [Homo sapie ( 458) 2897 593.8 8e-167 gi|119606987|gb|EAW86581.1| ret proto-oncogene (mu ( 442) 2784 571.0 5.5e-160 gi|37612|emb|CAA39792.1| urf-ret [Homo sapiens] ( 435) 2437 501.1 5.9e-139 gi|163964195|gb|AAA60266.2| RET tyrosine kinase/cA ( 596) 2434 500.7 1.1e-138 gi|36009|emb|CAA33787.1| retII [Homo sapiens] ( 899) 2380 490.0 2.8e-135 gi|71979961|gb|AAZ57203.1| HOOK3-RET fusion protei ( 776) 2379 489.7 2.9e-135 gi|190700|gb|AAA36524.1| papillary thyroid carcino ( 503) 2370 487.7 7.5e-135 gi|149632184|ref|XP_001507715.1| PREDICTED: simila ( 665) 2211 455.8 4e-125 gi|114794789|pdb|2IVS|A Chain A, Crystal Structure ( 314) 2081 429.3 1.8e-117 gi|114794791|pdb|2IVT|A Chain A, Crystal Structure ( 314) 2072 427.5 6.3e-117 gi|114794793|pdb|2IVV|A Chain A, Crystal Structure ( 314) 2066 426.3 1.5e-116 gi|36001|emb|CAA33333.1| ret preprotein (AA -28 to ( 280) 1919 396.6 1.1e-107 gi|545342|gb|AAB29873.1| c-ret product receptor ty ( 282) 1809 374.5 5.1e-101 gi|1911680|gb|AAB50793.1| c-ret 36=proto-oncogene ( 226) 1456 303.3 1.1e-79 gi|22204141|gb|AAM92560.1| receptor tyrosine kinas ( 204) 1288 269.4 1.5e-69 gi|149633527|ref|XP_001506313.1| PREDICTED: simila ( 458) 1270 266.2 3.4e-68 gi|91091118|ref|XP_969283.1| PREDICTED: similar to (1065) 1230 258.5 1.6e-65 >>gi|168277390|dbj|BAG10673.1| proto-oncogene tyrosine-p (1072 aa) initn: 7286 init1: 7286 opt: 7286 Z-score: 7923.9 bits: 1477.9 E(): 0 Smith-Waterman score: 7286; 100.000% identity (100.000% similar) in 1072 aa overlap (14-1085:1-1072) 10 20 30 40 50 60 ha0619 PQSLQPWPQRARAMAKATSGAAGLRLLLLLLLPLLGKVALGLYFSRDAYWEKLYVDQAAG ::::::::::::::::::::::::::::::::::::::::::::::: gi|168 MAKATSGAAGLRLLLLLLLPLLGKVALGLYFSRDAYWEKLYVDQAAG 10 20 30 40 70 80 90 100 110 120 ha0619 TPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWICIQEDTGLLYLNRSLDHSSWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 TPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWICIQEDTGLLYLNRSLDHSSWE 50 60 70 80 90 100 130 140 150 160 170 180 ha0619 KLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 KLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCF 110 120 130 140 150 160 190 200 210 220 230 240 ha0619 PETRPSFRIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTRW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 PETRPSFRIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTRW 170 180 190 200 210 220 250 260 270 280 290 300 ha0619 ALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEFKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 ALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEFKR 230 240 250 260 270 280 310 320 330 340 350 360 ha0619 KEDTVVATLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 KEDTVVATLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSFV 290 300 310 320 330 340 370 380 390 400 410 420 ha0619 RATVHDYRLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 RATVHDYRLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPST 350 360 370 380 390 400 430 440 450 460 470 480 ha0619 YSLSVSRRARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 YSLSVSRRARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFV 410 420 430 440 450 460 490 500 510 520 530 540 ha0619 NDTKALRRPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 NDTKALRRPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRLE 470 480 490 500 510 520 550 560 570 580 590 600 ha0619 CEECGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 CEECGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCLR 530 540 550 560 570 580 610 620 630 640 650 660 ha0619 GSIVGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 GSIVGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSFI 590 600 610 620 630 640 670 680 690 700 710 720 ha0619 VSVLLSAFCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVSVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 VSVLLSAFCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVSVD 650 660 670 680 690 700 730 740 750 760 770 780 ha0619 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 710 720 730 740 750 760 790 800 810 820 830 840 ha0619 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 770 780 790 800 810 820 850 860 870 880 890 900 ha0619 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK 830 840 850 860 870 880 910 920 930 940 950 960 ha0619 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 890 900 910 920 930 940 970 980 990 1000 1010 1020 ha0619 GGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 GGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 ha0619 MMVKRRDYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYGRISH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|168 MMVKRRDYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYGRISH 1010 1020 1030 1040 1050 1060 ha0619 AFTRF ::::: gi|168 AFTRF 1070 >>gi|158257046|dbj|BAF84496.1| unnamed protein product [ (1072 aa) initn: 7282 init1: 7282 opt: 7282 Z-score: 7919.6 bits: 1477.1 E(): 0 Smith-Waterman score: 7282; 99.907% identity (100.000% similar) in 1072 aa overlap (14-1085:1-1072) 10 20 30 40 50 60 ha0619 PQSLQPWPQRARAMAKATSGAAGLRLLLLLLLPLLGKVALGLYFSRDAYWEKLYVDQAAG ::::::::::::::::::::::::::::::::::::::::::::::: gi|158 MAKATSGAAGLRLLLLLLLPLLGKVALGLYFSRDAYWEKLYVDQAAG 10 20 30 40 70 80 90 100 110 120 ha0619 TPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWICIQEDTGLLYLNRSLDHSSWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 TPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWICIQEDTGLLYLNRSLDHSSWE 50 60 70 80 90 100 130 140 150 160 170 180 ha0619 KLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 KLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCF 110 120 130 140 150 160 190 200 210 220 230 240 ha0619 PETRPSFRIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTRW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 PETRPSFRIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTRW 170 180 190 200 210 220 250 260 270 280 290 300 ha0619 ALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEFKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 ALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEFKR 230 240 250 260 270 280 310 320 330 340 350 360 ha0619 KEDTVVATLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 KEDTVVATLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSFV 290 300 310 320 330 340 370 380 390 400 410 420 ha0619 RATVHDYRLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 RATVHDYRLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPST 350 360 370 380 390 400 430 440 450 460 470 480 ha0619 YSLSVSRRARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 YSLSVSRRARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFV 410 420 430 440 450 460 490 500 510 520 530 540 ha0619 NDTKALRRPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 NDTKALRRPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRLE 470 480 490 500 510 520 550 560 570 580 590 600 ha0619 CEECGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 CEECGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCLR 530 540 550 560 570 580 610 620 630 640 650 660 ha0619 GSIVGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 GSIVGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSFI 590 600 610 620 630 640 670 680 690 700 710 720 ha0619 VSVLLSAFCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVSVD ::::::::::::::::.::::::::::::::::::::::::::::::::::::::::::: gi|158 VSVLLSAFCIHCYHKFSHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVSVD 650 660 670 680 690 700 730 740 750 760 770 780 ha0619 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 710 720 730 740 750 760 790 800 810 820 830 840 ha0619 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 770 780 790 800 810 820 850 860 870 880 890 900 ha0619 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK 830 840 850 860 870 880 910 920 930 940 950 960 ha0619 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 890 900 910 920 930 940 970 980 990 1000 1010 1020 ha0619 GGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 GGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 ha0619 MMVKRRDYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYGRISH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|158 MMVKRRDYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYGRISH 1010 1020 1030 1040 1050 1060 ha0619 AFTRF ::::: gi|158 AFTRF 1070 >>gi|13279041|gb|AAH04257.1| Ret proto-oncogene [Homo sa (1072 aa) initn: 7267 init1: 7267 opt: 7267 Z-score: 7903.3 bits: 1474.1 E(): 0 Smith-Waterman score: 7267; 99.813% identity (99.907% similar) in 1072 aa overlap (14-1085:1-1072) 10 20 30 40 50 60 ha0619 PQSLQPWPQRARAMAKATSGAAGLRLLLLLLLPLLGKVALGLYFSRDAYWEKLYVDQAAG ::::::::::::::::::::::::::::::::::::::::::::::: gi|132 MAKATSGAAGLRLLLLLLLPLLGKVALGLYFSRDAYWEKLYVDQAAG 10 20 30 40 70 80 90 100 110 120 ha0619 TPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWICIQEDTGLLYLNRSLDHSSWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 TPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWICIQEDTGLLYLNRSLDHSSWE 50 60 70 80 90 100 130 140 150 160 170 180 ha0619 KLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 KLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCF 110 120 130 140 150 160 190 200 210 220 230 240 ha0619 PETRPSFRIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTRW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 PETRPSFRIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTRW 170 180 190 200 210 220 250 260 270 280 290 300 ha0619 ALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEFKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 ALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEFKR 230 240 250 260 270 280 310 320 330 340 350 360 ha0619 KEDTVVATLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 KEDTVVATLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSFV 290 300 310 320 330 340 370 380 390 400 410 420 ha0619 RATVHDYRLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 RATVHDYRLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPST 350 360 370 380 390 400 430 440 450 460 470 480 ha0619 YSLSVSRRARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 YSLSVSRRARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFV 410 420 430 440 450 460 490 500 510 520 530 540 ha0619 NDTKALRRPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 NDTKALRRPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRLE 470 480 490 500 510 520 550 560 570 580 590 600 ha0619 CEECGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 CEECGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCLR 530 540 550 560 570 580 610 620 630 640 650 660 ha0619 GSIVGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 GSIVGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSFI 590 600 610 620 630 640 670 680 690 700 710 720 ha0619 VSVLLSAFCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVSVD :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|132 VSVLLSAFCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSSARRPSLDSMENQVSVD 650 660 670 680 690 700 730 740 750 760 770 780 ha0619 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 710 720 730 740 750 760 790 800 810 820 830 840 ha0619 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 770 780 790 800 810 820 850 860 870 880 890 900 ha0619 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK 830 840 850 860 870 880 910 920 930 940 950 960 ha0619 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 890 900 910 920 930 940 970 980 990 1000 1010 1020 ha0619 GGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK :::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::: gi|132 GGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYCLMLQCWKQEPDKRPVFADISKDLEK 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 ha0619 MMVKRRDYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYGRISH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|132 MMVKRRDYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYGRISH 1010 1020 1030 1040 1050 1060 ha0619 AFTRF ::::: gi|132 AFTRF 1070 >>gi|33303931|gb|AAQ02473.1| ret proto-oncogene [synthet (1073 aa) initn: 7267 init1: 7267 opt: 7267 Z-score: 7903.3 bits: 1474.1 E(): 0 Smith-Waterman score: 7267; 99.813% identity (99.907% similar) in 1072 aa overlap (14-1085:1-1072) 10 20 30 40 50 60 ha0619 PQSLQPWPQRARAMAKATSGAAGLRLLLLLLLPLLGKVALGLYFSRDAYWEKLYVDQAAG ::::::::::::::::::::::::::::::::::::::::::::::: gi|333 MAKATSGAAGLRLLLLLLLPLLGKVALGLYFSRDAYWEKLYVDQAAG 10 20 30 40 70 80 90 100 110 120 ha0619 TPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWICIQEDTGLLYLNRSLDHSSWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 TPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWICIQEDTGLLYLNRSLDHSSWE 50 60 70 80 90 100 130 140 150 160 170 180 ha0619 KLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 KLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCF 110 120 130 140 150 160 190 200 210 220 230 240 ha0619 PETRPSFRIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTRW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 PETRPSFRIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTRW 170 180 190 200 210 220 250 260 270 280 290 300 ha0619 ALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEFKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 ALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEFKR 230 240 250 260 270 280 310 320 330 340 350 360 ha0619 KEDTVVATLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 KEDTVVATLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSFV 290 300 310 320 330 340 370 380 390 400 410 420 ha0619 RATVHDYRLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 RATVHDYRLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPST 350 360 370 380 390 400 430 440 450 460 470 480 ha0619 YSLSVSRRARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 YSLSVSRRARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFV 410 420 430 440 450 460 490 500 510 520 530 540 ha0619 NDTKALRRPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 NDTKALRRPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRLE 470 480 490 500 510 520 550 560 570 580 590 600 ha0619 CEECGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 CEECGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCLR 530 540 550 560 570 580 610 620 630 640 650 660 ha0619 GSIVGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 GSIVGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSFI 590 600 610 620 630 640 670 680 690 700 710 720 ha0619 VSVLLSAFCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVSVD :::::::::::::::::::::::::::::::::::::::::::.:::::::::::::::: gi|333 VSVLLSAFCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSSARRPSLDSMENQVSVD 650 660 670 680 690 700 730 740 750 760 770 780 ha0619 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 710 720 730 740 750 760 790 800 810 820 830 840 ha0619 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 770 780 790 800 810 820 850 860 870 880 890 900 ha0619 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK 830 840 850 860 870 880 910 920 930 940 950 960 ha0619 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 890 900 910 920 930 940 970 980 990 1000 1010 1020 ha0619 GGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK :::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::: gi|333 GGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYCLMLQCWKQEPDKRPVFADISKDLEK 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 ha0619 MMVKRRDYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYGRISH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|333 MMVKRRDYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYGRISH 1010 1020 1030 1040 1050 1060 ha0619 AFTRF ::::: gi|333 AFTRFL 1070 >>gi|547807|sp|P07949.3|RET_HUMAN RecName: Full=Proto-on (1114 aa) initn: 7226 init1: 7226 opt: 7226 Z-score: 7858.4 bits: 1465.9 E(): 0 Smith-Waterman score: 7226; 100.000% identity (100.000% similar) in 1063 aa overlap (14-1076:1-1063) 10 20 30 40 50 60 ha0619 PQSLQPWPQRARAMAKATSGAAGLRLLLLLLLPLLGKVALGLYFSRDAYWEKLYVDQAAG ::::::::::::::::::::::::::::::::::::::::::::::: gi|547 MAKATSGAAGLRLLLLLLLPLLGKVALGLYFSRDAYWEKLYVDQAAG 10 20 30 40 70 80 90 100 110 120 ha0619 TPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWICIQEDTGLLYLNRSLDHSSWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 TPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWICIQEDTGLLYLNRSLDHSSWE 50 60 70 80 90 100 130 140 150 160 170 180 ha0619 KLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 KLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCF 110 120 130 140 150 160 190 200 210 220 230 240 ha0619 PETRPSFRIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTRW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 PETRPSFRIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTRW 170 180 190 200 210 220 250 260 270 280 290 300 ha0619 ALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEFKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 ALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEFKR 230 240 250 260 270 280 310 320 330 340 350 360 ha0619 KEDTVVATLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 KEDTVVATLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSFV 290 300 310 320 330 340 370 380 390 400 410 420 ha0619 RATVHDYRLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 RATVHDYRLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPST 350 360 370 380 390 400 430 440 450 460 470 480 ha0619 YSLSVSRRARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 YSLSVSRRARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFV 410 420 430 440 450 460 490 500 510 520 530 540 ha0619 NDTKALRRPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 NDTKALRRPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRLE 470 480 490 500 510 520 550 560 570 580 590 600 ha0619 CEECGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 CEECGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCLR 530 540 550 560 570 580 610 620 630 640 650 660 ha0619 GSIVGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 GSIVGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSFI 590 600 610 620 630 640 670 680 690 700 710 720 ha0619 VSVLLSAFCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVSVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 VSVLLSAFCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVSVD 650 660 670 680 690 700 730 740 750 760 770 780 ha0619 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 710 720 730 740 750 760 790 800 810 820 830 840 ha0619 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 770 780 790 800 810 820 850 860 870 880 890 900 ha0619 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK 830 840 850 860 870 880 910 920 930 940 950 960 ha0619 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 890 900 910 920 930 940 970 980 990 1000 1010 1020 ha0619 GGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 GGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 ha0619 MMVKRRDYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYGRISH :::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|547 MMVKRRDYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYGMSDP 1010 1020 1030 1040 1050 1060 ha0619 AFTRF gi|547 NWPGESPVPLTRADGTNTGFPRYPNDSVYANWMLSPSAAKLMDTFDS 1070 1080 1090 1100 1110 >>gi|119606990|gb|EAW86584.1| ret proto-oncogene (multip (1106 aa) initn: 7218 init1: 7218 opt: 7218 Z-score: 7849.8 bits: 1464.2 E(): 0 Smith-Waterman score: 7218; 100.000% identity (100.000% similar) in 1062 aa overlap (14-1075:1-1062) 10 20 30 40 50 60 ha0619 PQSLQPWPQRARAMAKATSGAAGLRLLLLLLLPLLGKVALGLYFSRDAYWEKLYVDQAAG ::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MAKATSGAAGLRLLLLLLLPLLGKVALGLYFSRDAYWEKLYVDQAAG 10 20 30 40 70 80 90 100 110 120 ha0619 TPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWICIQEDTGLLYLNRSLDHSSWE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWICIQEDTGLLYLNRSLDHSSWE 50 60 70 80 90 100 130 140 150 160 170 180 ha0619 KLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCF 110 120 130 140 150 160 190 200 210 220 230 240 ha0619 PETRPSFRIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTRW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PETRPSFRIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTRW 170 180 190 200 210 220 250 260 270 280 290 300 ha0619 ALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEFKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEFKR 230 240 250 260 270 280 310 320 330 340 350 360 ha0619 KEDTVVATLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KEDTVVATLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSFV 290 300 310 320 330 340 370 380 390 400 410 420 ha0619 RATVHDYRLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RATVHDYRLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPST 350 360 370 380 390 400 430 440 450 460 470 480 ha0619 YSLSVSRRARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YSLSVSRRARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFV 410 420 430 440 450 460 490 500 510 520 530 540 ha0619 NDTKALRRPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NDTKALRRPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRLE 470 480 490 500 510 520 550 560 570 580 590 600 ha0619 CEECGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 CEECGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCLR 530 540 550 560 570 580 610 620 630 640 650 660 ha0619 GSIVGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSFI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GSIVGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSFI 590 600 610 620 630 640 670 680 690 700 710 720 ha0619 VSVLLSAFCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVSVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VSVLLSAFCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVSVD 650 660 670 680 690 700 730 740 750 760 770 780 ha0619 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 710 720 730 740 750 760 790 800 810 820 830 840 ha0619 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 770 780 790 800 810 820 850 860 870 880 890 900 ha0619 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK 830 840 850 860 870 880 910 920 930 940 950 960 ha0619 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 890 900 910 920 930 940 970 980 990 1000 1010 1020 ha0619 GGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 950 960 970 980 990 1000 1030 1040 1050 1060 1070 1080 ha0619 MMVKRRDYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYGRISH ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MMVKRRDYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYDAQHS 1010 1020 1030 1040 1050 1060 ha0619 AFTRF gi|119 SSLVGAAFGKSQQLFWLCCQHCNFAEKSRITKTLPALQT 1070 1080 1090 1100 >>gi|5419753|emb|CAB46483.1| RET tyrosine kinase recepto (1091 aa) initn: 7072 init1: 6014 opt: 7074 Z-score: 7693.1 bits: 1435.2 E(): 0 Smith-Waterman score: 7074; 99.904% identity (99.904% similar) in 1040 aa overlap (38-1076:1-1040) 10 20 30 40 50 60 ha0619 PQRARAMAKATSGAAGLRLLLLLLLPLLGKVALGLYFSRDAYWEKLYVDQAAGTPLLYVH :::::::::::::::::::::::::::::: gi|541 VALGLYFSRDAYWEKLYVDQAAGTPLLYVH 10 20 30 70 80 90 100 110 120 ha0619 ALRDAPEEVPSFRLGQHLYGTYRTRLHENNWICIQEDTGLLYLNRSLDHSSWEKLSVRNR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|541 ALRDAPEEVPSFRLGQHLYGTYRTRLHENNWICIQEDTGLLYLNRSLDHSSWEKLSVRNR 40 50 60 70 80 90 130 140 150 160 170 180 ha0619 GFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|541 GFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSF 100 110 120 130 140 150 190 200 210 220 230 240 ha0619 RIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTRWALDREQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|541 RIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTRWALDREQR 160 170 180 190 200 210 250 260 270 280 290 300 ha0619 EKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEFKRKEDTVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|541 EKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEFKRKEDTVVA 220 230 240 250 260 270 310 320 330 340 350 360 ha0619 TLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSFVRATVHDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|541 TLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSFVRATVHDY 280 290 300 310 320 330 370 380 390 400 410 420 ha0619 RLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPSTYSLSVSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|541 RLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPSTYSLSVSR 340 350 360 370 380 390 430 440 450 460 470 480 ha0619 RARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFVNDTKALR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|541 RARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFVNDTKALR 400 410 420 430 440 450 490 500 510 520 530 540 ha0619 RPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRLECEECGGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|541 RPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRLECEECGGL 460 470 480 490 500 510 550 560 570 580 590 600 ha0619 GSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCLRGSIVGGH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|541 GSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCLRGSIVGGH 520 530 540 550 560 570 610 620 630 640 650 660 ha0619 EPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSFIVSVLLSA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|541 EPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSFIVSVLLSA 580 590 600 610 620 630 670 680 690 700 710 720 ha0619 FCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVSVDAFKILED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|541 FCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVSVDAFKILED 640 650 660 670 680 690 730 740 750 760 770 780 ha0619 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|541 PKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLS 700 710 720 730 740 750 790 800 810 820 830 840 ha0619 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|541 EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 760 770 780 790 800 810 850 860 870 880 890 900 ha0619 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|541 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFG 820 830 840 850 860 870 910 920 930 940 950 960 ha0619 LSRDVYEEDSYVKRSQ-GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP :::::::::::::::: ::::::::::::::::::::::::::::::::::::::::::: gi|541 LSRDVYEEDSYVKRSQVGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYP 880 890 900 910 920 930 970 980 990 1000 1010 1020 ha0619 GIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKRR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|541 GIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVKRR 940 950 960 970 980 990 1030 1040 1050 1060 1070 1080 ha0619 DYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYGRISHAFTRF :::::::::::::::::::::::::::::::::::::::::::::::::: gi|541 DYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYGMSDPNWPGES 1000 1010 1020 1030 1040 1050 gi|541 PVPLTRADGTNTGFPRYPNDSVYANWMLSPSAAKLMDTFDS 1060 1070 1080 1090 >>gi|194042652|ref|XP_001926378.1| PREDICTED: ret proto- (1078 aa) initn: 5211 init1: 3255 opt: 6296 Z-score: 6846.5 bits: 1278.6 E(): 0 Smith-Waterman score: 6296; 86.585% identity (94.747% similar) in 1066 aa overlap (23-1085:14-1078) 10 20 30 40 50 60 ha0619 PQSLQPWPQRARAMAKATSGAAGLRLLLLLLLPLLGKVALGLYFSRDAYWEKLYVDQAAG :......... : . :::::::::::::::::: :: gi|194 MVVTMVMVAMVGGGVKVMVVMMIEG-GDAPLGLYFSRDAYWEKLYVDQPAG 10 20 30 40 50 70 80 90 100 110 120 ha0619 TPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWICIQEDTGLLYLNRSLDHSSWE ::::::::.:.: :::::::::::::.::::::::.:: :::::::::::.:::::::: gi|194 MPLLYVHALQDVPGEVPSFRLGQHLYGVYRTRLHENDWIRIQEDTGLLYLNQSLDHSSWE 60 70 80 90 100 110 130 140 150 160 170 180 ha0619 KLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCF :::.:: :::::::::.:::::.::::.::::::::::::::.:.:::::..::::.::: gi|194 KLSIRNGGFPLLTVYLQVFLSPASLRESECQWPGCARVYFSFINASFPACGALKPRDLCF 120 130 140 150 160 170 190 200 210 220 230 240 ha0619 PETRPSFRIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTRW ::. :::::::::::::::::::::::::::.:::: :: ::. ::::: ::::::::: gi|194 PEASLSFRIRENRPPGTFHQFRLLPVQFLCPNVSVAYSLLGGESQPFRCAADSLEVSTRW 180 190 200 210 220 230 250 260 270 280 290 300 ha0619 ALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEFKR ::::::::::::::.:::..::::: :::::::::::::: :::: .:.::::::::::: gi|194 ALDREQREKYELVAACTVRVGAREEEVMVPFPVTVYDEDDCAPTFLGGIDTASAVVEFKR 240 250 260 270 280 290 310 320 330 340 350 360 ha0619 KEDTVVATLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSFV :: ::::::::::::::::::::.::::.::: :::: ::::::: :::: .:.::::: gi|194 KEGTVVATLRVFDADVVPASGELLRRYTNTLLSRDTWALQTFRVEHLPNETLAQVNGSFV 300 310 320 330 340 350 370 380 390 400 410 420 ha0619 RATVHDYRLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPST :::.:::::::::.::: :::..::::::::::::::: ::::::::::::::::::::. gi|194 RATIHDYRLVLNRSLSILENRAVQLAVLVNDSDFQGPGEGVLLLHFNVSVLPVSLHLPSA 360 370 380 390 400 410 430 440 450 460 470 480 ha0619 YSLSVSRRARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILFV ::..:::::.:::::::::::::: ::::.:::::. :.::::.::.:::::::.: ::: gi|194 YSFAVSRRAHRFAQIGKVCVENCQEFSGIHVQYKLQLSNANCSALGIVTSAEDTTGTLFV 420 430 440 450 460 470 490 500 510 520 530 540 ha0619 NDTKALRRPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRLE :::.::.: .::.:.: :::.:. : ::.::.:::::::.::::: :::::::::::. : gi|194 NDTEALQRSECAQLEYKVVAVDRLTRRQTQASLLVTVEGTYVAEEPGCPLSCAVSKRQPE 480 490 500 510 520 530 550 560 570 580 590 600 ha0619 CEECGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCLR ::::::::: .::::::::::::::::::::::: :::::::::.::..: .:::::::: gi|194 CEECGGLGSLNGRCEWRQGDGKGITRNFSTCSPSIKTCPDGHCDAVESKDAHICPQDCLR 540 550 560 570 580 590 610 620 630 640 650 ha0619 G-SIVGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSF : ::.::::::: ::::::.: :::::::.:::::::: ::::::::::::::::::::: gi|194 GGSIIGGHEPGERRGIKAGFGICNCFPEEKKCFCEPEDNQDPLCDELCRTVIAAAVLFSF 600 610 620 630 640 650 660 670 680 690 700 710 ha0619 IVSVLLSAFCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVSV :::::::.:::: ::: ::::::.:::::::::::::::::::::::::::::::: ::: gi|194 IVSVLLSTFCIHRYHKNAHKPPIASAEMTFRRPAQAFPVSYSSSGARRPSLDSMENPVSV 660 670 680 690 700 710 720 730 740 750 760 770 ha0619 DAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP ::::: ::::::::::::::::::::::::::::::::.:::.::::::::::::::::: gi|194 DAFKIPEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENASP 720 730 740 750 760 770 780 790 800 810 820 830 ha0619 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY :::::::::::.:::::::.:::::::::::::::::::::::::::::::::::.:::: gi|194 SELRDLLSEFNLLKQVNHPQVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKAGPGY 780 790 800 810 820 830 840 850 860 870 880 890 ha0619 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR .::::::.:: ::.:.:::::::::::::::::.:::::::::::::::::::.:::::: gi|194 VGSGGSRHSSYLDNPEERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGR 840 850 860 870 880 890 900 910 920 930 940 950 ha0619 KMKISDFGLSRDVYEEDSYVKRS--QGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI .:::::::: :::::::::: ::::::::::::::::::::::::::::::::::: gi|194 RMKISDFGLFPRCYEEDSYVKRSKYQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEI 900 910 920 930 940 950 960 970 980 990 1000 1010 ha0619 VTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD :::::::::::::::::::::::.::::::::::::: :::::::::::::::::::::: gi|194 VTLGGNPYPGIPPERLFNLLKTGYRMERPDNCSEEMYSLMLQCWKQEPDKRPVFADISKD 960 970 980 990 1000 1010 1020 1030 1040 1050 1060 1070 ha0619 LEKMMVKRRDYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYGR :.::::: :::::::::::::::.::::::::::::::::::::::.::::::::::::: gi|194 LDKMMVKSRDYLDLAASTPSDSLLYDDGLSEEETPLVDCNNAPLPRTLPSTWIENKLYGR 1020 1030 1040 1050 1060 1070 1080 ha0619 ISHAFTRF :::::::: gi|194 ISHAFTRF >>gi|73998093|ref|XP_543915.2| PREDICTED: similar to ret (1108 aa) initn: 5228 init1: 4932 opt: 6292 Z-score: 6842.0 bits: 1277.8 E(): 0 Smith-Waterman score: 6292; 86.755% identity (95.459% similar) in 1057 aa overlap (22-1076:2-1057) 10 20 30 40 50 60 ha0619 PQSLQPWPQRARAMAKATSGAAGLRLLLLLLLPLLGKVALGLYFSRDAYWEKLYVDQAAG :. :.. ..:. .. :::::::::::::::::: .: gi|739 MAASRIIKGWFVPFC-QAPLGLYFSRDAYWEKLYVDQPSG 10 20 30 70 80 90 100 110 ha0619 TPLLYVHALRDAPEEVPSFRLGQHLYG-TYRTRLHENNWICIQEDTGLLYLNRSLDHSSW :::::::::: ::::::::::::::: .::.:::::.:: :.:::::::::::::::.: gi|739 MPLLYVHALRDIPEEVPSFRLGQHLYGIAYRARLHENDWIRIEEDTGLLYLNRSLDHSTW 40 50 60 70 80 90 120 130 140 150 160 170 ha0619 EKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELC ::::.:: :::.::.:..:::: .:::::::::::::::::::.:::::::.:::::::: gi|739 EKLSIRNGGFPVLTIYVQVFLSSASLREGECQWPGCARVYFSFINTSFPACGSLKPRELC 100 110 120 130 140 150 180 190 200 210 220 230 ha0619 FPETRPSFRIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTR :::: ::::::::::::::::::::.:::::::::.:.:::::.::::::::::::::: gi|739 FPETGVSFRIRENRPPGTFHQFRLLPMQFLCPNISVSYKLLEGENLPFRCAPDSLEVSTR 160 170 180 190 200 210 240 250 260 270 280 290 ha0619 WALDREQREKYELVAVCTVHAGAR-EEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEF :::::: ::::::::.:::..::: :::::::::::::::::::::: .: ::::::::: gi|739 WALDRELREKYELVAACTVRVGARKEEVVMVPFPVTVYDEDDSAPTFLGGFDTASAVVEF 220 230 240 250 260 270 300 310 320 330 340 350 ha0619 KRKEDTVVATLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGS :::: :::::..:::::::::::::.:::::::::::.:: ::::::: :::: :::::: gi|739 KRKEGTVVATIHVFDADVVPASGELLRRYTSTLLPGDAWALQTFRVEHSPNETLVQANGS 280 290 300 310 320 330 360 370 380 390 400 410 ha0619 FVRATVHDYRLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLP :::::::::::::::.: :::.:..::::::::::::::: :.:::::::.::::::::: gi|739 FVRATVHDYRLVLNRSLPISESRSLQLAVLVNDSDFQGPGEGILLLHFNVTVLPVSLHLP 340 350 360 370 380 390 420 430 440 450 460 470 ha0619 STYSLSVSRRARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGIL :.:...:::::::::::::::::::: ::::.:::::. :..:::.::::::::::.: : gi|739 SAYTFTVSRRARRFAQIGKVCVENCQEFSGIHVQYKLQLSSTNCSVLGVVTSAEDTTGTL 400 410 420 430 440 450 480 490 500 510 520 530 ha0619 FVNDTKALRRPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRR .::::.::.: :..:.: :::.:. : ::.:: :.:::::.::::: :::::::::::: gi|739 YVNDTEALQRLDCSQLQYTVVAADRPTRRQTQAPLVVTVEGTYVAEEPGCPLSCAVSKRR 460 470 480 490 500 510 540 550 560 570 580 590 ha0619 LECEECGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDC :::::::::: ::.::::::::::::::::::::..:::::::::.::....::::::: gi|739 PECEECGGLGSLTGKCEWRQGDGKGITRNFSTCSPNVKTCPDGHCDAVESRNVNICPQDC 520 530 540 550 560 570 600 610 620 630 640 650 ha0619 LRGSIVGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFS :::::.::::::. :::::.: :::::::.:::::::: :::::::::::::::::::: gi|739 LRGSIIGGHEPGDRWGIKAGFGICNCFPEEKKCFCEPEDSQDPLCDELCRTVIAAAVLFS 580 590 600 610 620 630 660 670 680 690 700 710 ha0619 FIVSVLLSAFCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVS ::::.:::.:::: ::: ::::::.::::::::::::::::::::::::::::::::::: gi|739 FIVSMLLSTFCIHRYHKNAHKPPIASAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVS 640 650 660 670 680 690 720 730 740 750 760 770 ha0619 VDAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS :::::: ::::::::::::::::::::::::::::::::.:::.:::::::::::::::: gi|739 VDAFKIPEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAVKMLKENAS 700 710 720 730 740 750 780 790 800 810 820 830 ha0619 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPG ::::::::::::.::::::::::::::::::::::.::::::::::::::::::::.::: gi|739 PSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLFLIVEYAKYGSLRGFLRESRKAGPG 760 770 780 790 800 810 840 850 860 870 880 890 ha0619 YLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEG :.::::::.:: ::.:.:::::::::::::::::.::.::::::::::::::::.::::: gi|739 YVGSGGSRSSSYLDNPEERALTMGDLISFAWQISRGMRYLAEMKLVHRDLAARNVLVAEG 820 830 840 850 860 870 900 910 920 930 940 950 ha0619 RKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|739 RKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 880 890 900 910 920 930 960 970 980 990 1000 1010 ha0619 TLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL ::::::::::::::::::::::.::::::::::::: ::::::::::::::::::::::: gi|739 TLGGNPYPGIPPERLFNLLKTGYRMERPDNCSEEMYGLMLQCWKQEPDKRPVFADISKDL 940 950 960 970 980 990 1020 1030 1040 1050 1060 1070 ha0619 EKMMVKRRDYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYGRI :::::: :::::::::::::::.::::::::::::::::::::::.:::::::::::: gi|739 EKMMVKNRDYLDLAASTPSDSLLYDDGLSEEETPLVDCNNAPLPRTLPSTWIENKLYGMS 1000 1010 1020 1030 1040 1050 1080 ha0619 SHAFTRF gi|739 DPNWPEESPVPLTRADGTNSVCPRYANDSVYANWMVSPSAAQLMDAFDS 1060 1070 1080 1090 1100 >>gi|149049627|gb|EDM02081.1| ret proto-oncogene, isofor (1073 aa) initn: 6266 init1: 4933 opt: 6266 Z-score: 6813.9 bits: 1272.5 E(): 0 Smith-Waterman score: 6266; 84.995% identity (94.408% similar) in 1073 aa overlap (14-1085:1-1073) 10 20 30 40 50 60 ha0619 PQSLQPWPQRARAMAKATSGAAGLRLLLLLLLPLLGKVALGLYFSRDAYWEKLYVDQAAG :::: :::::: : :.:::::::.. ::::::::::::.::::: :: gi|149 MAKARSGAAGLGLKLFLLLPLLGEAPLGLYFSRDAYWERLYVDQPAG 10 20 30 40 70 80 90 100 110 120 ha0619 TPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWICIQEDTGLLYLNRSLDHSSWE ::::::::::::: :::::::::.:::.::::::::.:: :. :::::::.:::::::: gi|149 TPLLYVHALRDAPGEVPSFRLGQYLYGVYRTRLHENDWIHIDSGTGLLYLNQSLDHSSWE 50 60 70 80 90 100 130 140 150 160 170 180 ha0619 KLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCF .::.:: :::::::.:.:::. :. :::::.:::::::::::.: .:: :::.: :.:: gi|149 QLSIRNGGFPLLTVFLQVFLGSTAQREGECHWPGCARVYFSFINDTFPNCSSFKARDLCT 110 120 130 140 150 160 190 200 210 220 230 240 ha0619 PETRPSFRIRENRPPGTFHQFRLLPVQFLCPNISVAYRLLEGEGLPFRCAPDSLEVSTRW ::: :::::::::::::.:::.:::::::::::: :.::::.:::::: :: ::::::: gi|149 PETGVSFRIRENRPPGTFYQFRMLPVQFLCPNISVKYKLLEGDGLPFRCDPDCLEVSTRW 170 180 190 200 210 220 250 260 270 280 290 ha0619 ALDREQREKYELVAVCTVHA-GAREEVVMVPFPVTVYDEDDSAPTFPAGVDTASAVVEFK ::::: .::: : : :.: . :: .: : : ::::::::::: ::: .:: ::::::::: gi|149 ALDRELQEKYVLEAECAVAGPGANKEKVAVSFPVTVYDEDDSPPTFSGGVGTASAVVEFK 230 240 250 260 270 280 300 310 320 330 340 350 ha0619 RKEDTVVATLRVFDADVVPASGELVRRYTSTLLPGDTWAQQTFRVEHWPNETSVQANGSF ::: ::::::.:::::::::::::::::::::: ::.:::::::::: :::: ::.:.. gi|149 RKEGTVVATLQVFDADVVPASGELVRRYTSTLLSGDSWAQQTFRVEHTPNETLVQSNNNS 290 300 310 320 330 340 360 370 380 390 400 410 ha0619 VRATVHDYRLVLNRNLSISENRTMQLAVLVNDSDFQGPGAGVLLLHFNVSVLPVSLHLPS ::::.:.:.:::::.:::::.:..::.::::::::::::.:::.::::::::::.:.:: gi|149 VRATMHNYKLVLNRSLSISESRVLQLVVLVNDSDFQGPGSGVLFLHFNVSVLPVTLNLPM 350 360 370 380 390 400 420 430 440 450 460 470 ha0619 TYSLSVSRRARRFAQIGKVCVENCQAFSGINVQYKLHSSGANCSTLGVVTSAEDTSGILF .::. :.:::::.:::::::::::: :::...::::. :..:::.::::::.::::: :. gi|149 AYSFPVNRRARRYAQIGKVCVENCQEFSGVSIQYKLQPSSTNCSALGVVTSTEDTSGTLY 410 420 430 440 450 460 480 490 500 510 520 530 ha0619 VNDTKALRRPKCAELHYMVVATDQQTSRQAQAQLLVTVEGSYVAEEAGCPLSCAVSKRRL ::::.:::::.:.::.: :::::.:: ::.::.:.:::::.:.:::.::: ::::.::: gi|149 VNDTEALRRPECTELQYTVVATDRQTRRQTQASLVVTVEGTYIAEEVGCPKSCAVNKRRP 470 480 490 500 510 520 540 550 560 570 580 590 ha0619 ECEECGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTKTCPDGHCDVVETQDINICPQDCL ::::::::::::::::::::::::::::::::::::.::::::::..:..:::::::::: gi|149 ECEECGGLGSPTGRCEWRQGDGKGITRNFSTCSPSTRTCPDGHCDALESRDINICPQDCL 530 540 550 560 570 580 600 610 620 630 640 650 ha0619 RGSIVGGHEPGEPRGIKAGYGTCNCFPEEEKCFCEPEDIQDPLCDELCRTVIAAAVLFSF :: :::::: :: .::::::: :::::.:.:::::::: : :::::::::::.::::::: gi|149 RGPIVGGHERGERQGIKAGYGICNCFPDEKKCFCEPEDSQGPLCDELCRTVITAAVLFSF 590 600 610 620 630 640 660 670 680 690 700 710 ha0619 IVSVLLSAFCIHCYHKFAHKPPISSAEMTFRRPAQAFPVSYSSSGARRPSLDSMENQVSV :.:::::.:::: ::: ::::::.:::::: ::::.::.::::::.:::::::::::::: gi|149 IISVLLSTFCIHRYHKHAHKPPIASAEMTFCRPAQGFPISYSSSGTRRPSLDSMENQVSV 650 660 670 680 690 700 720 730 740 750 760 770 ha0619 DAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASP :.::: ::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|149 DSFKIPEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASQ 710 720 730 740 750 760 780 790 800 810 820 830 ha0619 SELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGY :::::::::::.:::::::::::::::::::::::::::::::::::::::.:::.::.: gi|149 SELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRDSRKIGPAY 770 780 790 800 810 820 840 850 860 870 880 890 ha0619 LGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGR ..::::::::::::::::.::::::::::::::.:::::::::::::::::::::::::: gi|149 VSSGGSRNSSSLDHPDERVLTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNILVAEGR 830 840 850 860 870 880 900 910 920 930 940 950 ha0619 KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT :::::::::::::::::::::.:.:::::::::::::::::::::::::::::::::::: gi|149 KMKISDFGLSRDVYEEDSYVKKSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 890 900 910 920 930 940 960 970 980 990 1000 1010 ha0619 LGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 950 960 970 980 990 1000 1020 1030 1040 1050 1060 1070 ha0619 KMMVKRRDYLDLAASTPSDSLIYDDGLSEEETPLVDCNNAPLPRALPSTWIENKLYGRIS ::::: :::::::::::::::.::::::::::::::::.:::::.::::::::::::::: gi|149 KMMVKSRDYLDLAASTPSDSLLYDDGLSEEETPLVDCNSAPLPRSLPSTWIENKLYGRIS 1010 1020 1030 1040 1050 1060 1080 ha0619 HAFTRF :::::: gi|149 HAFTRF 1070 1085 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Thu Jun 18 14:26:43 2009 done: Thu Jun 18 14:29:32 2009 Total Scan time: 1448.850 Total Display time: 0.740 Function used was FASTA [version 34.26.5 April 26, 2007]