hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-14293337/chunk_1/iprscan-20090618-14293337.nocrc
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Query sequence: ha06190
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00219                                                 509.6   1.4e-148   1
SM00220                                                 165.5    5.1e-45   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00219    1/1     737  1018 ..     1   280 []   509.6 1.4e-148
SM00220    1/1     737  1022 ..     1   231 []   165.5  5.1e-45

Alignments of top-scoring domains:
SM00219: domain 1 of 1, from 737 to 1018: score 509.6, E = 1.4e-148
                   *->ltlgkkLGeGaFGeVykGtlk........ieVAVKtLkeda....ke
                      l+lgk+LGeG+FG+V+k+t+ + +++ + ++VAVK+Lke+a++++++
     ha06190   737    LVLGKTLGEGEFGKVVKATAFhlkgragyTTVAVKMLKENAspseLR 783  

                   eFlrEakiMkklGgkHpNiVkLlGvcteegrrFmevePlmivmEymegGd
                   ++l+E +++k++  +Hp+++kL+G+c+++       +Pl++++Ey+++G+
     ha06190   784 DLLSEFNVLKQV--NHPHVIKLYGACSQD-------GPLLLIVEYAKYGS 824  

                   LldyLrknrpk.......................lslsdLlsfAlQIAkG
                   L+ +Lr++r+ +++  ++++++++++ ++++++ l++ dL+sfA+QI++G
     ha06190   825 LRGFLRESRKVgpgylgsggsrnsssldhpderaLTMGDLISFAWQISQG 874  

                   MeYLesknfvHRDLAARNcLvgenkvvKIsDFGLsRdlyddDkkGeskdy
                   M+YL+++++vHRDLAARN+Lv+e++ +KIsDFGLsRd+y++       d 
     ha06190   875 MQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE-------DS 917  

                   YrkkggkggktllPirWmAPEslkdgkFtskSDVWSFGVlLWEiftlGeq
                   Y+k++  +g+  +P++WmA+Esl+d+++t++SDVWSFGVlLWEi tlG+ 
     ha06190   918 YVKRS--QGR--IPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 963  

                   PYpgeiqqfmsneevleylkkGyRlpkPendlpiSsvtCPdelYdlMlqC
                   PYpg     +++e+++++lk+G+R+++P+n        C++e+Y+lMlqC
     ha06190   964 PYPG-----IPPERLFNLLKTGHRMERPDN--------CSEEMYRLMLQC 1000 

                   WaedPedRPtFselverl<-*
                   W+ +P++RP F+++ ++l   
     ha06190  1001 WKQEPDKRPVFADISKDL    1018 

SM00220: domain 1 of 1, from 737 to 1022: score 165.5, E = 5.1e-45
                   *->YellkklGkGaFGkVylardkk.....tgrlvAiKvik........e
                        l+k+lG+G FGkV +a+  + +++     vA+K++k++ ++++ +
     ha06190   737    LVLGKTLGEGEFGKVVKATAFHlkgraGYTTVAVKMLKenaspselR 783  

                   rilrEikiLkk.dHPNIVkLydvfed.dklylVmEyceGdlGdLfdllkk
                   ++l+E ++Lk+ +HP+++kLy+++  ++ l l+ Ey+    G+L+ +l++
     ha06190   784 DLLSEFNVLKQvNHPHVIKLYGACSQdGPLLLIVEYAKY--GSLRGFLRE 831  

                   rgrrglr..................kvlsE.earfyfrQilsaLeYLHsq
                    ++ g++  ++++++++++ ++++++ l+ ++  ++++Qi ++++YL ++
     ha06190   832 SRKVGPGylgsggsrnsssldhpdeRALTMgDLISFAWQISQGMQYLAEM 881  

                   gIiHRDLKPeNiLLds..hvKlaDFGlArql.........ttfvGTpeYm
                   + +HRDL   NiL+ +++  K++DFGl+r + ++++  +++       +m
     ha06190   882 KLVHRDLAARNILVAEgrKMKISDFGLSRDVyeedsyvkrSQGRIPVKWM 931  

                   APEvl...gYgkpavDiWSlGcilyEllt.GkpPFp..qldlifkkig..
                   A E l ++ Y++  +D+WS+G++l+E +t G  P+p+  ++++f++++++
     ha06190   932 AIESLfdhIYTT-QSDVWSFGVLLWEIVTlGGNPYPgiPPERLFNLLKtg 980  

                   .........SpeakdLikklLvkdPekRlta.eaLedeldikaHPff<-*
                   ++ +++++ S+e+  L+ ++++ +P+kR+   ++ +      +   +   
     ha06190   981 hrmerpdncSEEMYRLMLQCWKQEPDKRPVFaDISK-----DLEKMM    1022 

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