hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-16042656/chunk_1/iprscan-20090525-16042656.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: ha06270s1
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00326                                                  82.3      6e-20   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00326    1/1      78   136 ..     1    58 []    82.3    6e-20

Alignments of top-scoring domains:
SM00326: domain 1 of 1, from 78 to 136: score 82.3, E = 6e-20
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleks...ddgWweGelnrtG
                      + ++AlYD  a+++dELsF+kGDi+tvle+++++ dgWw + l+  G
   ha06270s1    78    VLAKALYDNVAESPDELSFRKGDIMTVLEQDtqgLDGWWLCSLH--G 122  

                   keGlfPsnYVeeie<-*
                   ++G++P+n ++++    
   ha06270s1   123 RQGIVPGNRLKILV    136  

//