hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080811/iprscan-20080811-23412009/chunk_1/iprscan-20080811-23412009.nocrc
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Query sequence: ha06684
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00503.10.ls G-protein alpha subunit                        832.3   2.4e-247   1
PF00503.10.fs G-protein alpha subunit                        830.4   8.7e-247   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00503.10.fs   1/1     110   457 ..     1   361 []   830.4 8.7e-247
PF00503.10.ls   1/1     110   457 ..     1   361 []   832.3 2.4e-247

Alignments of top-scoring domains:
PF00503.10.fs: domain 1 of 1, from 110 to 457: score 830.4, E = 8.7e-247
                   *->seeekeqakrnkeIekqLkqekkkakrevKLLLLGAGESGKSTIlKQ
                      s+e+k++ +r+k I++ L+++++ka+revKLLLLGAGESGKSTI+KQ
     ha06684   110    SAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQ 156  

                   MKIIHgnGFSqEEkkeyrpvIyqNivqsmrvlvdAmetLgIpfgdperen
                   MKIIH+ G+S+EE+k+y+ v+y+N++qs+ ++++Am++L+I+fgd++r  
     ha06684   157 MKIIHEAGYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSAR-- 204  

                   SeadavmiietaseteeeeplpkeyadaikaLWkDpGiqecfdRsnEfqL
                     +da +++ +a+ +e e+ +++e+a  ik+LWkD+G+q+cf+Rs+E+qL
     ha06684   205 -ADDARQLFVLAGAAE-EGFMTAELAGVIKRLWKDSGVQACFNRSREYQL 252  

                   nDSAkYFLdnldRisdpdYiPTeQDILrsRvkTTGIvEtkFsvkkltFRM
                   nDSA+Y+L++ldRi++p+YiPT+QD+Lr+RvkTTGIvEt+F++k+l+F+M
     ha06684   253 NDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKM 302  

                   fDVGGQRSERKKWIHCFEdVTAIIFlVALSEYDQvLfEDettNRMqESLk
                   fDVGGQRSERKKWIHCFE+VTAIIF+VALS+YD+vL+EDe++NRM+ES+k
     ha06684   303 FDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMK 352  

                   LFdsIcNnrwFvntSiILFLNKkDLFeEKIkktpshisdyFPeYedyssG
                   LFdsIcNn+wF +tSiILFLNKkDLFeEKIkk+p  +++++PeY+    G
     ha06684   353 LFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSP--LTICYPEYA----G 396  

                   ppqdyeaAkeFIkkkFvslnrnnekpkKeIYsHfTCATDTnnIrfVFdaV
                     ++ye+A+++I+ +F++ln+++++  KeIY+HfTCATDT+n++fVFdaV
     ha06684   397 S-NTYEEAAAYIQCQFEDLNKRKDT--KEIYTHFTCATDTKNVQFVFDAV 443  

                   kDiIlqenLkecGL<-*
                   +D+I+++nLk+cGL   
     ha06684   444 TDVIIKNNLKDCGL    457  

PF00503.10.ls: domain 1 of 1, from 110 to 457: score 832.3, E = 2.4e-247
                   *->seeekeqakrnkeIekqLkqekkkakrevKLLLLGAGESGKSTIlKQ
                      s+e+k++ +r+k I++ L+++++ka+revKLLLLGAGESGKSTI+KQ
     ha06684   110    SAEDKAAVERSKMIDRNLREDGEKAAREVKLLLLGAGESGKSTIVKQ 156  

                   MKIIHgnGFSqEEkkeyrpvIyqNivqsmrvlvdAmetLgIpfgdperen
                   MKIIH+ G+S+EE+k+y+ v+y+N++qs+ ++++Am++L+I+fgd++r  
     ha06684   157 MKIIHEAGYSEEECKQYKAVVYSNTIQSIIAIIRAMGRLKIDFGDSAR-- 204  

                   SeadavmiietaseteeeeplpkeyadaikaLWkDpGiqecfdRsnEfqL
                     +da +++ +a+ +e e+ +++e+a  ik+LWkD+G+q+cf+Rs+E+qL
     ha06684   205 -ADDARQLFVLAGAAE-EGFMTAELAGVIKRLWKDSGVQACFNRSREYQL 252  

                   nDSAkYFLdnldRisdpdYiPTeQDILrsRvkTTGIvEtkFsvkkltFRM
                   nDSA+Y+L++ldRi++p+YiPT+QD+Lr+RvkTTGIvEt+F++k+l+F+M
     ha06684   253 NDSAAYYLNDLDRIAQPNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKM 302  

                   fDVGGQRSERKKWIHCFEdVTAIIFlVALSEYDQvLfEDettNRMqESLk
                   fDVGGQRSERKKWIHCFE+VTAIIF+VALS+YD+vL+EDe++NRM+ES+k
     ha06684   303 FDVGGQRSERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEEMNRMHESMK 352  

                   LFdsIcNnrwFvntSiILFLNKkDLFeEKIkktpshisdyFPeYedyssG
                   LFdsIcNn+wF +tSiILFLNKkDLFeEKIkk+p  +++++PeY+    G
     ha06684   353 LFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSP--LTICYPEYA----G 396  

                   ppqdyeaAkeFIkkkFvslnrnnekpkKeIYsHfTCATDTnnIrfVFdaV
                     ++ye+A+++I+ +F++ln+++++  KeIY+HfTCATDT+n++fVFdaV
     ha06684   397 S-NTYEEAAAYIQCQFEDLNKRKDT--KEIYTHFTCATDTKNVQFVFDAV 443  

                   kDiIlqenLkecGL<-*
                   +D+I+++nLk+cGL   
     ha06684   444 TDVIIKNNLKDCGL    457  

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