hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-16240874/chunk_1/iprscan-20090525-16240874.nocrc
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Query sequence: ha06911
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
TIGR00175    mito_nad_idh: isocitrate dehydrogenase,    875.5     8e-261   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
TIGR00175      1/1      33   366 ..     1   348 []   875.5   8e-261

Alignments of top-scoring domains:
TIGR00175: domain 1 of 1, from 33 to 366: score 875.5, E = 8e-261
                   *->GGkyTVTlIPGDGIGPEisgaVkeIFkaanvPIdFEeidVsaietdg
                      GG++TVTlIPGDGIGPEis+aV++IF+aa++PI++Ee++V+ai+++g
     ha06911    33    GGVQTVTLIPGDGIGPEISAAVMKIFDAAKAPIQWEERNVTAIQGPG 79   

                   kkseipdeAveSIGrrNkVaLKGnleESATpigkGPghkSlNvaLRKeLD
                   +k++ip+eA+eS+ ++Nk++LKG+l+   Tpi++G  h+S+N++LRK++D
     ha06911    80 GKWMIPSEAKESM-DKNKMGLKGPLK---TPIAAG--HPSMNLLLRKTFD 123  

                   LYANVvhcKSlpGiKTRHGedvDiViIRENTEGEYSGLEHesVPGVVESL
                   LYANV++c+S++G+KT++ +dv+iV+IRENTEGEYSG+EH++V+GVV+S+
     ha06911   124 LYANVRPCVSIEGYKTPY-TDVNIVTIRENTEGEYSGIEHVIVDGVVQSI 172  

                   KviTrekSeRIAryAFeyArkngRKkVTAVHKANIMKLaDGLFLevcrEV
                   K+iT+++S+RIA++AFeyAr+n+R++VTAVHKANIM+++DGLFL++crEV
     ha06911   173 KLITEGASKRIAEFAFEYARNNHRSNVTAVHKANIMRMSDGLFLQKCREV 222  

                   AkkEYPdItfeemIvDNtcMQlVSrPeQFDDAVmVMPNLYGnIlsNlaAG
                   A++ ++dI+f+em++D++c+++V++P+QFD  V+VMPNLYG+Ils+l+AG
     ha06911   223 AES-CKDIKFNEMYLDTVCLNMVQDPSQFD--VLVMPNLYGDILSDLCAG 269  

                   LvGGpGlvPGaNvGrdYavFEpGtRhtglGNEdIaGkniANPTAliLSSv
                   L+GG+G++P++N+G++++++++++++t++   dIaGk++ANPTAl+LS+v
     ha06911   270 LIGGLGVTPSGNIGANGVAIFESVHGTAP---DIAGKDMANPTALLLSAV 316  

                   mMLnHLgLkeyAdrIrkAVlatIaeGPkvrTkDLGGnatTsDfteavIkr
                   mML+H+gL+++A+rI++A++atI++G k++TkDLGGna++sDfte++++r
     ha06911   317 MMLRHMGLFDHAARIEAACFATIKDG-KSLTKDLGGNAKCSDFTEEICRR 365  

                   l<-*
                   +   
     ha06911   366 V    366  

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