hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-00101902/chunk_1/iprscan-20080812-00101902.nocrc
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Query sequence: he00358
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF08697.1.ls Tuftelin interacting protein 11                502.0   6.5e-148   1
PF08697.1.fs Tuftelin interacting protein 11                500.1   2.4e-147   1
PF01585.13.fs G-patch domain                                  71.9    4.7e-20   1
PF01585.13.ls G-patch domain                                  73.9    4.7e-19   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01585.13.fs   1/1     151   195 ..     1    45 []    71.9  4.7e-20
PF01585.13.ls   1/1     151   195 ..     1    45 []    73.9  4.7e-19
PF08697.1.fs   1/1     394   628 ..     1   276 []   500.1 2.4e-147
PF08697.1.ls   1/1     394   628 ..     1   276 []   502.0 6.5e-148

Alignments of top-scoring domains:
PF01585.13.fs: domain 1 of 1, from 151 to 195: score 71.9, E = 4.7e-20
                   *->tsniGfklLqKMGWkeGqGLGkneqGikePieakikpdrkGLGae<-
                      t++iG+klLqKMG+ +G+GLGkn qGi++Pieak++++++ +Ga+  
     he00358   151    TKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAY   195  

                   *
                    
     he00358     -   -    

PF01585.13.ls: domain 1 of 1, from 151 to 195: score 73.9, E = 4.7e-19
                   *->tsniGfklLqKMGWkeGqGLGkneqGikePieakikpdrkGLGae<-
                      t++iG+klLqKMG+ +G+GLGkn qGi++Pieak++++++ +Ga+  
     he00358   151    TKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAY   195  

                   *
                    
     he00358     -   -    

PF08697.1.fs: domain 1 of 1, from 394 to 628: score 500.1, E = 2.4e-147
                   *->sgtlsLeelaklFeeLqskYpeEykefeLadlAvaavhPLLrealqP
                      s++l+L+e+a++Fe Lq+kY+eEy+++   dlAva+v+PL++e+++ 
     he00358   394    SNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFK- 439  

                   qDeWdPLedPtnyglelissWrkAYNLPELLqedqsasqssqrgkkaavD
                     eWdPL+d+t yg+e+is+W++      LL++dq +s+ +q+       
     he00358   440 --EWDPLKDCT-YGTEIISKWKS------LLENDQLLSHGGQD------- 473  

                   riDiggeHHasmtPYesLiwelwLPsvRsavnqWdPrdpePMislleaWe
                             s++++++Liwe+w+P+vR++v qW+Pr+++PM+++l++W 
     he00358   474 ---------LSADAFHRLIWEVWMPFVRNIVTQWQPRNCDPMVDFLDSWV 514  

                   pLLPsfildniiLeqlVlPKLkaaVeeWdPktSrnkrsqdtvPihsWvfP
                   +++P++ildn iL+ql++PKL+++Ve+W+P+t       dtvPihsW++P
     he00358   515 HIIPVWILDN-ILDQLIFPKLQKEVENWNPLT-------DTVPIHSWIHP 556  

                   WLplLGsrledPkstglypdIRrKLrraLdvWhpsDrSayaiLspWKdVF
                   WLpl++ rle     +ly++IR+KL++aL++WhpsD+Sa++iL+pWKdVF
     he00358   557 WLPLMQARLE-----PLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVF 601  

                   dsesWdalVlrrhIvPKLglaLreeftiN<-*
                   +++sW+a+ ++++IvPKLg++L+ e++iN   
     he00358   602 TPGSWEAF-MVKNIVPKLGMCLG-ELVIN    628  

PF08697.1.ls: domain 1 of 1, from 394 to 628: score 502.0, E = 6.5e-148
                   *->sgtlsLeelaklFeeLqskYpeEykefeLadlAvaavhPLLrealqP
                      s++l+L+e+a++Fe Lq+kY+eEy+++   dlAva+v+PL++e+++ 
     he00358   394    SNPLTLDECARIFETLQDKYYEEYRMSDRVDLAVAIVYPLMKEYFK- 439  

                   qDeWdPLedPtnyglelissWrkAYNLPELLqedqsasqssqrgkkaavD
                     eWdPL+d+t yg+e+is+W++      LL++dq +s+ +q+       
     he00358   440 --EWDPLKDCT-YGTEIISKWKS------LLENDQLLSHGGQD------- 473  

                   riDiggeHHasmtPYesLiwelwLPsvRsavnqWdPrdpePMislleaWe
                             s++++++Liwe+w+P+vR++v qW+Pr+++PM+++l++W 
     he00358   474 ---------LSADAFHRLIWEVWMPFVRNIVTQWQPRNCDPMVDFLDSWV 514  

                   pLLPsfildniiLeqlVlPKLkaaVeeWdPktSrnkrsqdtvPihsWvfP
                   +++P++ildn iL+ql++PKL+++Ve+W+P+t       dtvPihsW++P
     he00358   515 HIIPVWILDN-ILDQLIFPKLQKEVENWNPLT-------DTVPIHSWIHP 556  

                   WLplLGsrledPkstglypdIRrKLrraLdvWhpsDrSayaiLspWKdVF
                   WLpl++ rle     +ly++IR+KL++aL++WhpsD+Sa++iL+pWKdVF
     he00358   557 WLPLMQARLE-----PLYSPIRSKLSSALQKWHPSDSSAKLILQPWKDVF 601  

                   dsesWdalVlrrhIvPKLglaLreeftiN<-*
                   +++sW+a+ ++++IvPKLg++L+ e++iN   
     he00358   602 TPGSWEAF-MVKNIVPKLGMCLG-ELVIN    628  

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