hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090630/iprscan-20090630-17204739/chunk_1/iprscan-20090630-17204739.nocrc
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Query sequence: hg00426s1
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01363.12.ls FYVE zinc finger                               105.3    1.7e-28   1
PF01363.12.fs FYVE zinc finger                               103.4    6.1e-28   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01363.12.fs   1/1    1820  1886 ..     1    77 []   103.4  6.1e-28
PF01363.12.ls   1/1    1820  1886 ..     1    77 []   105.3  1.7e-28

Alignments of top-scoring domains:
PF01363.12.fs: domain 1 of 1, from 1820 to 1886: score 103.4, E = 6.1e-28
                   *->phWvpDeevsnCmrCgkpFtkltkRrHHCRaCGrifCgsCssktvll
                      ++WvpDe++s+Cm+C+++++++++RrHHCR CGr++C+sCs k++ +
   hg00426s1  1820    HQWVPDETESICMVCCREHFTMFNRRHHCRRCGRLVCSSCSTKKMVV 1866 

                   pylgiaallkndviekpvRVCdsCydrlnk<-*
                   + ++          e+p+RVCd+Cy+++nk   
   hg00426s1  1867 EGCR----------ENPARVCDQCYSYCNK    1886 

PF01363.12.ls: domain 1 of 1, from 1820 to 1886: score 105.3, E = 1.7e-28
                   *->phWvpDeevsnCmrCgkpFtkltkRrHHCRaCGrifCgsCssktvll
                      ++WvpDe++s+Cm+C+++++++++RrHHCR CGr++C+sCs k++ +
   hg00426s1  1820    HQWVPDETESICMVCCREHFTMFNRRHHCRRCGRLVCSSCSTKKMVV 1866 

                   pylgiaallkndviekpvRVCdsCydrlnk<-*
                   + ++          e+p+RVCd+Cy+++nk   
   hg00426s1  1867 EGCR----------ENPARVCDQCYSYCNK    1886 

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