hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-01430199/chunk_1/iprscan-20080812-01430199.nocrc
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Query sequence: hg00715
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00401                                                  66.6    3.2e-15   1
SM00717                                                  37.5    1.8e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00717    1/1     152   201 ..     1    53 []    37.5  1.8e-06
SM00401    1/1     261   312 ..     1    54 []    66.6  3.2e-15

Alignments of top-scoring domains:
SM00717: domain 1 of 1, from 152 to 201: score 37.5, E = 1.8e-06
                   *->kkgeWteeEdelLleavkkyGkgtdndWakIakelp.gRtpkqcrer
                        + Wte+E +++++++++yG    +++ +I kel +++   +++ +
     hg00715   152    IEKCWTEDEVKRFVKGLRQYG----KNFFRIRKELLpNKETGELITF 194  

                   wrnllkp<-*
                   ++ ++k+   
     hg00715   195 YYYWKKT    201  

SM00401: domain 1 of 1, from 261 to 312: score 66.6, E = 3.2e-15
                   *->kgsgrrCsnCgtttTplWRrgpsGnqktLCNACGLyykkhgvkkrpl
                        +g++C +C ttt+++W++g++ n  +LC++C++++kk+g+ ++p+
     hg00715   261    ELKGYACRHCFTTTSKDWHHGGREN-ILLCTDCRIHFKKYGE-LPPI 305  

                   slkkdgi<-*
                   +++ d++   
     hg00715   306 EKPVDPP    312  

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