# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohg00916.fasta.nr -Q hg00916.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hg00916, 552 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6825233 sequences Expectation_n fit: rho(ln(x))= 7.2001+/-0.000207; mu= 2.6615+/- 0.011 mean_var=166.2926+/-32.436, 0's: 36 Z-trim: 95 B-trim: 201 in 2/64 Lambda= 0.099458 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087594|dbj|BAD92244.1| RNA binding motif prot ( 552) 3594 527.8 2.7e-147 gi|119594959|gb|EAW74553.1| RNA binding motif prot ( 618) 3282 483.1 8.6e-134 gi|114638745|ref|XP_001172363.1| PREDICTED: RNA bi ( 618) 3278 482.5 1.3e-133 gi|109105259|ref|XP_001109150.1| PREDICTED: RNA bi ( 618) 3246 478.0 3.1e-132 gi|16307494|gb|AAH10294.1| Rbm14 protein [Mus musc ( 618) 3218 473.9 5e-131 gi|149061998|gb|EDM12421.1| rCG48334, isoform CRA_ ( 614) 3161 465.8 1.4e-128 gi|62897219|dbj|BAD96550.1| RNA binding motif prot ( 669) 3158 465.4 2.1e-128 gi|73913750|sp|Q96PK6|RBM14_HUMAN RNA-binding prot ( 669) 3158 465.4 2.1e-128 gi|15022507|gb|AAK77961.1|AF315632_1 coactivator a ( 669) 3155 464.9 2.8e-128 gi|114638743|ref|XP_001172373.1| PREDICTED: RNA bi ( 669) 3154 464.8 3.1e-128 gi|73621448|sp|Q5RC41.1|RBM14_PONAB RNA-binding pr ( 669) 3152 464.5 3.8e-128 gi|148701115|gb|EDL33062.1| mCG8382, isoform CRA_c ( 614) 3149 464.0 4.8e-128 gi|73621446|sp|Q5EA36|RBM14_BOVIN RNA-binding prot ( 669) 3137 462.3 1.7e-127 gi|109105253|ref|XP_001109362.1| PREDICTED: RNA bi ( 669) 3122 460.2 7.4e-127 gi|149061997|gb|EDM12420.1| rCG48334, isoform CRA_ ( 669) 3119 459.8 1e-126 gi|114638747|ref|XP_001172254.1| PREDICTED: simila ( 551) 3109 458.2 2.4e-126 gi|73621447|sp|Q8C2Q3|RBM14_MOUSE RNA-binding prot ( 669) 3108 458.2 3e-126 gi|73982916|ref|XP_852283.1| PREDICTED: similar to ( 551) 3106 457.8 3.2e-126 gi|12836486|dbj|BAB23678.1| unnamed protein produc ( 669) 3080 454.2 4.8e-125 gi|109105255|ref|XP_001108929.1| PREDICTED: RNA bi ( 551) 3077 453.7 5.7e-125 gi|126338860|ref|XP_001379260.1| PREDICTED: simila ( 601) 2635 390.3 7.5e-106 gi|74139976|dbj|BAE31823.1| unnamed protein produc ( 636) 2591 384.0 6.2e-104 gi|53547|emb|CAA36322.1| 16 kDA protein [Mus muscu ( 573) 2560 379.5 1.3e-102 gi|15022511|gb|AAK77963.1|AF327567_1 coactivator a ( 278) 1720 258.7 1.4e-66 gi|109105251|ref|XP_001109416.1| PREDICTED: RNA bi ( 725) 1604 242.4 2.9e-61 gi|118116476|ref|XP_423757.2| PREDICTED: similar t ( 667) 1037 161.0 8.5e-37 gi|194388516|dbj|BAG60226.1| unnamed protein produ ( 213) 949 147.9 2.4e-33 gi|193907696|gb|EDW06563.1| GI21801 [Drosophila mo ( 738) 489 82.4 4.3e-13 gi|193895755|gb|EDV94621.1| GH22120 [Drosophila gr ( 836) 477 80.8 1.5e-12 gi|158031701|gb|ABW09327.1| CG34333-PA [Drosophila ( 578) 450 76.7 1.7e-11 gi|194141983|gb|EDW58391.1| GJ14320 [Drosophila vi ( 692) 437 74.9 7.2e-11 gi|194133050|gb|EDW54618.1| GM18689 [Drosophila se ( 678) 432 74.2 1.2e-10 gi|190648316|gb|EDV45609.1| GG12928 [Drosophila er ( 558) 416 71.8 5e-10 gi|194203350|gb|EDX16926.1| GD16605 [Drosophila si ( 538) 410 71.0 8.8e-10 gi|193893194|gb|EDV92060.1| GH24704 [Drosophila gr ( 692) 411 71.2 9.6e-10 gi|190651317|gb|EDV48572.1| GG16353 [Drosophila er ( 927) 411 71.3 1.2e-09 gi|190626691|gb|EDV42215.1| GF17870 [Drosophila an ( 871) 404 70.3 2.3e-09 gi|194121927|gb|EDW43970.1| GM19220 [Drosophila se ( 506) 400 69.5 2.3e-09 gi|70905643|gb|AAZ14282.1| proteophosphoglycan ppg (2425) 399 70.0 7.7e-09 gi|125719359|gb|ABN54457.1| enhancer of glp-1 [Cae (1492) 392 68.8 1.1e-08 gi|70905641|gb|AAZ14280.1| proteophosphoglycan ppg (7194) 401 70.7 1.4e-08 gi|33589386|gb|AAQ22460.1| RE39441p [Drosophila me (1071) 387 67.9 1.4e-08 gi|134073236|emb|CAM71958.1| proteophosphoglycan p (5967) 397 70.1 1.8e-08 gi|194102905|gb|EDW24948.1| GL23112 [Drosophila pe ( 721) 377 66.3 2.9e-08 gi|190617262|gb|EDV32786.1| GF22208 [Drosophila an ( 563) 375 66.0 3e-08 gi|70905642|gb|AAZ14281.1| proteophosphoglycan 5 [ (17392) 397 70.5 3.9e-08 gi|194168773|gb|EDW83674.1| GK13553 [Drosophila wi ( 779) 374 66.0 4.1e-08 gi|193899082|gb|EDV97948.1| GH17164 [Drosophila gr (1132) 372 65.8 6.6e-08 gi|194108703|gb|EDW30746.1| GL13336 [Drosophila pe ( 480) 361 63.9 1.1e-07 gi|194154651|gb|EDW69835.1| GJ13481 [Drosophila vi (1757) 364 64.8 2e-07 >>gi|62087594|dbj|BAD92244.1| RNA binding motif protein (552 aa) initn: 3594 init1: 3594 opt: 3594 Z-score: 2799.7 bits: 527.8 E(): 2.7e-147 Smith-Waterman score: 3594; 100.000% identity (100.000% similar) in 552 aa overlap (1-552:1-552) 10 20 30 40 50 60 hg0091 HTPGEEGLEALEVAGNSWVLLCVQFGTHQVACPAPLIANPLSAALSDYAFVHMEKEADAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 HTPGEEGLEALEVAGNSWVLLCVQFGTHQVACPAPLIANPLSAALSDYAFVHMEKEADAK 10 20 30 40 50 60 70 80 90 100 110 120 hg0091 AAIAQLNGKEVKGKRINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AAIAQLNGKEVKGKRINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFD 70 80 90 100 110 120 130 140 150 160 170 180 hg0091 YQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 YQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLG 130 140 150 160 170 180 190 200 210 220 230 240 hg0091 AAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYG 190 200 210 220 230 240 250 260 270 280 290 300 hg0091 GAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYN 250 260 270 280 290 300 310 320 330 340 350 360 hg0091 TQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 TQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYS 310 320 330 340 350 360 370 380 390 400 410 420 hg0091 SQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSY 370 380 390 400 410 420 430 440 450 460 470 480 hg0091 GAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGN 430 440 450 460 470 480 490 500 510 520 530 540 hg0091 AYDGAGQPSAAYLSMSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYCMPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AYDGAGQPSAAYLSMSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYCMPP 490 500 510 520 530 540 550 hg0091 RLCPQLGLRARG :::::::::::: gi|620 RLCPQLGLRARG 550 >>gi|119594959|gb|EAW74553.1| RNA binding motif protein (618 aa) initn: 3282 init1: 3282 opt: 3282 Z-score: 2557.1 bits: 483.1 E(): 8.6e-134 Smith-Waterman score: 3282; 99.606% identity (100.000% similar) in 508 aa overlap (45-552:111-618) 20 30 40 50 60 70 hg0091 GNSWVLLCVQFGTHQVACPAPLIANPLSAALSDYAFVHMEKEADAKAAIAQLNGKEVKGK ..:::::::::::::::::::::::::::: gi|119 IFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGK 90 100 110 120 130 140 80 90 100 110 120 130 hg0091 RINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 RINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG 150 160 170 180 190 200 140 150 160 170 180 190 hg0091 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG 210 220 230 240 250 260 200 210 220 230 240 250 hg0091 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG 270 280 290 300 310 320 260 270 280 290 300 310 hg0091 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQ 330 340 350 360 370 380 320 330 340 350 360 370 hg0091 AASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAA 390 400 410 420 430 440 380 390 400 410 420 430 hg0091 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA 450 460 470 480 490 500 440 450 460 470 480 490 hg0091 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLS 510 520 530 540 550 560 500 510 520 530 540 550 hg0091 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYCMPPRLCPQLGLRARG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYCMPPRLCPQLGLRARG 570 580 590 600 610 >>gi|114638745|ref|XP_001172363.1| PREDICTED: RNA bindin (618 aa) initn: 3278 init1: 3278 opt: 3278 Z-score: 2554.0 bits: 482.5 E(): 1.3e-133 Smith-Waterman score: 3278; 99.409% identity (100.000% similar) in 508 aa overlap (45-552:111-618) 20 30 40 50 60 70 hg0091 GNSWVLLCVQFGTHQVACPAPLIANPLSAALSDYAFVHMEKEADAKAAIAQLNGKEVKGK ..:::::::::::::::::::::::::::: gi|114 IFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGK 90 100 110 120 130 140 80 90 100 110 120 130 hg0091 RINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG 150 160 170 180 190 200 140 150 160 170 180 190 hg0091 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG 210 220 230 240 250 260 200 210 220 230 240 250 hg0091 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG 270 280 290 300 310 320 260 270 280 290 300 310 hg0091 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQ ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|114 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAAASYNTQGAASSLGSYGAQ 330 340 350 360 370 380 320 330 340 350 360 370 hg0091 AASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAA 390 400 410 420 430 440 380 390 400 410 420 430 hg0091 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA 450 460 470 480 490 500 440 450 460 470 480 490 hg0091 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLS 510 520 530 540 550 560 500 510 520 530 540 550 hg0091 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYCMPPRLCPQLGLRARG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYCMPPRLCPQLGLRARG 570 580 590 600 610 >>gi|109105259|ref|XP_001109150.1| PREDICTED: RNA bindin (618 aa) initn: 3246 init1: 3246 opt: 3246 Z-score: 2529.2 bits: 478.0 E(): 3.1e-132 Smith-Waterman score: 3246; 98.819% identity (99.409% similar) in 508 aa overlap (45-552:111-618) 20 30 40 50 60 70 hg0091 GNSWVLLCVQFGTHQVACPAPLIANPLSAALSDYAFVHMEKEADAKAAIAQLNGKEVKGK ..:::::::::::::::::::::::::::: gi|109 IFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGK 90 100 110 120 130 140 80 90 100 110 120 130 hg0091 RINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 RINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG 150 160 170 180 190 200 140 150 160 170 180 190 hg0091 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG 210 220 230 240 250 260 200 210 220 230 240 250 hg0091 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG 270 280 290 300 310 320 260 270 280 290 300 310 hg0091 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQ 330 340 350 360 370 380 320 330 340 350 360 370 hg0091 AASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAA 390 400 410 420 430 440 380 390 400 410 420 430 hg0091 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA 450 460 470 480 490 500 440 450 460 470 480 490 hg0091 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLS ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: gi|109 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQQSAAYLS 510 520 530 540 550 560 500 510 520 530 540 550 hg0091 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYCMPPRLCPQLGLRARG ::::::.::::::: :: :::::::::::::::::::::::::::::::::::::::: gi|109 MSQGAVSNANSTPPSYEGTRLSPPRASYDDPYKKAVAMSKRYCMPPRLCPQLGLRARG 570 580 590 600 610 >>gi|16307494|gb|AAH10294.1| Rbm14 protein [Mus musculus (618 aa) initn: 3218 init1: 3218 opt: 3218 Z-score: 2507.5 bits: 473.9 E(): 5e-131 Smith-Waterman score: 3218; 97.441% identity (99.803% similar) in 508 aa overlap (45-552:111-618) 20 30 40 50 60 70 hg0091 GNSWVLLCVQFGTHQVACPAPLIANPLSAALSDYAFVHMEKEADAKAAIAQLNGKEVKGK ..:::::::::::::::::::::::::::: gi|163 IFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGK 90 100 110 120 130 140 80 90 100 110 120 130 hg0091 RINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG :::::::::::::::.::.::::::::::::::::::::::::::::::::::::::::: gi|163 RINVELSTKGQKKGPALAIQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG 150 160 170 180 190 200 140 150 160 170 180 190 hg0091 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|163 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG 210 220 230 240 250 260 200 210 220 230 240 250 hg0091 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG ::::::.::::::::::::::::::::::::::::::::::::::::.::::::::.::: gi|163 YRTQPMAAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGVQPSASALSTYGG 270 280 290 300 310 320 260 270 280 290 300 310 hg0091 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|163 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQ 330 340 350 360 370 380 320 330 340 350 360 370 hg0091 AASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAA ::::::::::::::::::::::.:::::::.::::::::::::::::::::::::::::: gi|163 AASYGAQSAASSLAYGAQAASYSAQPSASYSAQSAPYAAQQAASYSSQPAAYVAQPATAA 390 400 410 420 430 440 380 390 400 410 420 430 hg0091 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|163 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASIGLSGSYGAQSAAAATGSYGA 450 460 470 480 490 500 440 450 460 470 480 490 hg0091 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLS :::::::::::::::::::::::::::::::::::::::::::::.::::.::::::::: gi|163 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGSAYDGTGQPSAAYLS 510 520 530 540 550 560 500 510 520 530 540 550 hg0091 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYCMPPRLCPQLGLRARG :::::::::::::::::::::::::::::::::::::::::::::::: ::::::::: gi|163 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYCMPPRLSPQLGLRARG 570 580 590 600 610 >>gi|149061998|gb|EDM12421.1| rCG48334, isoform CRA_f [R (614 aa) initn: 3156 init1: 3156 opt: 3161 Z-score: 2463.3 bits: 465.8 E(): 1.4e-128 Smith-Waterman score: 3161; 97.018% identity (99.006% similar) in 503 aa overlap (45-547:111-613) 20 30 40 50 60 70 hg0091 GNSWVLLCVQFGTHQVACPAPLIANPLSAALSDYAFVHMEKEADAKAAIAQLNGKEVKGK ..:::::::::::::::::::::::::::: gi|149 IFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGK 90 100 110 120 130 140 80 90 100 110 120 130 hg0091 RINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG :::::::::::::::.::.::::::::::::::::::::::::::::::::::::::::: gi|149 RINVELSTKGQKKGPALAIQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG 150 160 170 180 190 200 140 150 160 170 180 190 hg0091 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG 210 220 230 240 250 260 200 210 220 230 240 250 hg0091 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG :::::::::::::::::::::::::::::::::::::::::::::::.::::::::.::: gi|149 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGVQPSASALSTYGG 270 280 290 300 310 320 260 270 280 290 300 310 hg0091 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQ 330 340 350 360 370 380 320 330 340 350 360 370 hg0091 AASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAA ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::.:: gi|149 AASYGAQSAASSLAYGAQAASYNAQPSASYSAQSAPYAAQQAASYSSQPAAYVAQPAAAA 390 400 410 420 430 440 380 390 400 410 420 430 hg0091 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA 450 460 470 480 490 500 440 450 460 470 480 490 hg0091 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLS :::::::::::::::::::::::::::::::::::::::::::::.::::.::::::::: gi|149 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGSAYDGTGQPSAAYLS 510 520 530 540 550 560 500 510 520 530 540 550 hg0091 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYCMPPRLCPQLGLRARG :::::::::::::::::::::::::::::::::::::::::::::: : : gi|149 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYCMPPLPQPPAGA 570 580 590 600 610 >>gi|62897219|dbj|BAD96550.1| RNA binding motif protein (669 aa) initn: 3158 init1: 3158 opt: 3158 Z-score: 2460.5 bits: 465.4 E(): 2.1e-128 Smith-Waterman score: 3158; 98.795% identity (99.197% similar) in 498 aa overlap (45-542:111-608) 20 30 40 50 60 70 hg0091 GNSWVLLCVQFGTHQVACPAPLIANPLSAALSDYAFVHMEKEADAKAAIAQLNGKEVKGK ..:::::::::::::::::::::::::::: gi|628 IFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGK 90 100 110 120 130 140 80 90 100 110 120 130 hg0091 RINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 RINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG 150 160 170 180 190 200 140 150 160 170 180 190 hg0091 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG 210 220 230 240 250 260 200 210 220 230 240 250 hg0091 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG 270 280 290 300 310 320 260 270 280 290 300 310 hg0091 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQ 330 340 350 360 370 380 320 330 340 350 360 370 hg0091 AASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 AASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAA 390 400 410 420 430 440 380 390 400 410 420 430 hg0091 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA 450 460 470 480 490 500 440 450 460 470 480 490 hg0091 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLS 510 520 530 540 550 560 500 510 520 530 540 550 hg0091 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYCMPPRLCPQLGLRARG :::::::::::::::::::::::::::::::::::::::::: :: gi|628 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYGSDRRLVELSDYRRLSES 570 580 590 600 610 620 gi|628 QLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYLRAAQMHSGYQRRM 630 640 650 660 >>gi|73913750|sp|Q96PK6|RBM14_HUMAN RNA-binding protein (669 aa) initn: 3158 init1: 3158 opt: 3158 Z-score: 2460.5 bits: 465.4 E(): 2.1e-128 Smith-Waterman score: 3158; 98.795% identity (99.197% similar) in 498 aa overlap (45-542:111-608) 20 30 40 50 60 70 hg0091 GNSWVLLCVQFGTHQVACPAPLIANPLSAALSDYAFVHMEKEADAKAAIAQLNGKEVKGK ..:::::::::::::::::::::::::::: gi|739 IFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGK 90 100 110 120 130 140 80 90 100 110 120 130 hg0091 RINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG 150 160 170 180 190 200 140 150 160 170 180 190 hg0091 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG 210 220 230 240 250 260 200 210 220 230 240 250 hg0091 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG 270 280 290 300 310 320 260 270 280 290 300 310 hg0091 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQ 330 340 350 360 370 380 320 330 340 350 360 370 hg0091 AASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 AASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAA 390 400 410 420 430 440 380 390 400 410 420 430 hg0091 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA 450 460 470 480 490 500 440 450 460 470 480 490 hg0091 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLS 510 520 530 540 550 560 500 510 520 530 540 550 hg0091 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYCMPPRLCPQLGLRARG :::::::::::::::::::::::::::::::::::::::::: :: gi|739 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYGSDRRLAELSDYRRLSES 570 580 590 600 610 620 gi|739 QLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYLRAAQMHSGYQRRM 630 640 650 660 >>gi|15022507|gb|AAK77961.1|AF315632_1 coactivator activ (669 aa) initn: 3155 init1: 3155 opt: 3155 Z-score: 2458.2 bits: 464.9 E(): 2.8e-128 Smith-Waterman score: 3155; 98.594% identity (99.197% similar) in 498 aa overlap (45-542:111-608) 20 30 40 50 60 70 hg0091 GNSWVLLCVQFGTHQVACPAPLIANPLSAALSDYAFVHMEKEADAKAAIAQLNGKEVKGK ..:::::::::::::::::::::::::::: gi|150 IFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGK 90 100 110 120 130 140 80 90 100 110 120 130 hg0091 RINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|150 RINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG 150 160 170 180 190 200 140 150 160 170 180 190 hg0091 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|150 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG 210 220 230 240 250 260 200 210 220 230 240 250 hg0091 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|150 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG 270 280 290 300 310 320 260 270 280 290 300 310 hg0091 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|150 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQ 330 340 350 360 370 380 320 330 340 350 360 370 hg0091 AASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|150 AASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAA 390 400 410 420 430 440 380 390 400 410 420 430 hg0091 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|150 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA 450 460 470 480 490 500 440 450 460 470 480 490 hg0091 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|150 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLT 510 520 530 540 550 560 500 510 520 530 540 550 hg0091 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYCMPPRLCPQLGLRARG :::::::::::::::::::::::::::::::::::::::::: :: gi|150 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYGSDRRLAELSDYRRLSES 570 580 590 600 610 620 gi|150 QLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYLRAAQMHSGYQRRM 630 640 650 660 >>gi|114638743|ref|XP_001172373.1| PREDICTED: RNA bindin (669 aa) initn: 3154 init1: 3154 opt: 3154 Z-score: 2457.4 bits: 464.8 E(): 3.1e-128 Smith-Waterman score: 3154; 98.594% identity (99.197% similar) in 498 aa overlap (45-542:111-608) 20 30 40 50 60 70 hg0091 GNSWVLLCVQFGTHQVACPAPLIANPLSAALSDYAFVHMEKEADAKAAIAQLNGKEVKGK ..:::::::::::::::::::::::::::: gi|114 IFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGK 90 100 110 120 130 140 80 90 100 110 120 130 hg0091 RINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RINVELSTKGQKKGPGLAVQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDG 150 160 170 180 190 200 140 150 160 170 180 190 hg0091 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVG 210 220 230 240 250 260 200 210 220 230 240 250 hg0091 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 YRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGG 270 280 290 300 310 320 260 270 280 290 300 310 hg0091 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQ ::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::: gi|114 QAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAAASYNTQGAASSLGSYGAQ 330 340 350 360 370 380 320 330 340 350 360 370 hg0091 AASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAA 390 400 410 420 430 440 380 390 400 410 420 430 hg0091 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGA 450 460 470 480 490 500 440 450 460 470 480 490 hg0091 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 AAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLS 510 520 530 540 550 560 500 510 520 530 540 550 hg0091 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYCMPPRLCPQLGLRARG :::::::::::::::::::::::::::::::::::::::::: :: gi|114 MSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYGSDRRLAELSDYRRLSES 570 580 590 600 610 620 gi|114 QLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYLRAAQMHSGYQRRM 630 640 650 660 552 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 01:46:49 2008 done: Tue Aug 12 01:49:02 2008 Total Scan time: 907.700 Total Display time: 0.190 Function used was FASTA [version 34.26.5 April 26, 2007]