hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-02183533/chunk_1/iprscan-20080812-02183533.nocrc
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Query sequence: hg01629
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00325                                                 229.2    3.6e-64   1
SM00233                                                  46.1    4.5e-09   1
SM00150                                                  32.3    6.7e-05   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00150     1/1     187   288 ..     1   104 []    32.3  6.7e-05
SM00325     1/1     481   656 ..     1   211 []   229.2  3.6e-64
SM00233     1/1     687   793 ..     1    82 []    46.1  4.5e-09

Alignments of top-scoring domains:
SM00150: domain 1 of 1, from 187 to 288: score 32.3, E = 6.7e-05
                   *->qqFlrdadeleaWleeke.qllssedlgeskDlesveallkkHqale
                      ++F +d ++l   +e   +q+++  d+   +++++v++++kk++ l+
     hg01629   187    WKFEQDFQQLVTEVEFLLnQQAELADVT--GTIAQVKQKIKKLENLD 231  

                   aelaaheervdalnelgeqLieesghpdaeeIeerleelnerWeeLlela
                   +  ++   + + ++  g +L ++ +h++ + I +r++el+   + L +  
     hg01629   232 ENSQELLSKAQFVILHGHKLAAN-HHYALDLICQRCNELRYLSDILVNEI 280  

                   eeRrqkLe<-*
                   +++r +L    
     hg01629   281 KAKRIQLS    288  

SM00325: domain 1 of 1, from 481 to 656: score 229.2, E = 3.6e-64
                   *->vlkELlqTErnYVrdLkilvevflkpLkkeakssllpllspdevktl
                      vl+EL+qTEr YVr+L +++ +++ +++++++++l+p+l ++++++l
     hg01629   481    VLNELIQTERVYVRELYTVLLGYRAEMDNPEMFDLMPPLLRNKKDIL 527  

                   FgpNieeiyefH.rrFLdeLeerveewllskdlKsernsviedsgerigd
                   Fg N+ eiyefH+ +FL +Le +                   + +er+g 
     hg01629   528 FG-NMAEIYEFHnDIFLSSLENCA------------------HAPERVGP 558  

                   vFlklfsaeeffkiYseYcsnhpdalellkkLmkkkknpaFqkflkeies
                   +Fl+    +++f++Y++Yc+n+p+++ +++k     + +aF++++++  +
     hg01629   559 CFLER---KDDFQMYAKYCQNKPRSETIWRK----YSECAFFQECQRKLK 601  

                   kpncrsksearltLeslLikPvQRltkYpLLLkellkhtppdhedredLk
                   +         rl L+s+L+kPvQR+tkY+LLLkellk+++ d+e    Lk
     hg01629   602 H---------RLRLDSYLLKPVQRITKYQLLLKELLKYSK-DCEGSALLK 641  

                   kAleaikelasqvNe<-*
                   kAl+a+ +l+++vN+   
     hg01629   642 KALDAMLDLLKSVND    656  

SM00233: domain 1 of 1, from 687 to 793: score 46.1, E = 4.5e-09
                   *->vikeGwLlkks..k.swkkryfvLfngvLlyyksk............
                        k+G  ++k   + + ++r+++L+++ ++++k + ++++++++ ++
     hg01629   687    GHKKGATKMKDlaRfKPMQRHLFLYEKAIVFCKRRvesgegsdryps 733  

                   .kpkgsipLsgcsvre.p.....cFeivt.dr..tlllqAeseeereeWv
                    + k++  ++++ ++e ++++++ Fei+++++++++++qA++ + +  W+
     hg01629   734 ySFKHCWKMDEVGITEyVkgdnrKFEIWYgEKeeVYIVQASNVDVKMTWL 783  

                   ealqsaiaka<-*
                   + +++ + k+   
     hg01629   784 KEIRNILLKQ    793  

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