# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohg02529.fasta.nr -Q hg02529.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hg02529, 350 aa vs /cdna2/lib/nr/nr library 2779448989 residues in 8089198 sequences statistics sampled from 60000 to 8085807 sequences Expectation_n fit: rho(ln(x))= 4.7246+/-0.000185; mu= 12.5495+/- 0.010 mean_var=73.5476+/-14.475, 0's: 36 Z-trim: 45 B-trim: 1697 in 1/63 Lambda= 0.149551 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8089198) gi|19855066|sp|O75144.2|ICOSL_HUMAN RecName: Full= ( 302) 2005 441.6 1e-121 gi|119629852|gb|EAX09447.1| inducible T-cell co-st ( 473) 1990 438.5 1.3e-120 gi|6983944|gb|AAF34739.1|AF199028_1 B7-like protei ( 309) 1982 436.6 3.2e-120 gi|114684745|ref|XP_531578.2| PREDICTED: similar t ( 309) 1954 430.6 2.1e-118 gi|221039782|dbj|BAH11654.1| unnamed protein produ ( 217) 1446 320.8 1.6e-85 gi|221045740|dbj|BAH14547.1| unnamed protein produ ( 217) 1440 319.5 3.9e-85 gi|221045674|dbj|BAH14514.1| unnamed protein produ ( 217) 1435 318.5 8.3e-85 gi|149742301|ref|XP_001490589.1| PREDICTED: simila ( 371) 1183 264.3 2.8e-68 gi|76608584|ref|XP_584543.2| PREDICTED: similar to ( 334) 1157 258.7 1.3e-66 gi|119629851|gb|EAX09446.1| inducible T-cell co-st ( 185) 1124 251.3 1.2e-64 gi|74001527|ref|XP_544918.2| PREDICTED: similar to ( 289) 1018 228.6 1.2e-57 gi|109509284|ref|XP_574731.2| PREDICTED: similar t ( 473) 899 203.1 9.4e-50 gi|109509898|ref|XP_001079346.1| PREDICTED: simila ( 300) 868 196.3 7e-48 gi|149043610|gb|EDL97061.1| similar to B7-like pro ( 282) 830 188.0 2e-45 gi|149043609|gb|EDL97060.1| similar to B7-like pro ( 276) 815 184.8 1.8e-44 gi|15214053|sp|Q9JHJ8.1|ICOSL_MOUSE RecName: Full= ( 322) 773 175.8 1.1e-41 gi|15011418|gb|AAK77544.1|AF394451_1 B7-like prote ( 347) 764 173.9 4.4e-41 gi|126325489|ref|XP_001377700.1| PREDICTED: simila ( 294) 729 166.3 7.4e-39 gi|149633875|ref|XP_001512359.1| PREDICTED: simila ( 488) 639 147.1 7.4e-33 gi|2462297|emb|CAA70058.1| ICOS ligand [Gallus gal ( 296) 501 117.1 4.8e-24 gi|224042593|ref|XP_002190055.1| PREDICTED: simila ( 431) 440 104.1 5.7e-20 gi|120537607|gb|AAI29188.1| Zgc:158279 [Danio reri ( 300) 350 84.5 3.1e-14 gi|189531993|ref|XP_700973.3| PREDICTED: hypotheti ( 356) 350 84.6 3.5e-14 gi|165993223|emb|CAP71923.1| zgc:158279 [Danio rer ( 300) 344 83.2 7.6e-14 gi|37181811|gb|AAQ88709.1| B7 hlog [Homo sapiens] ( 316) 341 82.6 1.2e-13 gi|13194193|gb|AAK15438.1| costimulatory molecule ( 316) 340 82.4 1.4e-13 gi|149041841|gb|EDL95682.1| CD276 antigen [Rattus ( 271) 338 81.9 1.7e-13 gi|148694007|gb|EDL25954.1| CD276 antigen [Mus mus ( 271) 337 81.7 2e-13 gi|194038707|ref|XP_001925680.1| PREDICTED: simila ( 552) 339 82.4 2.5e-13 gi|119902042|ref|XP_869501.2| PREDICTED: CD276 mol ( 728) 340 82.7 2.6e-13 gi|109081801|ref|XP_001094062.1| PREDICTED: simila ( 493) 338 82.1 2.6e-13 gi|109081803|ref|XP_001093726.1| PREDICTED: simila ( 522) 338 82.2 2.8e-13 gi|109081799|ref|XP_001093841.1| PREDICTED: simila ( 533) 338 82.2 2.8e-13 gi|109081797|ref|XP_001094177.1| PREDICTED: simila ( 534) 338 82.2 2.8e-13 gi|149691788|ref|XP_001493711.1| PREDICTED: simila ( 317) 330 80.2 6.4e-13 gi|109081805|ref|XP_001093957.1| PREDICTED: simila ( 316) 328 79.8 8.6e-13 gi|81912068|sp|Q7TPB4.1|CD276_RAT RecName: Full=CD ( 316) 326 79.3 1.2e-12 gi|113460091|dbj|BAF03612.1| CD276 antigen [Bos ta ( 528) 328 80.0 1.2e-12 gi|74000969|ref|XP_854204.1| PREDICTED: similar to ( 686) 328 80.1 1.5e-12 gi|81915192|sp|Q8VE98.1|CD276_MOUSE RecName: Full= ( 316) 324 78.9 1.6e-12 gi|158258859|dbj|BAF85400.1| unnamed protein produ ( 388) 322 78.6 2.4e-12 gi|22760809|dbj|BAC11344.1| unnamed protein produc ( 388) 322 78.6 2.4e-12 gi|158256874|dbj|BAF84410.1| unnamed protein produ ( 534) 323 78.9 2.6e-12 gi|114658010|ref|XP_523213.2| PREDICTED: hypotheti ( 534) 323 78.9 2.6e-12 gi|194382964|dbj|BAG59038.1| unnamed protein produ ( 480) 322 78.7 2.8e-12 gi|38511752|gb|AAH62581.1| CD276 protein [Homo sap ( 493) 322 78.7 2.9e-12 gi|22760560|dbj|BAC11243.1| unnamed protein produc ( 533) 322 78.7 3.1e-12 gi|22761770|dbj|BAC11692.1| unnamed protein produc ( 534) 322 78.7 3.1e-12 gi|74757248|sp|Q5ZPR3.1|CD276_HUMAN RecName: Full= ( 534) 322 78.7 3.1e-12 gi|118095510|ref|XP_413702.2| PREDICTED: hypotheti ( 308) 319 77.8 3.2e-12 >>gi|19855066|sp|O75144.2|ICOSL_HUMAN RecName: Full=ICOS (302 aa) initn: 2005 init1: 2005 opt: 2005 Z-score: 2341.8 bits: 441.6 E(): 1e-121 Smith-Waterman score: 2005; 100.000% identity (100.000% similar) in 302 aa overlap (49-350:1-302) 20 30 40 50 60 70 hg0252 PLRGLPRPKFSAPRGLRAPRSPRPEVSARTMRLGSPGLLFLLFSSLRADTQEKEVRAMVG :::::::::::::::::::::::::::::: gi|198 MRLGSPGLLFLLFSSLRADTQEKEVRAMVG 10 20 30 80 90 100 110 120 130 hg0252 SDVELSCACPEGSRFDLNDVYVYWQTSESKTVVTYHIPQNSSLENVDSRYRNRALMSPAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|198 SDVELSCACPEGSRFDLNDVYVYWQTSESKTVVTYHIPQNSSLENVDSRYRNRALMSPAG 40 50 60 70 80 90 140 150 160 170 180 190 hg0252 MLRGDFSLRLFNVTPQDEQKFHCLVLSQSLGFQEVLSVEVTLHVAANFSVPVVSAPHSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|198 MLRGDFSLRLFNVTPQDEQKFHCLVLSQSLGFQEVLSVEVTLHVAANFSVPVVSAPHSPS 100 110 120 130 140 150 200 210 220 230 240 250 hg0252 QDELTFTCTSINGYPRPNVYWINKTDNSLLDQALQNDTVFLNMRGLYDVVSVLRIARTPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|198 QDELTFTCTSINGYPRPNVYWINKTDNSLLDQALQNDTVFLNMRGLYDVVSVLRIARTPS 160 170 180 190 200 210 260 270 280 290 300 310 hg0252 VNIGCCIENVLLQQNLTVGSQTGNDIGERDKITENPVSTGEKNAATWSILAVLCLLVVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|198 VNIGCCIENVLLQQNLTVGSQTGNDIGERDKITENPVSTGEKNAATWSILAVLCLLVVVA 220 230 240 250 260 270 320 330 340 350 hg0252 VAIGWVCRDRCLQHSYAGAWAVSPETELTGHV :::::::::::::::::::::::::::::::: gi|198 VAIGWVCRDRCLQHSYAGAWAVSPETELTGHV 280 290 300 >>gi|119629852|gb|EAX09447.1| inducible T-cell co-stimul (473 aa) initn: 1990 init1: 1990 opt: 1990 Z-score: 2321.9 bits: 438.5 E(): 1.3e-120 Smith-Waterman score: 1990; 100.000% identity (100.000% similar) in 300 aa overlap (49-348:1-300) 20 30 40 50 60 70 hg0252 PLRGLPRPKFSAPRGLRAPRSPRPEVSARTMRLGSPGLLFLLFSSLRADTQEKEVRAMVG :::::::::::::::::::::::::::::: gi|119 MRLGSPGLLFLLFSSLRADTQEKEVRAMVG 10 20 30 80 90 100 110 120 130 hg0252 SDVELSCACPEGSRFDLNDVYVYWQTSESKTVVTYHIPQNSSLENVDSRYRNRALMSPAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SDVELSCACPEGSRFDLNDVYVYWQTSESKTVVTYHIPQNSSLENVDSRYRNRALMSPAG 40 50 60 70 80 90 140 150 160 170 180 190 hg0252 MLRGDFSLRLFNVTPQDEQKFHCLVLSQSLGFQEVLSVEVTLHVAANFSVPVVSAPHSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MLRGDFSLRLFNVTPQDEQKFHCLVLSQSLGFQEVLSVEVTLHVAANFSVPVVSAPHSPS 100 110 120 130 140 150 200 210 220 230 240 250 hg0252 QDELTFTCTSINGYPRPNVYWINKTDNSLLDQALQNDTVFLNMRGLYDVVSVLRIARTPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QDELTFTCTSINGYPRPNVYWINKTDNSLLDQALQNDTVFLNMRGLYDVVSVLRIARTPS 160 170 180 190 200 210 260 270 280 290 300 310 hg0252 VNIGCCIENVLLQQNLTVGSQTGNDIGERDKITENPVSTGEKNAATWSILAVLCLLVVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VNIGCCIENVLLQQNLTVGSQTGNDIGERDKITENPVSTGEKNAATWSILAVLCLLVVVA 220 230 240 250 260 270 320 330 340 350 hg0252 VAIGWVCRDRCLQHSYAGAWAVSPETELTGHV :::::::::::::::::::::::::::::: gi|119 VAIGWVCRDRCLQHSYAGAWAVSPETELTGEFAVGSSRFWGAQGRLGCQLSFRVSKNFQK 280 290 300 310 320 330 >>gi|6983944|gb|AAF34739.1|AF199028_1 B7-like protein [H (309 aa) initn: 1982 init1: 1982 opt: 1982 Z-score: 2314.9 bits: 436.6 E(): 3.2e-120 Smith-Waterman score: 1982; 100.000% identity (100.000% similar) in 299 aa overlap (49-347:1-299) 20 30 40 50 60 70 hg0252 PLRGLPRPKFSAPRGLRAPRSPRPEVSARTMRLGSPGLLFLLFSSLRADTQEKEVRAMVG :::::::::::::::::::::::::::::: gi|698 MRLGSPGLLFLLFSSLRADTQEKEVRAMVG 10 20 30 80 90 100 110 120 130 hg0252 SDVELSCACPEGSRFDLNDVYVYWQTSESKTVVTYHIPQNSSLENVDSRYRNRALMSPAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|698 SDVELSCACPEGSRFDLNDVYVYWQTSESKTVVTYHIPQNSSLENVDSRYRNRALMSPAG 40 50 60 70 80 90 140 150 160 170 180 190 hg0252 MLRGDFSLRLFNVTPQDEQKFHCLVLSQSLGFQEVLSVEVTLHVAANFSVPVVSAPHSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|698 MLRGDFSLRLFNVTPQDEQKFHCLVLSQSLGFQEVLSVEVTLHVAANFSVPVVSAPHSPS 100 110 120 130 140 150 200 210 220 230 240 250 hg0252 QDELTFTCTSINGYPRPNVYWINKTDNSLLDQALQNDTVFLNMRGLYDVVSVLRIARTPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|698 QDELTFTCTSINGYPRPNVYWINKTDNSLLDQALQNDTVFLNMRGLYDVVSVLRIARTPS 160 170 180 190 200 210 260 270 280 290 300 310 hg0252 VNIGCCIENVLLQQNLTVGSQTGNDIGERDKITENPVSTGEKNAATWSILAVLCLLVVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|698 VNIGCCIENVLLQQNLTVGSQTGNDIGERDKITENPVSTGEKNAATWSILAVLCLLVVVA 220 230 240 250 260 270 320 330 340 350 hg0252 VAIGWVCRDRCLQHSYAGAWAVSPETELTGHV ::::::::::::::::::::::::::::: gi|698 VAIGWVCRDRCLQHSYAGAWAVSPETELTESWNLLLLLS 280 290 300 >>gi|114684745|ref|XP_531578.2| PREDICTED: similar to B7 (309 aa) initn: 1954 init1: 1954 opt: 1954 Z-score: 2282.2 bits: 430.6 E(): 2.1e-118 Smith-Waterman score: 1954; 98.328% identity (99.331% similar) in 299 aa overlap (49-347:1-299) 20 30 40 50 60 70 hg0252 PLRGLPRPKFSAPRGLRAPRSPRPEVSARTMRLGSPGLLFLLFSSLRADTQEKEVRAMVG :::::::::::::::::::::::::::::: gi|114 MRLGSPGLLFLLFSSLRADTQEKEVRAMVG 10 20 30 80 90 100 110 120 130 hg0252 SDVELSCACPEGSRFDLNDVYVYWQTSESKTVVTYHIPQNSSLENVDSRYRNRALMSPAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 SDVELSCACPEGSRFDLNDVYVYWQTSESKTVVTYHIPQNSSLENVDSRYRNRALMSPAG 40 50 60 70 80 90 140 150 160 170 180 190 hg0252 MLRGDFSLRLFNVTPQDEQKFHCLVLSQSLGFQEVLSVEVTLHVAANFSVPVVSAPHSPS : :::::::::::::::::::::::::::::::::::.::::::::::::::::.::::: gi|114 MRRGDFSLRLFNVTPQDEQKFHCLVLSQSLGFQEVLSIEVTLHVAANFSVPVVSTPHSPS 100 110 120 130 140 150 200 210 220 230 240 250 hg0252 QDELTFTCTSINGYPRPNVYWINKTDNSLLDQALQNDTVFLNMRGLYDVVSVLRIARTPS :::::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: gi|114 QDELTFTCTSINGYPRPNVYWINKTDNSLLDQALQNDTVFLNTRGLYDVVSVLRIARTPS 160 170 180 190 200 210 260 270 280 290 300 310 hg0252 VNIGCCIENVLLQQNLTVGSQTGNDIGERDKITENPVSTGEKNAATWSILAVLCLLVVVA ::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::: gi|114 VNIGCCIENVLLQQNLTVGSQTGNNIGERDKITENPVSTGEKNAATWSILAVLCLLVVVA 220 230 240 250 260 270 320 330 340 350 hg0252 VAIGWVCRDRCLQHSYAGAWAVSPETELTGHV ::::::::::::::::::::::::::::: gi|114 VAIGWVCRDRCLQHSYAGAWAVSPETELTESWNLLLLLL 280 290 300 >>gi|221039782|dbj|BAH11654.1| unnamed protein product [ (217 aa) initn: 1446 init1: 1446 opt: 1446 Z-score: 1691.8 bits: 320.8 E(): 1.6e-85 Smith-Waterman score: 1446; 100.000% identity (100.000% similar) in 217 aa overlap (134-350:1-217) 110 120 130 140 150 160 hg0252 TSESKTVVTYHIPQNSSLENVDSRYRNRALMSPAGMLRGDFSLRLFNVTPQDEQKFHCLV :::::::::::::::::::::::::::::: gi|221 MSPAGMLRGDFSLRLFNVTPQDEQKFHCLV 10 20 30 170 180 190 200 210 220 hg0252 LSQSLGFQEVLSVEVTLHVAANFSVPVVSAPHSPSQDELTFTCTSINGYPRPNVYWINKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 LSQSLGFQEVLSVEVTLHVAANFSVPVVSAPHSPSQDELTFTCTSINGYPRPNVYWINKT 40 50 60 70 80 90 230 240 250 260 270 280 hg0252 DNSLLDQALQNDTVFLNMRGLYDVVSVLRIARTPSVNIGCCIENVLLQQNLTVGSQTGND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 DNSLLDQALQNDTVFLNMRGLYDVVSVLRIARTPSVNIGCCIENVLLQQNLTVGSQTGND 100 110 120 130 140 150 290 300 310 320 330 340 hg0252 IGERDKITENPVSTGEKNAATWSILAVLCLLVVVAVAIGWVCRDRCLQHSYAGAWAVSPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 IGERDKITENPVSTGEKNAATWSILAVLCLLVVVAVAIGWVCRDRCLQHSYAGAWAVSPE 160 170 180 190 200 210 350 hg0252 TELTGHV ::::::: gi|221 TELTGHV >>gi|221045740|dbj|BAH14547.1| unnamed protein product [ (217 aa) initn: 1440 init1: 1440 opt: 1440 Z-score: 1684.8 bits: 319.5 E(): 3.9e-85 Smith-Waterman score: 1440; 99.539% identity (100.000% similar) in 217 aa overlap (134-350:1-217) 110 120 130 140 150 160 hg0252 TSESKTVVTYHIPQNSSLENVDSRYRNRALMSPAGMLRGDFSLRLFNVTPQDEQKFHCLV :::::::::::::::::::::::::::::: gi|221 MSPAGMLRGDFSLRLFNVTPQDEQKFHCLV 10 20 30 170 180 190 200 210 220 hg0252 LSQSLGFQEVLSVEVTLHVAANFSVPVVSAPHSPSQDELTFTCTSINGYPRPNVYWINKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 LSQSLGFQEVLSVEVTLHVAANFSVPVVSAPHSPSQDELTFTCTSINGYPRPNVYWINKT 40 50 60 70 80 90 230 240 250 260 270 280 hg0252 DNSLLDQALQNDTVFLNMRGLYDVVSVLRIARTPSVNIGCCIENVLLQQNLTVGSQTGND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 DNSLLDQALQNDTVFLNMRGLYDVVSVLRIARTPSVNIGCCIENVLLQQNLTVGSQTGND 100 110 120 130 140 150 290 300 310 320 330 340 hg0252 IGERDKITENPVSTGEKNAATWSILAVLCLLVVVAVAIGWVCRDRCLQHSYAGAWAVSPE :::::::::::::::::.:::::::::::::::::::::::::::::::::::::::::: gi|221 IGERDKITENPVSTGEKSAATWSILAVLCLLVVVAVAIGWVCRDRCLQHSYAGAWAVSPE 160 170 180 190 200 210 350 hg0252 TELTGHV ::::::: gi|221 TELTGHV >>gi|221045674|dbj|BAH14514.1| unnamed protein product [ (217 aa) initn: 1435 init1: 1435 opt: 1435 Z-score: 1679.0 bits: 318.5 E(): 8.3e-85 Smith-Waterman score: 1435; 99.539% identity (99.539% similar) in 217 aa overlap (134-350:1-217) 110 120 130 140 150 160 hg0252 TSESKTVVTYHIPQNSSLENVDSRYRNRALMSPAGMLRGDFSLRLFNVTPQDEQKFHCLV :::::::::::::::::::::::::::::: gi|221 MSPAGMLRGDFSLRLFNVTPQDEQKFHCLV 10 20 30 170 180 190 200 210 220 hg0252 LSQSLGFQEVLSVEVTLHVAANFSVPVVSAPHSPSQDELTFTCTSINGYPRPNVYWINKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 LSQSLGFQEVLSVEVTLHVAANFSVPVVSAPHSPSQDELTFTCTSINGYPRPNVYWINKT 40 50 60 70 80 90 230 240 250 260 270 280 hg0252 DNSLLDQALQNDTVFLNMRGLYDVVSVLRIARTPSVNIGCCIENVLLQQNLTVGSQTGND :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|221 DNSLLDQALQNDTVSLNMRGLYDVVSVLRIARTPSVNIGCCIENVLLQQNLTVGSQTGND 100 110 120 130 140 150 290 300 310 320 330 340 hg0252 IGERDKITENPVSTGEKNAATWSILAVLCLLVVVAVAIGWVCRDRCLQHSYAGAWAVSPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|221 IGERDKITENPVSTGEKNAATWSILAVLCLLVVVAVAIGWVCRDRCLQHSYAGAWAVSPE 160 170 180 190 200 210 350 hg0252 TELTGHV ::::::: gi|221 TELTGHV >>gi|149742301|ref|XP_001490589.1| PREDICTED: similar to (371 aa) initn: 955 init1: 492 opt: 1183 Z-score: 1382.2 bits: 264.3 E(): 2.8e-68 Smith-Waterman score: 1183; 62.013% identity (81.169% similar) in 308 aa overlap (50-350:11-310) 20 30 40 50 60 70 hg0252 LRGLPRPKFSAPRGLRAPRSPRPEVSARTMRLGSPGL--LFLLFSSLRADTQEKEVRAMV :: :.: :.::::.:.::.::::::::: gi|149 MTAVPWRADSRLLPPSLRLLLLLFSGLQADVQEKEVRAMV 10 20 30 40 80 90 100 110 120 130 hg0252 GSDVELSCACPEGSRFDLNDVYVYWQTS---ESKTVVTYHIPQNSSLENVDSRYRNRALM ::.:.:.: :: . :::.:..:::: : ...:::.:.. ::: . :..::.:: . gi|149 GSNVNLTCIYPEKNSFDLSDLFVYWQISVPGQQETVVAYYLSGNSSTGHHDDHYRHRARL 50 60 70 80 90 100 140 150 160 170 180 190 hg0252 SPAGMLRGDFSLRLFNVTPQDEQKFHCLVLSQSLGFQEVLSVEVTLHVAANFSVPVVSAP : :: .::::: : :::::: :::.:::. .::: .:.:.: .::.::::.:.:::: : gi|149 SLEGMKQGDFSLLLSNVTPQDAQKFKCLVFRKSLGPMEILQVVITLNVAANYSMPVVSIP 110 120 130 140 150 160 200 210 220 230 240 250 hg0252 HSPSQD-ELTFTCTSINGYPRPNVYWINKTDNSLLDQALQNDTVFLNMRGLYDVVSVLRI .:::: :::::::: ::::::::::::::::::::.::::.:: :: ::::::::.:.: gi|149 SAPSQDKELTFTCTSTNGYPRPNVYWINKTDNSLLDEALQNNTVSLNERGLYDVVSILKI 170 180 190 200 210 220 260 270 280 290 300 310 hg0252 ARTPSVNIGCCIENVLLQQNLTVGSQTGNDIGERDKITENPVSTGE-KNAATWSILAVLC .:.::.:::::::::.:::::.::: : .:.:::.:. : : .: : .:.::.: gi|149 QWSPNVNVGCCIENVLLHQNLTVSSQTEMLTGTKDSITEKPTETHEERNRALFSVLAILA 230 240 250 260 270 280 320 330 340 350 hg0252 LLVVVAVAIGWVCRDRCLQHSYAGAWAVSPETELTGHV : :.:::: ::.::.::: :..:. :::: . gi|149 LAVAVAVATGWMCRSRCL--------AAGPRQELTGPISVVLTSMGPCSVVLTSMGPCSV 290 300 310 320 330 gi|149 VLTSMRPCSVVLIPTGPISVVLTPAALLCGDGISQTFVL 340 350 360 370 >>gi|76608584|ref|XP_584543.2| PREDICTED: similar to ind (334 aa) initn: 1149 init1: 447 opt: 1157 Z-score: 1352.5 bits: 258.7 E(): 1.3e-66 Smith-Waterman score: 1157; 61.039% identity (80.519% similar) in 308 aa overlap (49-348:1-303) 20 30 40 50 60 70 hg0252 PLRGLPRPKFSAPRGLRAPRSPRPEVSARTMRLGSPGLLFLLFSSLRADTQEKEVRAMVG :: ::::..::. .:.:..:: ::::::: gi|766 MRPRSPGLFLLLLWGLQAESQE-EVRAMVG 10 20 80 90 100 110 120 130 hg0252 SDVELSCACPEGSRFDLNDVYVYWQTSES-----KTVVTYHIPQNSSLENVDSRYRNRAL :::.: : :: . :::::.::::: : . .:::::. ::: . :..:..:: gi|766 SDVQLRCIYPEKNSFDLNDLYVYWQISMAGKGNVDSVVTYHLSGNSSASHGDNHYKDRAR 30 40 50 60 70 80 140 150 160 170 180 190 hg0252 MSPAGMLRGDFSLRLFNVTPQDEQKFHCLVLSQSLGFQEVLSVEVTLHVAANFSVPVVSA .: .: .:::::.: ::::::::::.:::. .:: ....: : ::::::::.:.::::. gi|766 LSLDSMKQGDFSLHLRNVTPQDEQKFNCLVFRKSLELKKILEVAVTLHVAANYSMPVVSG 90 100 110 120 130 140 200 210 220 230 240 250 hg0252 PHSPSQDE-LTFTCTSINGYPRPNVYWINKTDNSLLDQALQNDTVFLNMRGLYDVVSVLR : :::: ::::::: :::::::::::::::::.::.::::.:: :: ::::::::::: gi|766 P---SQDEELTFTCTSTNGYPRPNVYWINKTDNSVLDSALQNNTVSLNARGLYDVVSVLR 150 160 170 180 190 200 260 270 280 290 300 310 hg0252 IARTPSVNIGCCIENVLLQQNLTVGSQTGNDIGERDKITENPV--STGEKNAATWSILAV :.::: ::.:::::::::.:::: : :: . : .:.:::.:: : . :. ..:.::: gi|766 IGRTPHVNVGCCIENVLLHQNLTSG-QTETFTGTKDSITEDPVDGSPSGKHQQVFSVLAV 210 220 230 240 250 260 320 330 340 350 hg0252 LCLLVVVAVAIGWVCRDRCLQHSYAGAWAVSPETELTGHV : ..:..:.: ::.::.:: .: .:: .. :. :.: gi|766 LAVIVLLALATGWLCRSRCPPKSQTGAQVARPKLALAGDSRPAAAWYRSRFTPEACPRGP 270 280 290 300 310 320 gi|766 SWRMRDAAC 330 >>gi|119629851|gb|EAX09446.1| inducible T-cell co-stimul (185 aa) initn: 1124 init1: 1124 opt: 1124 Z-score: 1317.2 bits: 251.3 E(): 1.2e-64 Smith-Waterman score: 1124; 100.000% identity (100.000% similar) in 168 aa overlap (183-350:18-185) 160 170 180 190 200 210 hg0252 PQDEQKFHCLVLSQSLGFQEVLSVEVTLHVAANFSVPVVSAPHSPSQDELTFTCTSINGY :::::::::::::::::::::::::::::: gi|119 MRLGSPGLLFLLFSSLRAANFSVPVVSAPHSPSQDELTFTCTSINGY 10 20 30 40 220 230 240 250 260 270 hg0252 PRPNVYWINKTDNSLLDQALQNDTVFLNMRGLYDVVSVLRIARTPSVNIGCCIENVLLQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PRPNVYWINKTDNSLLDQALQNDTVFLNMRGLYDVVSVLRIARTPSVNIGCCIENVLLQQ 50 60 70 80 90 100 280 290 300 310 320 330 hg0252 NLTVGSQTGNDIGERDKITENPVSTGEKNAATWSILAVLCLLVVVAVAIGWVCRDRCLQH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NLTVGSQTGNDIGERDKITENPVSTGEKNAATWSILAVLCLLVVVAVAIGWVCRDRCLQH 110 120 130 140 150 160 340 350 hg0252 SYAGAWAVSPETELTGHV :::::::::::::::::: gi|119 SYAGAWAVSPETELTGHV 170 180 350 residues in 1 query sequences 2779448989 residues in 8089198 library sequences Tcomplib [34.26] (8 proc) start: Thu Apr 16 16:34:08 2009 done: Thu Apr 16 16:37:08 2009 Total Scan time: 913.710 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]