hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-03095733/chunk_1/iprscan-20080812-03095733.nocrc
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Query sequence: hg03450
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00312                                                 148.9    5.2e-40   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00312    1/1      51   178 ..     1   142 []   148.9  5.2e-40

Alignments of top-scoring domains:
SM00312: domain 1 of 1, from 51 to 178: score 148.9, E = 5.2e-40
                   *->dniaivavveeetsgkkrgdgkhyyyvieietstned...veewtvy
                      d+++ +++++++   +k+gdg+++y++++++t+t+++  +++++ v+
     hg03450    51    DQFDLTVGITDP---EKIGDGMNAYVAYKVTTQTSLPlfrSKQFAVK 94   

                   RRYsdFleLhskLlkkfpqekrrriiPplPekkllgryreraekesm.kv
                   RR+sdFl L++kL++k+ q+  + i+Pp+Pek l+g          m+kv
     hg03450    95 RRFSDFLGLYEKLSEKHSQN--GFIVPPPPEKSLIG----------MtKV 132  

                   kk.slnnfseefiekRrrgLerYLqkllnhPelinhyrvsevvleFLess
                   k+++++++s ef+ekRr  LerYLq+++nhP++ +    +++v+eFLe +
     hg03450   133 KVgKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQ----DPDVREFLEKE 178  

                   <-*
                      
     hg03450     -     -    

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