# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohg04234.fasta.nr -Q hg04234.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hg04234, 306 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6840178 sequences Expectation_n fit: rho(ln(x))= 4.6794+/-0.000181; mu= 11.5415+/- 0.010 mean_var=65.0350+/-12.713, 0's: 37 Z-trim: 52 B-trim: 0 in 0/67 Lambda= 0.159038 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087178|dbj|BAD92036.1| N-methyl-D-aspartate r ( 306) 2079 485.6 4.3e-135 gi|119609608|gb|EAW89202.1| glutamate receptor, io ( 873) 1996 466.9 5.1e-129 gi|26996819|gb|AAH41128.1| Similar to glutamate re ( 907) 1996 466.9 5.3e-129 gi|55770854|ref|NP_000826.2| N-methyl-D-aspartate (1233) 1996 467.0 6.6e-129 gi|2492629|sp|Q14957.1|NMDE3_HUMAN Glutamate [NMDA (1233) 1996 467.0 6.6e-129 gi|187954965|gb|AAI40802.1| GRIN2C protein [Homo s (1236) 1996 467.0 6.6e-129 gi|2444024|gb|AAB71624.1| N-methyl-D-aspartate rec (1236) 1996 467.0 6.6e-129 gi|119609609|gb|EAW89203.1| glutamate receptor, io (1277) 1996 467.1 6.8e-129 gi|114670370|ref|XP_511665.2| PREDICTED: N-methyl- (1025) 1992 466.1 1.1e-128 gi|602753|gb|AAC42045.1| N-methyl-D-aspartate rece (1203) 1968 460.6 5.6e-127 gi|1352507|sp|Q01098.2|NMDE3_MOUSE Glutamate [NMDA (1239) 1968 460.6 5.7e-127 gi|228951|prf||1814459B D-MeAsp receptor:ISOTYPE=e (1239) 1968 460.6 5.7e-127 gi|194675705|ref|XP_615163.4| PREDICTED: similar t (1001) 1962 459.2 1.3e-126 gi|285348|pir||C43274 N-methyl D-aspartate recepto ( 962) 1955 457.5 3.7e-126 gi|548374|sp|Q00961.1|NMDE3_RAT Glutamate [NMDA] r (1237) 1955 457.6 4.5e-126 gi|286236|dbj|BAA02499.1| N-methyl-D-aspartate rec (1250) 1955 457.6 4.5e-126 gi|194216687|ref|XP_001916896.1| PREDICTED: simila (1198) 1953 457.2 6e-126 gi|475550|gb|AAA17832.1| N-methyl-D-aspartate rece (1250) 1945 455.3 2.2e-125 gi|73965062|ref|XP_540421.2| PREDICTED: similar to (1081) 1873 438.8 1.9e-120 gi|189546732|ref|XP_001919859.1| PREDICTED: simila (1328) 1722 404.2 5.9e-110 gi|189526120|ref|XP_001921576.1| PREDICTED: simila (1328) 1722 404.2 5.9e-110 gi|126308783|ref|XP_001378152.1| PREDICTED: simila (1284) 1703 399.8 1.2e-108 gi|189516944|ref|XP_001342934.2| PREDICTED: glutam (1400) 1689 396.6 1.2e-107 gi|47220672|emb|CAG06594.1| unnamed protein produc ( 960) 1651 387.8 3.7e-105 gi|163140747|gb|ABY26544.1| NMDA receptor NR2C sub (1420) 1649 387.5 6.8e-105 gi|119910783|ref|XP_875596.2| PREDICTED: similar t ( 964) 1606 377.5 4.8e-102 gi|73948055|ref|XP_541520.2| PREDICTED: similar to (1202) 1606 377.5 5.6e-102 gi|149055859|gb|EDM07290.1| glutamate receptor, io ( 995) 1605 377.2 5.7e-102 gi|148690957|gb|EDL22904.1| glutamate receptor, io (1053) 1605 377.3 6e-102 gi|149055858|gb|EDM07289.1| glutamate receptor, io (1265) 1605 377.3 6.8e-102 gi|18202594|sp|Q62645.2|NMDE4_RAT Glutamate [NMDA] (1323) 1605 377.4 7.1e-102 gi|469069|gb|AAC37647.1| NMDA receptor subunit NR2 (1323) 1605 377.4 7.1e-102 gi|6093513|sp|Q03391.2|NMDE4_MOUSE Glutamate [NMDA (1323) 1605 377.4 7.1e-102 gi|144922606|ref|NP_032198.2| glutamate receptor, (1323) 1605 377.4 7.1e-102 gi|469067|gb|AAC37646.1| NMDA receptor subunit NR2 (1323) 1605 377.4 7.1e-102 gi|119572731|gb|EAW52346.1| glutamate receptor, io (1336) 1605 377.4 7.1e-102 gi|18201966|sp|O15399.1|NMDE4_HUMAN Glutamate [NMD (1336) 1605 377.4 7.1e-102 gi|286238|dbj|BAA02500.1| N-methyl-D-aspartate rec (1356) 1605 377.4 7.2e-102 gi|348497|pir||C45219 N-methyl-D-aspartate recepto (1356) 1605 377.4 7.2e-102 gi|475552|gb|AAA17833.1| N-methyl-D-aspartate rece (1323) 1600 376.2 1.6e-101 gi|189529618|ref|XP_001921725.1| PREDICTED: simila (1924) 1592 374.5 7.4e-101 gi|47221652|emb|CAF97917.1| unnamed protein produc ( 750) 1565 368.0 2.7e-99 gi|94733332|emb|CAK05185.1| novel protein similar (1886) 1554 365.8 3.1e-98 gi|189532264|ref|XP_001921158.1| PREDICTED: hypoth (1916) 1554 365.8 3.1e-98 gi|25073695|gb|AAN65280.1| NMDA receptor subunit N (1617) 1466 345.5 3.3e-92 gi|122891167|emb|CAM14128.1| novel protein similar (1770) 1450 341.9 4.5e-91 gi|161328408|gb|ABX60543.1| N-methyl-D-aspartate r (1451) 1443 340.2 1.2e-90 gi|149409239|ref|XP_001506052.1| PREDICTED: simila (1465) 1436 338.6 3.6e-90 gi|56122250|gb|AAV74276.1| glutamate receptor iono (1388) 1434 338.1 4.7e-90 gi|55846754|gb|AAV67381.1| glutamate receptor iono ( 971) 1432 337.5 5e-90 >>gi|62087178|dbj|BAD92036.1| N-methyl-D-aspartate recep (306 aa) initn: 2079 init1: 2079 opt: 2079 Z-score: 2580.5 bits: 485.6 E(): 4.3e-135 Smith-Waterman score: 2079; 100.000% identity (100.000% similar) in 306 aa overlap (1-306:1-306) 10 20 30 40 50 60 hg0423 GCHPPQVGRWEHGVLYMKYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVESPDPGTGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GCHPPQVGRWEHGVLYMKYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVESPDPGTGG 10 20 30 40 50 60 70 80 90 100 110 120 hg0423 CVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 CVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDILKKLARVVKFSYDLYLVTNGKHGK 70 80 90 100 110 120 130 140 150 160 170 180 hg0423 RVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 RVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPS 130 140 150 160 170 180 190 200 210 220 230 240 hg0423 AFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTRGKKSGGPAFTIGKSVWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 AFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTRGKKSGGPAFTIGKSVWL 190 200 210 220 230 240 250 260 270 280 290 300 hg0423 LWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 LWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSD 250 260 270 280 290 300 hg0423 KKVVGP :::::: gi|620 KKVVGP >>gi|119609608|gb|EAW89202.1| glutamate receptor, ionotr (873 aa) initn: 1993 init1: 1993 opt: 1996 Z-score: 2471.5 bits: 466.9 E(): 5.1e-129 Smith-Waterman score: 1996; 99.000% identity (99.000% similar) in 300 aa overlap (7-306:372-671) 10 20 30 hg0423 GCHPPQVGRWEHGVLYMKYPVWPRYSASLQPVVDSR :::::::::::::::::::::::::::::: gi|119 GRDFSFSPGGYLVQPTMVVIALNRHRLWEMVGRWEHGVLYMKYPVWPRYSASLQPVVDSR 350 360 370 380 390 400 40 50 60 70 80 90 hg0423 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI 410 420 430 440 450 460 100 110 120 130 140 150 hg0423 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD 470 480 490 500 510 520 160 170 180 190 200 210 hg0423 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS 530 540 550 560 570 580 220 230 240 250 260 270 hg0423 YNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA 590 600 610 620 630 640 280 290 300 hg0423 SYTANLAAFMIQEQYIDTVSGLSDKKVVGP :::::::::::::::::::::::::: : gi|119 SYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHT 650 660 670 680 690 700 >>gi|26996819|gb|AAH41128.1| Similar to glutamate recept (907 aa) initn: 1993 init1: 1993 opt: 1996 Z-score: 2471.2 bits: 466.9 E(): 5.3e-129 Smith-Waterman score: 1996; 99.000% identity (99.000% similar) in 300 aa overlap (7-306:406-705) 10 20 30 hg0423 GCHPPQVGRWEHGVLYMKYPVWPRYSASLQPVVDSR :::::::::::::::::::::::::::::: gi|269 GRDFSFSPGGYLVQPTMVVIALNRHRLWEMVGRWEHGVLYMKYPVWPRYSASLQPVVDSR 380 390 400 410 420 430 40 50 60 70 80 90 hg0423 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|269 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI 440 450 460 470 480 490 100 110 120 130 140 150 hg0423 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|269 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD 500 510 520 530 540 550 160 170 180 190 200 210 hg0423 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|269 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS 560 570 580 590 600 610 220 230 240 250 260 270 hg0423 YNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|269 YNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA 620 630 640 650 660 670 280 290 300 hg0423 SYTANLAAFMIQEQYIDTVSGLSDKKVVGP :::::::::::::::::::::::::: : gi|269 SYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHT 680 690 700 710 720 730 >>gi|55770854|ref|NP_000826.2| N-methyl-D-aspartate rece (1233 aa) initn: 1993 init1: 1993 opt: 1996 Z-score: 2469.5 bits: 467.0 E(): 6.6e-129 Smith-Waterman score: 1996; 99.000% identity (99.000% similar) in 300 aa overlap (7-306:372-671) 10 20 30 hg0423 GCHPPQVGRWEHGVLYMKYPVWPRYSASLQPVVDSR :::::::::::::::::::::::::::::: gi|557 GRDFSFSPGGYLVQPTMVVIALNRHRLWEMVGRWEHGVLYMKYPVWPRYSASLQPVVDSR 350 360 370 380 390 400 40 50 60 70 80 90 hg0423 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI 410 420 430 440 450 460 100 110 120 130 140 150 hg0423 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD 470 480 490 500 510 520 160 170 180 190 200 210 hg0423 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS 530 540 550 560 570 580 220 230 240 250 260 270 hg0423 YNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 YNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA 590 600 610 620 630 640 280 290 300 hg0423 SYTANLAAFMIQEQYIDTVSGLSDKKVVGP :::::::::::::::::::::::::: : gi|557 SYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHT 650 660 670 680 690 700 >>gi|2492629|sp|Q14957.1|NMDE3_HUMAN Glutamate [NMDA] re (1233 aa) initn: 1993 init1: 1993 opt: 1996 Z-score: 2469.5 bits: 467.0 E(): 6.6e-129 Smith-Waterman score: 1996; 99.000% identity (99.000% similar) in 300 aa overlap (7-306:372-671) 10 20 30 hg0423 GCHPPQVGRWEHGVLYMKYPVWPRYSASLQPVVDSR :::::::::::::::::::::::::::::: gi|249 GRDFSFSPGGYLVQPTMVVIALNRHRLWEMVGRWEHGVLYMKYPVWPRYSASLQPVVDSR 350 360 370 380 390 400 40 50 60 70 80 90 hg0423 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI 410 420 430 440 450 460 100 110 120 130 140 150 hg0423 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD 470 480 490 500 510 520 160 170 180 190 200 210 hg0423 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS 530 540 550 560 570 580 220 230 240 250 260 270 hg0423 YNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|249 YNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA 590 600 610 620 630 640 280 290 300 hg0423 SYTANLAAFMIQEQYIDTVSGLSDKKVVGP :::::::::::::::::::::::::: : gi|249 SYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHT 650 660 670 680 690 700 >>gi|187954965|gb|AAI40802.1| GRIN2C protein [Homo sapie (1236 aa) initn: 1993 init1: 1993 opt: 1996 Z-score: 2469.4 bits: 467.0 E(): 6.6e-129 Smith-Waterman score: 1996; 99.000% identity (99.000% similar) in 300 aa overlap (7-306:372-671) 10 20 30 hg0423 GCHPPQVGRWEHGVLYMKYPVWPRYSASLQPVVDSR :::::::::::::::::::::::::::::: gi|187 GRDFSFSPGGYLVQPTMVVIALNRHRLWEMVGRWEHGVLYMKYPVWPRYSASLQPVVDSR 350 360 370 380 390 400 40 50 60 70 80 90 hg0423 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI 410 420 430 440 450 460 100 110 120 130 140 150 hg0423 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD 470 480 490 500 510 520 160 170 180 190 200 210 hg0423 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS 530 540 550 560 570 580 220 230 240 250 260 270 hg0423 YNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|187 YNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA 590 600 610 620 630 640 280 290 300 hg0423 SYTANLAAFMIQEQYIDTVSGLSDKKVVGP :::::::::::::::::::::::::: : gi|187 SYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHT 650 660 670 680 690 700 >>gi|2444024|gb|AAB71624.1| N-methyl-D-aspartate recepto (1236 aa) initn: 1993 init1: 1993 opt: 1996 Z-score: 2469.4 bits: 467.0 E(): 6.6e-129 Smith-Waterman score: 1996; 99.000% identity (99.000% similar) in 300 aa overlap (7-306:372-671) 10 20 30 hg0423 GCHPPQVGRWEHGVLYMKYPVWPRYSASLQPVVDSR :::::::::::::::::::::::::::::: gi|244 GRDFSFSPGGYLVQPTMVVIALNRHRLWEMVGRWEHGVLYMKYPVWPRYSASLQPVVDSR 350 360 370 380 390 400 40 50 60 70 80 90 hg0423 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI 410 420 430 440 450 460 100 110 120 130 140 150 hg0423 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD 470 480 490 500 510 520 160 170 180 190 200 210 hg0423 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS 530 540 550 560 570 580 220 230 240 250 260 270 hg0423 YNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|244 YNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA 590 600 610 620 630 640 280 290 300 hg0423 SYTANLAAFMIQEQYIDTVSGLSDKKVVGP :::::::::::::::::::::::::: : gi|244 SYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHT 650 660 670 680 690 700 >>gi|119609609|gb|EAW89203.1| glutamate receptor, ionotr (1277 aa) initn: 1993 init1: 1993 opt: 1996 Z-score: 2469.3 bits: 467.1 E(): 6.8e-129 Smith-Waterman score: 1996; 99.000% identity (99.000% similar) in 300 aa overlap (7-306:372-671) 10 20 30 hg0423 GCHPPQVGRWEHGVLYMKYPVWPRYSASLQPVVDSR :::::::::::::::::::::::::::::: gi|119 GRDFSFSPGGYLVQPTMVVIALNRHRLWEMVGRWEHGVLYMKYPVWPRYSASLQPVVDSR 350 360 370 380 390 400 40 50 60 70 80 90 hg0423 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI 410 420 430 440 450 460 100 110 120 130 140 150 hg0423 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD 470 480 490 500 510 520 160 170 180 190 200 210 hg0423 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS 530 540 550 560 570 580 220 230 240 250 260 270 hg0423 YNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA 590 600 610 620 630 640 280 290 300 hg0423 SYTANLAAFMIQEQYIDTVSGLSDKKVVGP :::::::::::::::::::::::::: : gi|119 SYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHT 650 660 670 680 690 700 >>gi|114670370|ref|XP_511665.2| PREDICTED: N-methyl-D-as (1025 aa) initn: 1989 init1: 1989 opt: 1992 Z-score: 2465.6 bits: 466.1 E(): 1.1e-128 Smith-Waterman score: 1992; 98.667% identity (99.000% similar) in 300 aa overlap (7-306:372-671) 10 20 30 hg0423 GCHPPQVGRWEHGVLYMKYPVWPRYSASLQPVVDSR :::::::::::::::::::::::::::::: gi|114 GRDFSFSPGGYQVQPTMVVIALNPQRLWEMVGRWEHGVLYMKYPVWPRYSASLQPVVDSR 350 360 370 380 390 400 40 50 60 70 80 90 hg0423 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI 410 420 430 440 450 460 100 110 120 130 140 150 hg0423 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD 470 480 490 500 510 520 160 170 180 190 200 210 hg0423 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS 530 540 550 560 570 580 220 230 240 250 260 270 hg0423 YNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA ::::::::::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|114 YNQNLTRGKKSGGPSFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA 590 600 610 620 630 640 280 290 300 hg0423 SYTANLAAFMIQEQYIDTVSGLSDKKVVGP :::::::::::::::::::::::::: : gi|114 SYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHT 650 660 670 680 690 700 >>gi|602753|gb|AAC42045.1| N-methyl-D-aspartate receptor (1203 aa) initn: 1965 init1: 1965 opt: 1968 Z-score: 2434.9 bits: 460.6 E(): 5.6e-127 Smith-Waterman score: 1968; 96.333% identity (99.000% similar) in 300 aa overlap (7-306:372-671) 10 20 30 hg0423 GCHPPQVGRWEHGVLYMKYPVWPRYSASLQPVVDSR ::::.:::::::::::::::.::::::::: gi|602 GRDFSFSPGGYLVQPTMVVIALNRHRLWEMVGRWDHGVLYMKYPVWPRYSTSLQPVVDSR 350 360 370 380 390 400 40 50 60 70 80 90 hg0423 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDI ::::::::::::::::::::::::::::::::::::::::::::..:::::::::::::: gi|602 HLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDITPYTKLCCKGFCIDI 410 420 430 440 450 460 100 110 120 130 140 150 hg0423 LKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVD :::::.::::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|602 LKKLAKVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIID 470 480 490 500 510 520 160 170 180 190 200 210 hg0423 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|602 FSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVS 530 540 550 560 570 580 220 230 240 250 260 270 hg0423 YNQNLTRGKKSGGPAFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA ::::::.:::::::.::::::::::::::::::::::::::::::::::::::::::::: gi|602 YNQNLTKGKKSGGPSFTIGKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLA 590 600 610 620 630 640 280 290 300 hg0423 SYTANLAAFMIQEQYIDTVSGLSDKKVVGP :::::::::::::::::::::::::: : gi|602 SYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHT 650 660 670 680 690 700 306 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 03:51:31 2008 done: Tue Aug 12 03:54:08 2008 Total Scan time: 735.630 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]