# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohg04315.fasta.nr -Q hg04315.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hg04315, 320 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6842265 sequences Expectation_n fit: rho(ln(x))= 4.7206+/-0.000179; mu= 11.6244+/- 0.010 mean_var=59.0145+/-11.418, 0's: 34 Z-trim: 41 B-trim: 0 in 0/65 Lambda= 0.166953 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087626|dbj|BAD92260.1| Rab geranylgeranyltran ( 320) 2191 535.8 3.5e-150 gi|2506788|sp|P53611.2|PGTB2_HUMAN Geranylgeranyl ( 331) 1975 483.8 1.6e-134 gi|1216504|gb|AAA91473.1| geranylgeranyl transfera ( 331) 1971 482.9 3.2e-134 gi|1552549|emb|CAA69383.1| rab geranylgeranyl tran ( 331) 1957 479.5 3.3e-133 gi|75052658|sp|Q5E9B3.1|PGTB2_BOVIN Geranylgeranyl ( 331) 1951 478.1 9e-133 gi|73960159|ref|XP_855504.1| PREDICTED: similar to ( 486) 1945 476.7 3.3e-132 gi|194211198|ref|XP_001497434.2| PREDICTED: simila ( 415) 1933 473.8 2.2e-131 gi|74227618|dbj|BAE35665.1| unnamed protein produc ( 331) 1909 467.9 9.9e-130 gi|730317|sp|Q08603.1|PGTB2_RAT Geranylgeranyl tra ( 331) 1905 467.0 1.9e-129 gi|51261120|gb|AAH78683.1| RAB geranylgeranyl tran ( 331) 1905 467.0 1.9e-129 gi|124376078|gb|AAI32474.1| RAB geranylgeranyl tra ( 339) 1902 466.3 3.3e-129 gi|38051886|gb|AAH60536.1| Rabggtb protein [Rattus ( 343) 1901 466.0 3.9e-129 gi|149599137|ref|XP_001520156.1| PREDICTED: simila ( 347) 1864 457.1 1.9e-126 gi|1730529|sp|P53612.1|PGTB2_MOUSE Geranylgeranyl ( 339) 1852 454.2 1.4e-125 gi|118094772|ref|XP_422548.2| PREDICTED: similar t ( 331) 1851 454.0 1.6e-125 gi|160774445|gb|AAI55528.1| Unknown (protein for M ( 331) 1845 452.5 4.3e-125 gi|58833394|gb|AAH90236.1| MGC85147 protein [Xenop ( 331) 1838 450.8 1.4e-124 gi|66911331|gb|AAH97066.1| Zgc:56443 [Danio rerio] ( 331) 1815 445.3 6.5e-123 gi|119626801|gb|EAX06396.1| Rab geranylgeranyltran ( 267) 1705 418.7 5.2e-115 gi|119626800|gb|EAX06395.1| Rab geranylgeranyltran ( 291) 1705 418.8 5.6e-115 gi|74008557|ref|XP_852915.1| PREDICTED: similar to ( 265) 1683 413.4 2e-113 gi|148679951|gb|EDL11898.1| RAB geranylgeranyl tra ( 291) 1656 407.0 2e-111 gi|149026281|gb|EDL82524.1| RAB geranylgeranyl tra ( 291) 1652 406.0 3.9e-111 gi|115683324|ref|XP_001176818.1| PREDICTED: hypoth ( 333) 1587 390.4 2.2e-106 gi|156545559|ref|XP_001606562.1| PREDICTED: hypoth ( 332) 1489 366.8 2.8e-99 gi|91094707|ref|XP_969750.1| PREDICTED: similar to ( 333) 1394 343.9 2.2e-92 gi|108883319|gb|EAT47544.1| geranylgeranyl transfe ( 332) 1375 339.3 5.2e-91 gi|167875006|gb|EDS38389.1| geranylgeranyl transfe ( 333) 1347 332.6 5.6e-89 gi|194173852|gb|EDW87463.1| GE18191 [Drosophila ya ( 342) 1324 327.0 2.7e-87 gi|193913349|gb|EDW12216.1| GI11182 [Drosophila mo ( 341) 1319 325.8 6.1e-87 gi|190660356|gb|EDV57548.1| GG24898 [Drosophila er ( 345) 1317 325.4 8.6e-87 gi|194141441|gb|EDW57860.1| GJ18324 [Drosophila vi ( 345) 1316 325.1 1e-86 gi|190615179|gb|EDV30703.1| GF14990 [Drosophila an ( 341) 1313 324.4 1.7e-86 gi|4927184|gb|AAD33042.1|AF133269_1 geranylgeranyl ( 347) 1311 323.9 2.4e-86 gi|194132504|gb|EDW54072.1| GM18378 [Drosophila se ( 346) 1309 323.4 3.3e-86 gi|193904222|gb|EDW03089.1| GH10686 [Drosophila gr ( 342) 1307 322.9 4.6e-86 gi|194163028|gb|EDW77929.1| GK24285 [Drosophila wi ( 347) 1302 321.7 1.1e-85 gi|54644472|gb|EAL33213.1| GA15021-PA [Drosophila ( 342) 1291 319.1 6.6e-85 gi|147860391|emb|CAN82570.1| hypothetical protein ( 317) 1282 316.9 2.8e-84 gi|12846318|dbj|BAB27122.1| unnamed protein produc ( 237) 1274 314.9 8.4e-84 gi|190587572|gb|EDV27614.1| hypothetical protein T ( 399) 1269 313.8 2.9e-83 gi|34148075|gb|AAQ62584.1| putative Rab geranylger ( 317) 1263 312.3 6.6e-83 gi|147821440|emb|CAN74579.1| hypothetical protein ( 317) 1261 311.8 9.3e-83 gi|116787766|gb|ABK24633.1| unknown [Picea sitchen ( 318) 1254 310.2 3e-82 gi|162675186|gb|EDQ61684.1| predicted protein [Phy ( 319) 1245 308.0 1.3e-81 gi|149026285|gb|EDL82528.1| RAB geranylgeranyl tra ( 243) 1232 304.8 9.5e-81 gi|193613282|ref|XP_001944304.1| PREDICTED: simila ( 330) 1218 301.5 1.3e-79 gi|162690089|gb|EDQ76458.1| predicted protein [Phy ( 317) 1216 301.0 1.7e-79 gi|9759388|dbj|BAB10039.1| Rab geranylgeranyltrans ( 313) 1215 300.8 2e-79 gi|28466947|gb|AAO44082.1| At5g12210 [Arabidopsis ( 321) 1215 300.8 2e-79 >>gi|62087626|dbj|BAD92260.1| Rab geranylgeranyltransfer (320 aa) initn: 2191 init1: 2191 opt: 2191 Z-score: 2851.5 bits: 535.8 E(): 3.5e-150 Smith-Waterman score: 2191; 100.000% identity (100.000% similar) in 320 aa overlap (1-320:1-320) 10 20 30 40 50 60 hg0431 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 10 20 30 40 50 60 70 80 90 100 110 120 hg0431 GQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 GQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVV 70 80 90 100 110 120 130 140 150 160 170 180 hg0431 EYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 EYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGG 130 140 150 160 170 180 190 200 210 220 230 240 hg0431 FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC 190 200 210 220 230 240 250 260 270 280 290 300 hg0431 YSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMHFIYQNYPKKELSSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 YSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMHFIYQNYPKKELSSN 250 260 270 280 290 300 310 320 hg0431 KETLTESLLPRLERSSTISA :::::::::::::::::::: gi|620 KETLTESLLPRLERSSTISA 310 320 >>gi|2506788|sp|P53611.2|PGTB2_HUMAN Geranylgeranyl tran (331 aa) initn: 1975 init1: 1975 opt: 1975 Z-score: 2570.1 bits: 483.8 E(): 1.6e-134 Smith-Waterman score: 1975; 100.000% identity (100.000% similar) in 285 aa overlap (1-285:1-285) 10 20 30 40 50 60 hg0431 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 10 20 30 40 50 60 70 80 90 100 110 120 hg0431 GQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 GQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVV 70 80 90 100 110 120 130 140 150 160 170 180 hg0431 EYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 EYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGG 130 140 150 160 170 180 190 200 210 220 230 240 hg0431 FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC 190 200 210 220 230 240 250 260 270 280 290 300 hg0431 YSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMHFIYQNYPKKELSSN ::::::::::::::::::::::::::::::::::::::::::::: gi|250 YSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSL 250 260 270 280 290 300 310 320 hg0431 KETLTESLLPRLERSSTISA gi|250 LGEEQIKPVNPVFCMPEEVLQRVNVQPELVS 310 320 330 >>gi|1216504|gb|AAA91473.1| geranylgeranyl transferase t (331 aa) initn: 1971 init1: 1971 opt: 1971 Z-score: 2564.9 bits: 482.9 E(): 3.2e-134 Smith-Waterman score: 1971; 99.649% identity (100.000% similar) in 285 aa overlap (1-285:1-285) 10 20 30 40 50 60 hg0431 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|121 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 10 20 30 40 50 60 70 80 90 100 110 120 hg0431 GQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|121 GQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVV 70 80 90 100 110 120 130 140 150 160 170 180 hg0431 EYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGG ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: gi|121 EYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATFALLGKLDAINVEKAIEFVLSCMNFDGG 130 140 150 160 170 180 190 200 210 220 230 240 hg0431 FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|121 FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC 190 200 210 220 230 240 250 260 270 280 290 300 hg0431 YSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMHFIYQNYPKKELSSN ::::::::::::::::::::::::::::::::::::::::::::: gi|121 YSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSL 250 260 270 280 290 300 310 320 hg0431 KETLTESLLPRLERSSTISA gi|121 LGEEQIKPVNPVFCMPEEVLQRVNVQPELVS 310 320 330 >>gi|1552549|emb|CAA69383.1| rab geranylgeranyl transfer (331 aa) initn: 1957 init1: 1957 opt: 1957 Z-score: 2546.7 bits: 479.5 E(): 3.3e-133 Smith-Waterman score: 1957; 99.298% identity (99.649% similar) in 285 aa overlap (1-285:1-285) 10 20 30 40 50 60 hg0431 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|155 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 10 20 30 40 50 60 70 80 90 100 110 120 hg0431 GQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|155 GQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVV 70 80 90 100 110 120 130 140 150 160 170 180 hg0431 EYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: gi|155 EYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNSDGG 130 140 150 160 170 180 190 200 210 220 230 240 hg0431 FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC ::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::: gi|155 FGCRPGSESHAGQIYCCTGFLAITSQLHQVTSDLLGWWLCERQLPSGGLNGRPEKLPDVC 190 200 210 220 230 240 250 260 270 280 290 300 hg0431 YSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMHFIYQNYPKKELSSN ::::::::::::::::::::::::::::::::::::::::::::: gi|155 YSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSL 250 260 270 280 290 300 310 320 hg0431 KETLTESLLPRLERSSTISA gi|155 LGEEQIKPVNPVFCMPEEVLQRVNVQPELVS 310 320 330 >>gi|75052658|sp|Q5E9B3.1|PGTB2_BOVIN Geranylgeranyl tra (331 aa) initn: 1951 init1: 1951 opt: 1951 Z-score: 2538.9 bits: 478.1 E(): 9e-133 Smith-Waterman score: 1951; 98.246% identity (100.000% similar) in 285 aa overlap (1-285:1-285) 10 20 30 40 50 60 hg0431 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 10 20 30 40 50 60 70 80 90 100 110 120 hg0431 GQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVV ::::::::::::.::::::::::::::::::::::::::::::::::::::::::.:::: gi|750 GQLHRMNREEILTFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDINKVV 70 80 90 100 110 120 130 140 150 160 170 180 hg0431 EYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGG :::..::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 EYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGG 130 140 150 160 170 180 190 200 210 220 230 240 hg0431 FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC 190 200 210 220 230 240 250 260 270 280 290 300 hg0431 YSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMHFIYQNYPKKELSSN ::::::::::::::::::::::::.:::::::::::::::::::: gi|750 YSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSL 250 260 270 280 290 300 310 320 hg0431 KETLTESLLPRLERSSTISA gi|750 LGEEQIKPVSPVFCMPEEVLRRVNVQPELVS 310 320 330 >>gi|73960159|ref|XP_855504.1| PREDICTED: similar to Rab (486 aa) initn: 1945 init1: 1945 opt: 1945 Z-score: 2528.7 bits: 476.7 E(): 3.3e-132 Smith-Waterman score: 1945; 98.592% identity (100.000% similar) in 284 aa overlap (2-285:157-440) 10 20 30 hg0431 MGTPQKDVIIKSDAPDTLLLEKHADYIASYG :::::::::::::::::::::::::::::: gi|739 ERESGSGLLSEREAAAEEGENGLGSMMSWHGTPQKDVIIKSDAPDTLLLEKHADYIASYG 130 140 150 160 170 180 40 50 60 70 80 90 hg0431 SKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGH :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|739 SKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILTFIKSCQHECGGISASIGH 190 200 210 220 230 240 100 110 120 130 140 150 hg0431 DPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVA ::::::::::::::::::::::::::::::::..:::::::::::::::::::::::::: gi|739 DPHLLYTLSAVQILTLYDSINVIDVNKVVEYVQSLQKEDGSFAGDIWGEIDTRFSFCAVA 250 260 270 280 290 300 160 170 180 190 200 210 hg0431 TLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVN 310 320 330 340 350 360 220 230 240 250 260 270 hg0431 SDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQ :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|739 SDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQ 370 380 390 400 410 420 280 290 300 310 320 hg0431 DEETGGFADRPGDMHFIYQNYPKKELSSNKETLTESLLPRLERSSTISA :::::::::::::: gi|739 DEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKPVSPVFCMPEEVLRRVNVQPELVS 430 440 450 460 470 480 >>gi|194211198|ref|XP_001497434.2| PREDICTED: similar to (415 aa) initn: 1933 init1: 1933 opt: 1933 Z-score: 2514.1 bits: 473.8 E(): 2.2e-131 Smith-Waterman score: 1933; 97.887% identity (99.296% similar) in 284 aa overlap (2-285:86-369) 10 20 30 hg0431 MGTPQKDVIIKSDAPDTLLLEKHADYIASYG ::::::::::::::: :::::::::::::: gi|194 VAASHFTQASSYPAGLGIQQPDFLIPQRSQGTPQKDVIIKSDAPDILLLEKHADYIASYG 60 70 80 90 100 110 40 50 60 70 80 90 hg0431 SKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISASIGH :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|194 SKKDDYEYCMSEYLRMSGIYWGLTVMDLMGQLHRMNREEILTFIKSCQHECGGISASIGH 120 130 140 150 160 170 100 110 120 130 140 150 hg0431 DPHLLYTLSAVQILTLYDSINVIDVNKVVEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVA ::::::::::::::::::::::::::::::::..::::::::::: :::::::::::::: gi|194 DPHLLYTLSAVQILTLYDSINVIDVNKVVEYVQSLQKEDGSFAGDTWGEIDTRFSFCAVA 180 190 200 210 220 230 160 170 180 190 200 210 hg0431 TLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TLALLGKLDAINVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCTGFLAITSQLHQVN 240 250 260 270 280 290 220 230 240 250 260 270 hg0431 SDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRNFILACQ :::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::: gi|194 SDLLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLKIIGRLHWIDREKLRSFILACQ 300 310 320 330 340 350 280 290 300 310 320 hg0431 DEETGGFADRPGDMHFIYQNYPKKELSSNKETLTESLLPRLERSSTISA :::::::::::::: gi|194 DEETGGFADRPGDMVDPFHTLFGIAGLSLLGEEQIKPVSPVFCMPEEVLRRMNVQPELVS 360 370 380 390 400 410 >>gi|74227618|dbj|BAE35665.1| unnamed protein product [M (331 aa) initn: 1909 init1: 1909 opt: 1909 Z-score: 2484.2 bits: 467.9 E(): 9.9e-130 Smith-Waterman score: 1909; 95.789% identity (98.947% similar) in 285 aa overlap (1-285:1-285) 10 20 30 40 50 60 hg0431 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM ::: :::: ::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|742 MGTQQKDVTIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLM 10 20 30 40 50 60 70 80 90 100 110 120 hg0431 GQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVV ::::::::::::.:::::::::::::::::::::::::::::::::::::..::.:.::: gi|742 GQLHRMNREEILVFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSVHVINVDKVV 70 80 90 100 110 120 130 140 150 160 170 180 hg0431 EYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGG ::..::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 AYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGG 130 140 150 160 170 180 190 200 210 220 230 240 hg0431 FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|742 FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC 190 200 210 220 230 240 250 260 270 280 290 300 hg0431 YSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMHFIYQNYPKKELSSN ::::::::::::::::::::::::.:::::::::::::::::::: gi|742 YSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSL 250 260 270 280 290 300 310 320 hg0431 KETLTESLLPRLERSSTISA gi|742 LGEEQIKPVSPVFCMPEEVLQRVNVQPELVS 310 320 330 >>gi|730317|sp|Q08603.1|PGTB2_RAT Geranylgeranyl transfe (331 aa) initn: 1905 init1: 1905 opt: 1905 Z-score: 2479.0 bits: 467.0 E(): 1.9e-129 Smith-Waterman score: 1905; 95.439% identity (98.947% similar) in 285 aa overlap (1-285:1-285) 10 20 30 40 50 60 hg0431 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM ::: :::: ::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|730 MGTQQKDVTIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLM 10 20 30 40 50 60 70 80 90 100 110 120 hg0431 GQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVV :::::::.::::.:::::::::::.::::::::::::::::::::::::::.::.:.::: gi|730 GQLHRMNKEEILVFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVV 70 80 90 100 110 120 130 140 150 160 170 180 hg0431 EYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGG ::..::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|730 AYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGG 130 140 150 160 170 180 190 200 210 220 230 240 hg0431 FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|730 FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC 190 200 210 220 230 240 250 260 270 280 290 300 hg0431 YSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMHFIYQNYPKKELSSN ::::::::::::::::::::::::.:::::::::::::::::::: gi|730 YSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSL 250 260 270 280 290 300 310 320 hg0431 KETLTESLLPRLERSSTISA gi|730 LGEEQIKPVSPVFCMPEEVLQRVNVQPELVS 310 320 330 >>gi|51261120|gb|AAH78683.1| RAB geranylgeranyl transfer (331 aa) initn: 1905 init1: 1905 opt: 1905 Z-score: 2479.0 bits: 467.0 E(): 1.9e-129 Smith-Waterman score: 1905; 95.439% identity (98.947% similar) in 285 aa overlap (1-285:1-285) 10 20 30 40 50 60 hg0431 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM ::: :::: ::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|512 MGTQQKDVTIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGVYWGLTVMDLM 10 20 30 40 50 60 70 80 90 100 110 120 hg0431 GQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKVV :::::::.::::.:::::::::::.::::::::::::::::::::::::::.::.:.::: gi|512 GQLHRMNKEEILVFIKSCQHECGGVSASIGHDPHLLYTLSAVQILTLYDSIHVINVDKVV 70 80 90 100 110 120 130 140 150 160 170 180 hg0431 EYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGG ::..::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 AYVQSLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDGG 130 140 150 160 170 180 190 200 210 220 230 240 hg0431 FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|512 FGCRPGSESHAGQIYCCTGFLAITSQLHQVNSDLLGWWLCERQLPSGGLNGRPEKLPDVC 190 200 210 220 230 240 250 260 270 280 290 300 hg0431 YSWWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMHFIYQNYPKKELSSN ::::::::::::::::::::::::.:::::::::::::::::::: gi|512 YSWWVLASLKIIGRLHWIDREKLRSFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSL 250 260 270 280 290 300 310 320 hg0431 KETLTESLLPRLERSSTISA gi|512 LGEEQIKPVSPVFCMPEDVLQRVNVQPELVS 310 320 330 320 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 04:05:06 2008 done: Tue Aug 12 04:07:43 2008 Total Scan time: 755.870 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]