hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-05080910/chunk_1/iprscan-20080812-05080910.nocrc
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Query sequence: hh00332
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF07690.6.fs Major Facilitator Superfamily                   37.4    2.3e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF07690.6.fs   1/1      29   162 ..   131   260 ..    37.4  2.3e-10

Alignments of top-scoring domains:
PF07690.6.fs: domain 1 of 1, from 29 to 162: score 37.4, E = 2.3e-10
                   *->fppeergralgivsagfglGaalggpllggllaalgwwwssgtfWra
                      f p++ g + +i+s++++l++ lg++l+  l+ +++w        r+
     hh00332    29    FEPSQFGTWWAILSTSMNLAGGLGPILATILAQSYSW--------RS 67   

                   aFlilgilallaallllvlfllpeppakasgkpeeeeagi..........
                   +  ++g+l++++ +l   l+l+ ++pa    +  +    ++++++ ++++
     hh00332    68 TLALSGALCVVVSFL--CLLLIHNEPADVGLRNLDPMPSEgkkgslkees 115  

                   alr.lll.p.lllillalflllaaflalltflplylllpllls.sag<-*
                    l++lll+p l+ +   +++++++ +  + +  ++l +  + s ++g   
     hh00332   116 TLQeLLLsPyLWVLSTGYLVVFGVKTCCTDWGQFFLIQEKGQSaLVG    162  

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