hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-05254355/chunk_1/iprscan-20080812-05254355.nocrc
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Query sequence: hh00615
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
PF00069.15.fs Protein kinase domain                       159.1    4.5e-45   1
PF00069.15.ls Protein kinase domain                       158.4    1.7e-44   1
PF07714.7.fs Protein tyrosine kinase                      68.6    8.4e-20   2

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
PF00069.15.fs   1/1      22   247 ..     1   236 [.   159.1  4.5e-45
PF07714.7.fs   1/2      22    82 ..     1    69 [.    33.7  1.1e-09
PF00069.15.ls   1/1      22   314 ..     1   287 []   158.4  1.7e-44
PF07714.7.fs   2/2      96   152 ..    84   139 ..    34.9  4.9e-10

Alignments of top-scoring domains:
PF00069.15.fs: domain 1 of 1, from 22 to 247: score 159.1, E = 4.5e-45
                   *->yelleklGsGsfGtVykakhkgtgkiVAvK....iikkrkekskkdk
                      +e  e+lG G+fG V++ +h+    + A+K+ + +++ ++++ +++ 
     hh00615    22    WEMRERLGTGGFGNVCLYQHRELDLKIAIKscrlELSTKNRERWCH- 67   

                   tarrlsEiqilkrLsHpNIvrlidvfed.....kdhlylVlEycegGLrv
                         Eiqi+k+L+H N+v+  dv e+ +   +d + l +Eyc gG   
     hh00615    68 ------EIQIMKKLNHANVVKACDVPEElniliHDVPLLAMEYCSGG--- 108  

                   ldLfdylsetrrkgp..llfsedeakkialQilrgleYLHsngiiHRDLK
                    dL  +l   + +++ +l   e ++ + +  i +g+ YLH+n+iiHRDLK
     hh00615   109 -DLRKLLN--KPENCcgL--KESQILSLLSDIGSGIRYLHENKIIHRDLK 153  

                   PeNILldnngvvdafl..KiaDFGlAkklst.sss.lttfvGTpwYmAPE
                   PeNI l + g     + +Ki+D G Ak    + +s +t+fvGT+ Y+APE
     hh00615   154 PENIVLQDVGGK---IihKIIDLGYAKD--VdQGSlCTSFVGTLQYLAPE 198  

                   vllggngygtkvDvWSlGvilyelltGkpPFsgevqdsldqlqlirkilg
                   +   +++y+  vD WS+G +++e + G+ PF ++    l ++  ++ki++
     hh00615   199 LFE-NKPYTATVDYWSFGTMVFECIAGYRPFLHH----LQPFTWHEKIKK 243  

                   pple<-*
                   ++++   
     hh00615   244 KDPK    247  

PF07714.7.fs: domain 1 of 2, from 22 to 82: score 33.7, E = 1.1e-09
                   *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei
                       ++ + LG G FG+V++   +    + ++k A+K+++ e  ++    
     hh00615    22    WEMRERLGTGGFGNVCLYQHR----ELDLKIAIKSCrLE-LSTKN-- 61   

                   eredFlrEAsiMkklGdHpNiVr<-*
                    re   +E++iMkkl +H N+V+   
     hh00615    62 -RERWCHEIQIMKKL-NHANVVK    82   

PF00069.15.ls: domain 1 of 1, from 22 to 314: score 158.4, E = 1.7e-44
                   *->yelleklGsGsfGtVykakhkgtgkiVAvK....iikkrkekskkdk
                      +e  e+lG G+fG V++ +h+    + A+K+ + +++ ++++ +++ 
     hh00615    22    WEMRERLGTGGFGNVCLYQHRELDLKIAIKscrlELSTKNRERWCH- 67   

                   tarrlsEiqilkrLsHpNIvrlidvfed.....kdhlylVlEycegGLrv
                         Eiqi+k+L+H N+v+  dv e+ +   +d + l +Eyc gG   
     hh00615    68 ------EIQIMKKLNHANVVKACDVPEElniliHDVPLLAMEYCSGG--- 108  

                   ldLfdylsetrrkgp..llfsedeakkialQilrgleYLHsngiiHRDLK
                    dL  +l   + +++ +l   e ++ + +  i +g+ YLH+n+iiHRDLK
     hh00615   109 -DLRKLLN--KPENCcgL--KESQILSLLSDIGSGIRYLHENKIIHRDLK 153  

                   PeNILldnngvvdafl..KiaDFGlAkklst.sss.lttfvGTpwYmAPE
                   PeNI l + g     + +Ki+D G Ak    + +s +t+fvGT+ Y+APE
     hh00615   154 PENIVLQDVGGK---IihKIIDLGYAKD--VdQGSlCTSFVGTLQYLAPE 198  

                   vllggngygtkvDvWSlGvilyelltGkpPFsgevqdsldqlqlirkilg
                   +   +++y+  vD WS+G +++e + G+ PF ++    l ++  ++ki++
     hh00615   199 LFE-NKPYTATVDYWSFGTMVFECIAGYRPFLHH----LQPFTWHEKIKK 243  

                   pplefdspewdsisrse.fr.......r.l.pnlseeakdLikkcLnkDP
                      +  +   ++++  e +++++ +++ +l  ++ e++   +  +Ln+DP
     hh00615   244 --KDPKCIFACEEMSGEvRFsshlpqpNsLcSLVVEPMENWLQLMLNWDP 291  

                   skRlt..........aeeilqHPwf<-*
                   ++R ++ + + +++++  ++ H  +   
     hh00615   292 QQRGGpvdltlkqprCFVLMDH--I    314  

PF07714.7.fs: domain 2 of 2, from 96 to 152: score 34.9, E = 4.9e-10
                   *->g.lyiVtEymegGdLldfLrkhregrpLtlkd..LlsfalQiAkGMe
                      + +++ +Ey+ gGdL++ L k+  ++   lk++++ls   +i +G  
     hh00615    96    DvPLLAMEYCSGGDLRKLLNKP--ENCCGLKEsqILSLLSDIGSGIR 140  

                   YLesknfvHRDL<-*
                   YL++++++HRDL   
     hh00615   141 YLHENKIIHRDL    152  

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