# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohh00720.fasta.nr -Q hh00720.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hh00720, 304 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6830067 sequences Expectation_n fit: rho(ln(x))= 6.2461+/-0.000198; mu= 4.7412+/- 0.011 mean_var=106.6513+/-21.029, 0's: 33 Z-trim: 88 B-trim: 1310 in 1/65 Lambda= 0.124191 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087232|dbj|BAD92063.1| ataxin 2-binding prote ( 303) 2044 376.3 3.3e-102 gi|55729973|emb|CAH91712.1| hypothetical protein [ ( 466) 2022 372.5 7.1e-101 gi|55725986|emb|CAH89770.1| hypothetical protein [ ( 374) 1754 324.4 1.7e-86 gi|75070340|sp|Q5NVN8.1|FOX1_PONAB Fox-1 homolog ( ( 382) 1754 324.4 1.7e-86 gi|166897979|sp|Q9NWB1.2|FOX1_HUMAN Fox-1 homolog ( 397) 1754 324.4 1.8e-86 gi|57997103|emb|CAD28499.2| hypothetical protein [ ( 262) 1749 323.4 2.4e-86 gi|7022046|dbj|BAA91472.1| unnamed protein product ( 397) 1749 323.5 3.3e-86 gi|149750968|ref|XP_001502609.1| PREDICTED: simila ( 397) 1737 321.4 1.5e-85 gi|56122428|gb|AAV74338.1| ataxin-2 binding protei ( 373) 1708 316.2 5.2e-84 gi|166898081|sp|Q9JJ43.3|FOX1_MOUSE Fox-1 homolog ( 396) 1708 316.2 5.4e-84 gi|7670456|dbj|BAA95079.1| RNA-binding protein [Mu ( 396) 1703 315.3 1e-83 gi|114660869|ref|XP_001135062.1| PREDICTED: ataxin ( 399) 1698 314.4 1.9e-83 gi|109127496|ref|XP_001100488.1| PREDICTED: simila ( 322) 1695 313.8 2.3e-83 gi|19032366|gb|AAL83405.1|AF094849_1 hexaribonucle ( 392) 1692 313.3 3.9e-83 gi|19032368|gb|AAL83406.1|AF109106_1 hexaribonucle ( 395) 1692 313.3 3.9e-83 gi|18461367|gb|AAL71904.1|AF229057_1 hexaribonucle ( 418) 1692 313.3 4.1e-83 gi|109127498|ref|XP_001100586.1| PREDICTED: simila ( 317) 1688 312.5 5.5e-83 gi|75073784|sp|Q95KI0.1|FOX1_MACFA Fox-1 homolog ( ( 376) 1686 312.2 8e-83 gi|73958971|ref|XP_863750.1| PREDICTED: similar to ( 392) 1681 311.3 1.5e-82 gi|73958973|ref|XP_863775.1| PREDICTED: similar to ( 395) 1681 311.4 1.5e-82 gi|73958975|ref|XP_851461.1| PREDICTED: similar to ( 418) 1681 311.4 1.6e-82 gi|149750962|ref|XP_001502620.1| PREDICTED: simila ( 392) 1675 310.3 3.2e-82 gi|149750966|ref|XP_001502628.1| PREDICTED: simila ( 395) 1675 310.3 3.3e-82 gi|149750964|ref|XP_001502614.1| PREDICTED: simila ( 418) 1675 310.3 3.4e-82 gi|95768990|gb|ABF57397.1| ataxin 2-binding protei ( 283) 1668 308.9 6e-82 gi|118098101|ref|XP_414942.2| PREDICTED: similar t ( 397) 1654 306.5 4.4e-81 gi|164565398|ref|NP_001100444.2| ataxin 2 binding ( 416) 1648 305.5 9.7e-81 gi|56122432|gb|AAV74340.1| ataxin-2 binding protei ( 394) 1647 305.3 1.1e-80 gi|56122430|gb|AAV74339.1| ataxin-2 binding protei ( 417) 1647 305.3 1.1e-80 gi|126334685|ref|XP_001367159.1| PREDICTED: simila ( 392) 1646 305.1 1.2e-80 gi|126334687|ref|XP_001367203.1| PREDICTED: simila ( 418) 1646 305.1 1.2e-80 gi|114660871|ref|XP_001135143.1| PREDICTED: simila ( 438) 1646 305.1 1.3e-80 gi|19032414|gb|AAL83425.1|AF191501_1 hexaribonucle ( 417) 1644 304.7 1.6e-80 gi|114660875|ref|XP_001135213.1| PREDICTED: ataxin ( 419) 1636 303.3 4.3e-80 gi|114660877|ref|XP_510799.2| PREDICTED: ataxin 2- ( 421) 1636 303.3 4.3e-80 gi|149409262|ref|XP_001506559.1| PREDICTED: simila ( 392) 1623 301.0 2.1e-79 gi|149409264|ref|XP_001506526.1| PREDICTED: simila ( 418) 1623 301.0 2.2e-79 gi|119605624|gb|EAW85218.1| ataxin 2-binding prote ( 352) 1618 300.0 3.5e-79 gi|119605626|gb|EAW85220.1| ataxin 2-binding prote ( 354) 1618 300.0 3.5e-79 gi|119605625|gb|EAW85219.1| ataxin 2-binding prote ( 355) 1618 300.0 3.6e-79 gi|8671586|gb|AAF78291.1|AF107203_1 ataxin 2-bindi ( 377) 1618 300.0 3.7e-79 gi|119605623|gb|EAW85217.1| ataxin 2-binding prote ( 378) 1618 300.0 3.7e-79 gi|114660879|ref|XP_001134966.1| PREDICTED: simila ( 379) 1562 290.0 3.9e-76 gi|8671588|gb|AAF78292.1|AF107204_1 ataxin 2-bindi ( 378) 1558 289.3 6.4e-76 gi|30911059|gb|AAP41925.1|AF448859_1 ataxin 2-bind ( 370) 1509 280.5 2.8e-73 gi|149750970|ref|XP_001502643.1| PREDICTED: simila ( 370) 1495 278.0 1.6e-72 gi|109127500|ref|XP_001100392.1| PREDICTED: simila ( 290) 1443 268.6 8.3e-70 gi|114660873|ref|XP_001134803.1| PREDICTED: ataxin ( 389) 1442 268.5 1.2e-69 gi|74147887|dbj|BAE22304.1| unnamed protein produc ( 378) 1348 251.7 1.4e-64 gi|126334689|ref|XP_001367251.1| PREDICTED: simila ( 325) 1342 250.5 2.6e-64 >>gi|62087232|dbj|BAD92063.1| ataxin 2-binding protein 1 (303 aa) initn: 2044 init1: 2044 opt: 2044 Z-score: 1990.1 bits: 376.3 E(): 3.3e-102 Smith-Waterman score: 2044; 100.000% identity (100.000% similar) in 303 aa overlap (1-303:1-303) 10 20 30 40 50 60 hh0072 ETGQRTHASGTYSFLDRTQHSDIKADCNTCVEIEDRKVSRQQMNCEREQLRGNQEAAAAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ETGQRTHASGTYSFLDRTQHSDIKADCNTCVEIEDRKVSRQQMNCEREQLRGNQEAAAAP 10 20 30 40 50 60 70 80 90 100 110 120 hh0072 DTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPA 70 80 90 100 110 120 130 140 150 160 170 180 hh0072 DTSAQTVSGTATTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 DTSAQTVSGTATTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQ 130 140 150 160 170 180 190 200 210 220 230 240 hh0072 FGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 FGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNK 190 200 210 220 230 240 250 260 270 280 290 300 hh0072 KTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 KTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYP 250 260 270 280 290 300 hh0072 AATA ::: gi|620 AAT >>gi|55729973|emb|CAH91712.1| hypothetical protein [Pong (466 aa) initn: 1164 init1: 1140 opt: 2022 Z-score: 1966.2 bits: 372.5 E(): 7.1e-101 Smith-Waterman score: 2022; 99.016% identity (99.344% similar) in 305 aa overlap (1-304:2-306) 10 20 30 40 50 hh0072 ETGQRTHASGTYSFLDRTQHSDIKADCNTCVEIEDRKVSRQQMNCEREQLRGNQEAAAA :::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: gi|557 METGQRTHASGTYSFLDRTQHSDIKADCSTCVEIEDRKVSRQQMNCEREQLRGNQEAAAA 10 20 30 40 50 60 60 70 80 90 100 110 hh0072 PDTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 PDTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSP 70 80 90 100 110 120 120 130 140 150 160 170 hh0072 ADTSAQTVSGTAT-TDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMF ::::::::::::: :::::::::::::::::::::::::::::::::::::::::::::: gi|557 ADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMF 130 140 150 160 170 180 180 190 200 210 220 230 hh0072 GQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT :::::::::::::: ::::::::::::::::::::::::::::::::::::::::::::: gi|557 GQFGKILDVEIIFNGRGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMT 190 200 210 220 230 240 240 250 260 270 280 290 hh0072 NKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 NKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFP 250 260 270 280 290 300 300 hh0072 YPAATA :::::: gi|557 YPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYR 310 320 330 340 350 360 >>gi|55725986|emb|CAH89770.1| hypothetical protein [Pong (374 aa) initn: 1173 init1: 1149 opt: 1754 Z-score: 1708.0 bits: 324.4 E(): 1.7e-86 Smith-Waterman score: 1754; 99.620% identity (99.620% similar) in 263 aa overlap (43-304:1-263) 20 30 40 50 60 70 hh0072 SFLDRTQHSDIKADCNTCVEIEDRKVSRQQMNCEREQLRGNQEAAAAPDTMAQPYASAQF :::::::::::::::::::::::::::::: gi|557 MNCEREQLRGNQEAAAAPDTMAQPYASAQF 10 20 30 80 90 100 110 120 130 hh0072 APPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 APPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTAT 40 50 60 70 80 90 140 150 160 170 180 190 hh0072 -TDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 QTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 100 110 120 130 140 150 200 210 220 230 240 250 hh0072 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWK 160 170 180 190 200 210 260 270 280 290 300 hh0072 LNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATA ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 LNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATAAAAYRGA 220 230 240 250 260 270 gi|557 HLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTPATAAAYS 280 290 300 310 320 330 >>gi|75070340|sp|Q5NVN8.1|FOX1_PONAB Fox-1 homolog (Atax (382 aa) initn: 1173 init1: 1149 opt: 1754 Z-score: 1707.9 bits: 324.4 E(): 1.7e-86 Smith-Waterman score: 1754; 99.620% identity (99.620% similar) in 263 aa overlap (43-304:1-263) 20 30 40 50 60 70 hh0072 SFLDRTQHSDIKADCNTCVEIEDRKVSRQQMNCEREQLRGNQEAAAAPDTMAQPYASAQF :::::::::::::::::::::::::::::: gi|750 MNCEREQLRGNQEAAAAPDTMAQPYASAQF 10 20 30 80 90 100 110 120 130 hh0072 APPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 APPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTAT 40 50 60 70 80 90 140 150 160 170 180 190 hh0072 -TDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 QTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 100 110 120 130 140 150 200 210 220 230 240 250 hh0072 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWK 160 170 180 190 200 210 260 270 280 290 300 hh0072 LNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATA ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|750 LNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATAAAAYRGA 220 230 240 250 260 270 gi|750 HLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTPATAAAYS 280 290 300 310 320 330 >>gi|166897979|sp|Q9NWB1.2|FOX1_HUMAN Fox-1 homolog (Ata (397 aa) initn: 1173 init1: 1149 opt: 1754 Z-score: 1707.6 bits: 324.4 E(): 1.8e-86 Smith-Waterman score: 1754; 99.620% identity (99.620% similar) in 263 aa overlap (43-304:1-263) 20 30 40 50 60 70 hh0072 SFLDRTQHSDIKADCNTCVEIEDRKVSRQQMNCEREQLRGNQEAAAAPDTMAQPYASAQF :::::::::::::::::::::::::::::: gi|166 MNCEREQLRGNQEAAAAPDTMAQPYASAQF 10 20 30 80 90 100 110 120 130 hh0072 APPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 APPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTAT 40 50 60 70 80 90 140 150 160 170 180 190 hh0072 -TDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 QTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 100 110 120 130 140 150 200 210 220 230 240 250 hh0072 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWK 160 170 180 190 200 210 260 270 280 290 300 hh0072 LNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATA ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 LNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATAAAAYRGA 220 230 240 250 260 270 gi|166 HLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTPATAAAYS 280 290 300 310 320 330 >>gi|57997103|emb|CAD28499.2| hypothetical protein [Homo (262 aa) initn: 1168 init1: 1144 opt: 1749 Z-score: 1705.3 bits: 323.4 E(): 2.4e-86 Smith-Waterman score: 1749; 99.618% identity (99.618% similar) in 262 aa overlap (43-303:1-262) 20 30 40 50 60 70 hh0072 SFLDRTQHSDIKADCNTCVEIEDRKVSRQQMNCEREQLRGNQEAAAAPDTMAQPYASAQF :::::::::::::::::::::::::::::: gi|579 MNCEREQLRGNQEAAAAPDTMAQPYASAQF 10 20 30 80 90 100 110 120 130 hh0072 APPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 APPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTAT 40 50 60 70 80 90 140 150 160 170 180 190 hh0072 -TDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 QTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 100 110 120 130 140 150 200 210 220 230 240 250 hh0072 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWK 160 170 180 190 200 210 260 270 280 290 300 hh0072 LNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATA :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|579 LNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAAT 220 230 240 250 260 >>gi|7022046|dbj|BAA91472.1| unnamed protein product [Ho (397 aa) initn: 1168 init1: 1144 opt: 1749 Z-score: 1702.8 bits: 323.5 E(): 3.3e-86 Smith-Waterman score: 1749; 99.240% identity (99.620% similar) in 263 aa overlap (43-304:1-263) 20 30 40 50 60 70 hh0072 SFLDRTQHSDIKADCNTCVEIEDRKVSRQQMNCEREQLRGNQEAAAAPDTMAQPYASAQF :::::::::::::::::::::::::::::: gi|702 MNCEREQLRGNQEAAAAPDTMAQPYASAQF 10 20 30 80 90 100 110 120 130 hh0072 APPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|702 APPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTAT 40 50 60 70 80 90 140 150 160 170 180 190 hh0072 -TDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF .:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|702 QADDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 100 110 120 130 140 150 200 210 220 230 240 250 hh0072 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|702 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWK 160 170 180 190 200 210 260 270 280 290 300 hh0072 LNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATA ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|702 LNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATAAAAYRGA 220 230 240 250 260 270 gi|702 HLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTPATAAAYS 280 290 300 310 320 330 >>gi|149750968|ref|XP_001502609.1| PREDICTED: similar to (397 aa) initn: 1170 init1: 1146 opt: 1737 Z-score: 1691.2 bits: 321.4 E(): 1.5e-85 Smith-Waterman score: 1737; 98.479% identity (99.240% similar) in 263 aa overlap (43-304:1-263) 20 30 40 50 60 70 hh0072 SFLDRTQHSDIKADCNTCVEIEDRKVSRQQMNCEREQLRGNQEAAAAPDTMAQPYASAQF :::::::::::::::::::::::::::::: gi|149 MNCEREQLRGNQEAAAAPDTMAQPYASAQF 10 20 30 80 90 100 110 120 130 hh0072 APPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTAT ::::::::::::::::::::::::::::::::::::::::.::::: ::::::::::::: gi|149 APPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQSHSEQSAADTSAQTVSGTAT 40 50 60 70 80 90 140 150 160 170 180 190 hh0072 -TDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 QTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 100 110 120 130 140 150 200 210 220 230 240 250 hh0072 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWK 160 170 180 190 200 210 260 270 280 290 300 hh0072 LNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATA :::::::::::::::::::::::::::::::.::::::::::::::::::::: gi|149 LNPVVGAVYSPEFYAGTVLLCQANQEGSSMYTAPSSLVYTSAMPGFPYPAATAAAAYRGA 220 230 240 250 260 270 gi|149 HLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTPATAAAYS 280 290 300 310 320 330 >>gi|56122428|gb|AAV74338.1| ataxin-2 binding protein 1 (373 aa) initn: 1651 init1: 1651 opt: 1708 Z-score: 1663.5 bits: 316.2 E(): 5.2e-84 Smith-Waterman score: 1708; 97.338% identity (99.240% similar) in 263 aa overlap (43-304:1-262) 20 30 40 50 60 70 hh0072 SFLDRTQHSDIKADCNTCVEIEDRKVSRQQMNCEREQLRGNQEAAAAPDTMAQPYASAQF :::::::::::::::::::::::::::::: gi|561 MNCEREQLRGNQEAAAAPDTMAQPYASAQF 10 20 30 80 90 100 110 120 130 hh0072 APPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTAT :::::::::::::::::::::::::::::.::::::::.::::::: ::::::::::::: gi|561 APPQNGIPAEYTAPHPHPAPEYTGQTTVPDHTLNLYPPTQTHSEQS-ADTSAQTVSGTAT 40 50 60 70 80 140 150 160 170 180 190 hh0072 -TDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF ::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|561 QTDDAAPTDGQPQTQPSENTESKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 90 100 110 120 130 140 200 210 220 230 240 250 hh0072 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|561 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWK 150 160 170 180 190 200 260 270 280 290 300 hh0072 LNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATA :::::::::::.::::::::::::::::::::.:::::::::::::::::::: gi|561 LNPVVGAVYSPDFYAGTVLLCQANQEGSSMYSGPSSLVYTSAMPGFPYPAATAAAAYRGA 210 220 230 240 250 260 gi|561 HLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTPATAAAYS 270 280 290 300 310 320 >>gi|166898081|sp|Q9JJ43.3|FOX1_MOUSE Fox-1 homolog (Ata (396 aa) initn: 1651 init1: 1651 opt: 1708 Z-score: 1663.1 bits: 316.2 E(): 5.4e-84 Smith-Waterman score: 1708; 97.338% identity (99.240% similar) in 263 aa overlap (43-304:1-262) 20 30 40 50 60 70 hh0072 SFLDRTQHSDIKADCNTCVEIEDRKVSRQQMNCEREQLRGNQEAAAAPDTMAQPYASAQF :::::::::::::::::::::::::::::: gi|166 MNCEREQLRGNQEAAAAPDTMAQPYASAQF 10 20 30 80 90 100 110 120 130 hh0072 APPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSPADTSAQTVSGTAT :::::::::::::::::::::::::::::.::::::::.::::::: ::::::::::::: gi|166 APPQNGIPAEYTAPHPHPAPEYTGQTTVPDHTLNLYPPTQTHSEQS-ADTSAQTVSGTAT 40 50 60 70 80 140 150 160 170 180 190 hh0072 -TDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF ::::::::::::::::::::.:::::::::::::::::::::::::::::::::::::: gi|166 QTDDAAPTDGQPQTQPSENTESKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIF 90 100 110 120 130 140 200 210 220 230 240 250 hh0072 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|166 NERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWK 150 160 170 180 190 200 260 270 280 290 300 hh0072 LNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATA :::::::::::.::::::::::::::::::::.:::::::::::::::::::: gi|166 LNPVVGAVYSPDFYAGTVLLCQANQEGSSMYSGPSSLVYTSAMPGFPYPAATAAAAYRGA 210 220 230 240 250 260 gi|166 HLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPTPATAAAYS 270 280 290 300 310 320 304 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 05:28:51 2008 done: Tue Aug 12 05:31:28 2008 Total Scan time: 741.680 Total Display time: 0.060 Function used was FASTA [version 34.26.5 April 26, 2007]