hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/TIGRFAMs_HMM.LIB.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-06142688/chunk_1/iprscan-20080812-06142688.nocrc
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Query sequence: hh01241
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TIGR01242 26Sp45: 26S proteasome subunit P45 family      375.2   3.3e-110   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TIGR01242   1/1      24   343 ..     1   364 []   375.2 3.3e-110

Alignments of top-scoring domains:
TIGR01242: domain 1 of 1, from 24 to 343: score 375.2, E = 3.3e-110
                   *->iselkerirkLedekkllekekirLerElerlrsEierlrsPPlivg
                      i+el+  +    ++ + l + +  L+  ++ lr+E++ l      vg
     hh01241    24    IEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVG 70   

                   tVvevldddrvvVksstGPkfvVnvsafidrkeLkPGarVALnqqtlaiV
                    Vv  +d ++v Vk     kfvV v + id ++  P  rVAL +   +  
     hh01241    71 EVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLH 120  

                   dVLPtskDplvkgmEVeErPnVsYediGGLekQirEirEaVeLPLkkPeL
                    +LP + Dplv  m Ve  P+ +Ye iGGL+kQi+Ei+E++eLP+k+PeL
     hh01241   121 KILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEL 170  

                   FeevGIePPKGVLLYGPPGtGKTLLAKAvAhetnATFIrVVGSElVrKyI
                   Fe +GI  PKGVLLYGPPGtGKTLLA+AvAh t+ TFIrV GSElV+K+I
     hh01241   171 FEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFI 220  

                   GEGArLVrevFeLAkEKAPsIiFIDEiDAiAAkRvdssTsGdREVqRTlm
                   GEGAr+Vre+F +A+E APsIiF DEiD i++ R++ + +Gd EVqRT++
     hh01241   221 GEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTML 270  

                   QLLAElDGFDprgnVkviaATNRpDiLDPAiLRPGRFDRiIEVPlPdfeG
                    LL  lDGF++  n+kvi ATNR+DiLD A+LRPGR DR IE P P++e 
     hh01241   271 ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEA 320  

                   RleILkiHTrkmkLaedVdleaiAklTeGasGAdLKAictEAGmfAIRee
                   Rl+    H    +                  G  L               
     hh01241   321 RLDLCLSHYYPQAFSK---------------GSPL--------------- 340  

                   rdyVTmdDflkAVeKvl<-*
                                  v    
     hh01241   341 --------------LVY    343  

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