# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Ohh01315.fasta.nr -Q hh01315.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 hh01315, 381 aa vs /cdna2/lib/nr/nr library 2362217958 residues in 6843189 sequences statistics sampled from 60000 to 6833374 sequences Expectation_n fit: rho(ln(x))= 6.2614+/-0.000202; mu= 6.3359+/- 0.011 mean_var=127.4156+/-24.259, 0's: 30 Z-trim: 52 B-trim: 133 in 1/66 Lambda= 0.113622 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6843189) gi|62087654|dbj|BAD92274.1| chemokine (C-X3-C moti ( 381) 2590 435.4 8.5e-120 gi|6175080|sp|P78423.1|X3CL1_HUMAN Fractalkine pre ( 397) 2550 428.9 8.2e-118 gi|60828699|gb|AAX36853.1| chemokine (C-X3-C motif ( 398) 2550 428.9 8.2e-118 gi|60828785|gb|AAX36854.1| chemokine (C-X3-C motif ( 398) 2550 428.9 8.2e-118 gi|62896943|dbj|BAD96412.1| chemokine (C-X3-C moti ( 397) 2545 428.0 1.5e-117 gi|48146969|emb|CAG33707.1| CX3CL1 [Homo sapiens] ( 397) 2541 427.4 2.3e-117 gi|55728317|emb|CAH90903.1| hypothetical protein [ ( 403) 2498 420.3 3.1e-115 gi|114662761|ref|XP_510989.2| PREDICTED: chemokine ( 397) 2495 419.8 4.3e-115 gi|55729921|emb|CAH91687.1| hypothetical protein [ ( 397) 2476 416.7 3.7e-114 gi|73950357|ref|XP_544391.2| PREDICTED: similar to ( 392) 1656 282.3 1.1e-73 gi|18266784|sp|O55145.3|X3CL1_RAT Fractalkine prec ( 393) 1593 272.0 1.4e-70 gi|47718006|gb|AAH70938.1| Cx3cl1 protein [Rattus ( 393) 1579 269.7 6.7e-70 gi|6175081|sp|O35188.2|X3CL1_MOUSE Fractalkine pre ( 395) 1546 264.3 2.9e-68 gi|5305371|gb|AAD41620.1|AF071549_1 fractalkine/ne ( 395) 1546 264.3 2.9e-68 gi|26333653|dbj|BAC30544.1| unnamed protein produc ( 395) 1540 263.3 5.7e-68 gi|28894117|gb|AAO52731.1| fractalkine [Macaca nem ( 407) 1306 225.0 2e-56 gi|25987934|gb|AAN76089.1|AF449286_1 chemokine CX3 ( 408) 1280 220.7 3.9e-55 gi|62898263|dbj|BAD97071.1| chemokine (C-X3-C moti ( 170) 981 171.3 1.2e-40 gi|194675022|ref|XP_595523.4| PREDICTED: similar t ( 458) 704 126.3 1.1e-26 gi|194208631|ref|XP_001915551.1| PREDICTED: simila ( 202) 672 120.7 2.4e-25 gi|126296380|ref|XP_001373593.1| PREDICTED: simila ( 367) 623 112.9 9.5e-23 gi|149640001|ref|XP_001511373.1| PREDICTED: simila ( 389) 550 101.0 4e-19 gi|159162095|pdb|1B2T|A Chain A, Solution Structur ( 77) 525 96.2 2.2e-18 gi|10120526|pdb|1F2L|A Chain A, Crystal Structure ( 76) 520 95.4 3.8e-18 gi|2956998|emb|CAA76404.1| fractalkine/neuroactin ( 132) 510 94.0 1.7e-17 gi|116292417|gb|ABJ97544.1| chemokine (C-X3-C moti ( 54) 288 57.2 8.3e-07 gi|77552375|gb|ABA95172.1| transposon protein, put ( 946) 225 48.1 0.0082 >>gi|62087654|dbj|BAD92274.1| chemokine (C-X3-C motif) l (381 aa) initn: 2590 init1: 2590 opt: 2590 Z-score: 2305.9 bits: 435.4 E(): 8.5e-120 Smith-Waterman score: 2590; 100.000% identity (100.000% similar) in 381 aa overlap (1-381:1-381) 10 20 30 40 50 60 hh0131 PGTSLNSGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGKRAIILETRQHRLFCAD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PGTSLNSGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGKRAIILETRQHRLFCAD 10 20 30 40 50 60 70 80 90 100 110 120 hh0131 PKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGGMDESVVLEPEATGESS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 PKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGGMDESVVLEPEATGESS 70 80 90 100 110 120 130 140 150 160 170 180 hh0131 SLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGPVGTELFRVPPVSTAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 SLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGPVGTELFRVPPVSTAAT 130 140 150 160 170 180 190 200 210 220 230 240 hh0131 WQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENAPSEGQRVWGQGQSPRP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 WQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENAPSEGQRVWGQGQSPRP 190 200 210 220 230 240 250 260 270 280 290 300 hh0131 ENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSREPVASGSWTPKAEEPIH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSREPVASGSWTPKAEEPIH 250 260 270 280 290 300 310 320 330 340 350 360 hh0131 ATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMFTYQSLQGCPRKMAGEM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|620 ATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMFTYQSLQGCPRKMAGEM 310 320 330 340 350 360 370 380 hh0131 AEGLRYIPRSCGSNSYVLVPV ::::::::::::::::::::: gi|620 AEGLRYIPRSCGSNSYVLVPV 370 380 >>gi|6175080|sp|P78423.1|X3CL1_HUMAN Fractalkine precurs (397 aa) initn: 2550 init1: 2550 opt: 2550 Z-score: 2270.3 bits: 428.9 E(): 8.2e-118 Smith-Waterman score: 2550; 99.208% identity (99.472% similar) in 379 aa overlap (3-381:19-397) 10 20 30 40 hh0131 PGTSLNSGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK : : .::::::::::::::::::::::::::::::::::::: gi|617 MAPISLSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK 10 20 30 40 50 60 50 60 70 80 90 100 hh0131 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|617 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG 70 80 90 100 110 120 110 120 130 140 150 160 hh0131 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|617 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP 130 140 150 160 170 180 170 180 190 200 210 220 hh0131 VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|617 VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA 190 200 210 220 230 240 230 240 250 260 270 280 hh0131 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|617 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE 250 260 270 280 290 300 290 300 310 320 330 340 hh0131 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|617 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF 310 320 330 340 350 360 350 360 370 380 hh0131 TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV ::::::::::::::::::::::::::::::::::::: gi|617 TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV 370 380 390 >>gi|60828699|gb|AAX36853.1| chemokine (C-X3-C motif) li (398 aa) initn: 2550 init1: 2550 opt: 2550 Z-score: 2270.2 bits: 428.9 E(): 8.2e-118 Smith-Waterman score: 2550; 99.208% identity (99.472% similar) in 379 aa overlap (3-381:19-397) 10 20 30 40 hh0131 PGTSLNSGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK : : .::::::::::::::::::::::::::::::::::::: gi|608 MAPISLSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK 10 20 30 40 50 60 50 60 70 80 90 100 hh0131 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG 70 80 90 100 110 120 110 120 130 140 150 160 hh0131 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP 130 140 150 160 170 180 170 180 190 200 210 220 hh0131 VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA 190 200 210 220 230 240 230 240 250 260 270 280 hh0131 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE 250 260 270 280 290 300 290 300 310 320 330 340 hh0131 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF 310 320 330 340 350 360 350 360 370 380 hh0131 TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV ::::::::::::::::::::::::::::::::::::: gi|608 TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPVL 370 380 390 >>gi|60828785|gb|AAX36854.1| chemokine (C-X3-C motif) li (398 aa) initn: 2550 init1: 2550 opt: 2550 Z-score: 2270.2 bits: 428.9 E(): 8.2e-118 Smith-Waterman score: 2550; 99.208% identity (99.472% similar) in 379 aa overlap (3-381:19-397) 10 20 30 40 hh0131 PGTSLNSGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK : : .::::::::::::::::::::::::::::::::::::: gi|608 MAPLSLSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK 10 20 30 40 50 60 50 60 70 80 90 100 hh0131 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG 70 80 90 100 110 120 110 120 130 140 150 160 hh0131 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP 130 140 150 160 170 180 170 180 190 200 210 220 hh0131 VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA 190 200 210 220 230 240 230 240 250 260 270 280 hh0131 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE 250 260 270 280 290 300 290 300 310 320 330 340 hh0131 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|608 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF 310 320 330 340 350 360 350 360 370 380 hh0131 TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV ::::::::::::::::::::::::::::::::::::: gi|608 TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPVL 370 380 390 >>gi|62896943|dbj|BAD96412.1| chemokine (C-X3-C motif) l (397 aa) initn: 2545 init1: 2545 opt: 2545 Z-score: 2265.8 bits: 428.0 E(): 1.5e-117 Smith-Waterman score: 2545; 98.945% identity (99.472% similar) in 379 aa overlap (3-381:19-397) 10 20 30 40 hh0131 PGTSLNSGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK : : .::::::::::::::::::::::::::::::::::::: gi|628 MAPISLSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK 10 20 30 40 50 60 50 60 70 80 90 100 hh0131 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG 70 80 90 100 110 120 110 120 130 140 150 160 hh0131 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP 130 140 150 160 170 180 170 180 190 200 210 220 hh0131 VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA 190 200 210 220 230 240 230 240 250 260 270 280 hh0131 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE 250 260 270 280 290 300 290 300 310 320 330 340 hh0131 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|628 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF 310 320 330 340 350 360 350 360 370 380 hh0131 TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV :::::::::::::::::::::::::::::.::::::: gi|628 TYQSLQGCPRKMAGEMAEGLRYIPRSCGSDSYVLVPV 370 380 390 >>gi|48146969|emb|CAG33707.1| CX3CL1 [Homo sapiens] (397 aa) initn: 2541 init1: 2541 opt: 2541 Z-score: 2262.3 bits: 427.4 E(): 2.3e-117 Smith-Waterman score: 2541; 98.945% identity (99.208% similar) in 379 aa overlap (3-381:19-397) 10 20 30 40 hh0131 PGTSLNSGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK : : .::::::::::::::::::::::::::::::::::::: gi|481 MAPISLSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK 10 20 30 40 50 60 50 60 70 80 90 100 hh0131 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG 70 80 90 100 110 120 110 120 130 140 150 160 hh0131 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP ::::::::::::::::: :::::::::::::::::::::::::::::::::::::::::: gi|481 MDESVVLEPEATGESSSPEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP 130 140 150 160 170 180 170 180 190 200 210 220 hh0131 VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA 190 200 210 220 230 240 230 240 250 260 270 280 hh0131 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE 250 260 270 280 290 300 290 300 310 320 330 340 hh0131 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|481 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF 310 320 330 340 350 360 350 360 370 380 hh0131 TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV ::::::::::::::::::::::::::::::::::::: gi|481 TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV 370 380 390 >>gi|55728317|emb|CAH90903.1| hypothetical protein [Pong (403 aa) initn: 2498 init1: 2498 opt: 2498 Z-score: 2224.1 bits: 420.3 E(): 3.1e-115 Smith-Waterman score: 2498; 96.316% identity (98.684% similar) in 380 aa overlap (2-381:24-403) 10 20 30 hh0131 PGTSLNSGQHHGVTKCNITCSKMTSKIPVALLIHYQQN ::::.:::::::::::::::::::::::::::::::: gi|557 MAPISLSWLLRLATLCHLTVLLAGTSLDSGQHHGVTKCNITCSKMTSKIPVALLIHYQQN 10 20 30 40 50 60 40 50 60 70 80 90 hh0131 QASCGKRAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRT .::::::::.:::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 KASCGKRAIVLETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRT 70 80 90 100 110 120 100 110 120 130 140 150 hh0131 TPAAGGMDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPK :::::::::::::::::::::::::::::::::::::::::::: :::::::: :::: gi|557 TPAAGGMDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPMGVTGSSGTGPAPTPK 130 140 150 160 170 180 160 170 180 190 200 210 hh0131 AQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSP :::::::::::::::::::::::::::::::::.::::.::::::::: :::::::.::: gi|557 AQDGGPVGTELFRVPPVSTAATWQSSAPHQPGPGLWAEGKTSEAPSTQGPSTQASTTSSP 190 200 210 220 230 240 220 230 240 250 260 270 hh0131 APEENAPSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSE :::::.::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|557 APEENTPSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVIPVSSE 250 260 270 280 290 300 280 290 300 310 320 330 hh0131 GTPSREPVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 GTPSREPVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFC 310 320 330 340 350 360 340 350 360 370 380 hh0131 LGVAMFTYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV ::::::::::::::::::::::.:::::::::::::::::::: gi|557 LGVAMFTYQSLQGCPRKMAGEMVEGLRYIPRSCGSNSYVLVPV 370 380 390 400 >>gi|114662761|ref|XP_510989.2| PREDICTED: chemokine (C- (397 aa) initn: 2495 init1: 2495 opt: 2495 Z-score: 2221.5 bits: 419.8 E(): 4.3e-115 Smith-Waterman score: 2495; 97.625% identity (98.681% similar) in 379 aa overlap (3-381:19-397) 10 20 30 40 hh0131 PGTSLNSGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK : : .::::::::::::::::::::::::::::::::::::: gi|114 MAPISLSWLLRLATFCHLTVLLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK 10 20 30 40 50 60 50 60 70 80 90 100 hh0131 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG 70 80 90 100 110 120 110 120 130 140 150 160 hh0131 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP ::::::::::::::::::::::::::::::::::::: ::::::::: :::::::::::: gi|114 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELLTGVTGSSGTGLPPTPKAQDGGP 130 140 150 160 170 180 170 180 190 200 210 220 hh0131 VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA :::::::::::::::::::::::::::.:::::::::: ::::::::::::::::::::: gi|114 VGTELFRVPPVSTAATWQSSAPHQPGPGLWAEAKTSEARSTQDPSTQASTASSPAPEENA 190 200 210 220 230 240 230 240 250 260 270 280 hh0131 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PSESQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE 250 260 270 280 290 300 290 300 310 320 330 340 hh0131 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF 310 320 330 340 350 360 350 360 370 380 hh0131 TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV ::::::::::::::::.:::::::::::::::::::: gi|114 TYQSLQGCPRKMAGEMVEGLRYIPRSCGSNSYVLVPV 370 380 390 >>gi|55729921|emb|CAH91687.1| hypothetical protein [Pong (397 aa) initn: 2476 init1: 2476 opt: 2476 Z-score: 2204.7 bits: 416.7 E(): 3.7e-114 Smith-Waterman score: 2476; 95.515% identity (98.417% similar) in 379 aa overlap (3-381:19-397) 10 20 30 40 hh0131 PGTSLNSGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK : : .:::::::.:::::::::::::::::::::::.::::: gi|557 MAPISLSWLLRLATLCHPTVLLAGQHHGVTRCNITCSKMTSKIPVALLIHYQQNKASCGK 10 20 30 40 50 60 50 60 70 80 90 100 hh0131 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 RAIVLETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG 70 80 90 100 110 120 110 120 130 140 150 160 hh0131 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP :::::::::::::::::::::::::::::::::::::: :::::::: : :::::::::: gi|557 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPMGVTGSSGTGLAPTPKAQDGGP 130 140 150 160 170 180 170 180 190 200 210 220 hh0131 VGTELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAPEENA :::::::::::::::::::::::::::.::::.::::::::: ::.::::.::::::::. gi|557 VGTELFRVPPVSTAATWQSSAPHQPGPGLWAEGKTSEAPSTQGPSSQASTTSSPAPEENT 190 200 210 220 230 240 230 240 250 260 270 280 hh0131 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGTPSRE ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|557 PSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVIPVSSEGTPSRE 250 260 270 280 290 300 290 300 310 320 330 340 hh0131 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|557 PVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLGVAMF 310 320 330 340 350 360 350 360 370 380 hh0131 TYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV ::::::::::::::::.:::::::::::::::::::: gi|557 TYQSLQGCPRKMAGEMVEGLRYIPRSCGSNSYVLVPV 370 380 390 >>gi|73950357|ref|XP_544391.2| PREDICTED: similar to che (392 aa) initn: 1577 init1: 686 opt: 1656 Z-score: 1478.3 bits: 282.3 E(): 1.1e-73 Smith-Waterman score: 1656; 65.796% identity (83.290% similar) in 383 aa overlap (3-381:19-392) 10 20 30 40 hh0131 PGTSLNSGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGK :.: .::: :: :::.:: ::::.::::::.:::.:: :::: gi|739 MAPPPLSWLLRLAALCHLTALLAGQHLGVKKCNVTCHKMTSEIPVALLVHYQRNQESCGK 10 20 30 40 50 60 50 60 70 80 90 100 hh0131 RAIILETRQHRLFCADPKEQWVKDAMQHLDRQAAALTRNGGTFEKQIGEVKPRTTPAAGG ::::.:.:.:.:::::::.::. :. ::..: :. ::::::::::: .::::::. : gi|739 PAIILKTKQNRIFCADPKERWVQKAIAHLEHQIAVTIRNGGTFEKQIGVGEPRTTPATRG 70 80 90 100 110 120 110 120 130 140 150 160 hh0131 MDESVVLEPEATGESSSLEPTPSSQEAQRALGTSPELPTGVTGSSGTRLPPTPKAQDGGP ::.:.: ::..: :.:. :::::: :::::: :::. : :::.: : :: :::: gi|739 MDRSAVTEPKSTQENSG-------QEAQRASGTSPELSTGVADSRGTRFPSTSKAPDGGP 130 140 150 160 170 170 180 190 200 210 220 hh0131 -VG---TELFRVPPVSTAATWQSSAPHQPGPSLWAEAKTSEAPSTQDPSTQASTASSPAP .: ::.: . ...... :::: ..:: .::.:.:.::::::: ::::::....: gi|739 PAGSQKTEFFSAATLTATTSQQSSAAYKPGSGLWTEGKASEAPSTQTPSTQASSTQAPPT 180 190 200 210 220 230 230 240 250 260 270 280 hh0131 EENAPSEGQRVWGQGQSPRPENSLEREEMGPVPAHTDAFQDWGPGSMAHVSVVPVSSEGT .. . ::. :: .:..: ::::: .::. . :: :::. :: :.:.: ::: :. gi|739 QNRVDPEGRPVWIKGDNPTPENSLGPKEMSSLSAHMDAFR--GPDHTPHLSTVLVSSPGV 240 250 260 270 280 290 290 300 310 320 330 340 hh0131 PSREPVASGSWTPKAEEPIHATMDPQRLGVLITPVPDAQAATRRQAVGLLAFLGLLFCLG :::::::::::. :::::::::.::::::.:::::::.:::::::::::::::::::::: gi|739 PSREPVASGSWVSKAEEPIHATVDPQRLGILITPVPDSQAATRRQAVGLLAFLGLLFCLG 300 310 320 330 340 350 350 360 370 380 hh0131 VAMFTYQSLQGCPRKMAGEMAEGLRYIPRSCGSNSYVLVPV ::::.::::::: :::::.:.:::::.:::::::::::::: gi|739 VAMFAYQSLQGCSRKMAGDMVEGLRYVPRSCGSNSYVLVPV 360 370 380 390 381 residues in 1 query sequences 2362217958 residues in 6843189 library sequences Tcomplib [34.26] (8 proc) start: Tue Aug 12 06:17:29 2008 done: Tue Aug 12 06:19:57 2008 Total Scan time: 810.280 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]