hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080812/iprscan-20080812-06195818/chunk_1/iprscan-20080812-06195818.nocrc
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Query sequence: hh01315
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00199                                                  75.7    5.6e-18   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00199    1/1      13    73 ..     1    65 []    75.7  5.6e-18

Alignments of top-scoring domains:
SM00199: domain 1 of 1, from 13 to 73: score 75.7, E = 5.6e-18
                   *->plrC..vClsytsiqkkIplkriklsyyritsssCpkpaVIFttKKk
                       ++C+ +C ++t   +kIp+++++ +y++ +  sC k+a+I  t ++
     hh01315    13    VTKCniTCSKMT---SKIPVALLI-HYQQ-NQASCGKRAIILET-RQ 53   

                   GrevCaDPkakWVQdyikkL<-*
                   +r +CaDPk++WV+d++++L   
     hh01315    54 HRLFCADPKEQWVKDAMQHL    73   

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