hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080812/iprscan-20080812-06444577/chunk_1/iprscan-20080812-06444577.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: hh01833 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF02210.14.ls Laminin G domain 470.3 2.2e-138 5 PF02210.14.fs Laminin G domain 463.6 2.3e-136 5 PF06008.4.ls Laminin Domain I 355.5 8.1e-104 1 PF06008.4.fs Laminin Domain I 353.5 3.1e-103 1 PF00054.13.fs Laminin G domain 187.7 1.5e-53 5 PF00054.13.ls Laminin G domain 185.5 1.2e-52 4 PF06009.3.fs Laminin Domain II 183.4 5.3e-52 2 PF06009.3.ls Laminin Domain II 174.6 2.2e-49 1 PF00053.14.ls Laminin EGF-like (Domains III and V) 157.4 3.4e-44 3 PF00053.14.fs Laminin EGF-like (Domains III and V) 153.0 1.1e-43 3 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00053.14.fs 1/3 111 158 .. 1 59 [] 44.5 3.1e-12 PF00053.14.ls 1/3 111 158 .. 1 59 [] 46.3 9.3e-11 PF00053.14.ls 2/3 161 213 .. 1 59 [] 41.2 3.4e-09 PF00053.14.fs 2/3 161 213 .. 1 59 [] 39.3 1e-10 PF00053.14.fs 3/3 216 267 .. 1 59 [] 69.2 2.1e-19 PF00053.14.ls 3/3 216 270 .. 1 59 [] 69.9 7.5e-18 PF06008.4.fs 1/1 324 584 .. 1 274 [] 353.5 3.1e-103 PF06008.4.ls 1/1 324 584 .. 1 274 [] 355.5 8.1e-104 PF06009.3.ls 1/1 763 890 .. 1 144 [] 174.6 2.2e-49 PF06009.3.fs 2/2 763 890 .. 1 144 [] 172.7 8.3e-49 PF02210.14.fs 1/5 904 1043 .. 3 141 .] 34.9 7.7e-10 PF02210.14.ls 1/5 904 1043 .. 1 141 [] 34.3 3.9e-07 PF00054.13.fs 2/5 1108 1242 .. 1 159 [] 30.4 2.2e-08 PF00054.13.ls 1/4 1108 1242 .. 1 159 [] 32.3 1.6e-06 PF02210.14.ls 2/5 1108 1239 .. 1 141 [] 99.6 8.8e-27 PF02210.14.fs 2/5 1108 1239 .. 1 141 [] 97.7 3.7e-28 PF02210.14.ls 3/5 1292 1408 .. 1 141 [] 77.7 3.5e-20 PF02210.14.fs 3/5 1292 1408 .. 1 141 [] 75.9 8.6e-22 PF02210.14.fs 4/5 1528 1655 .. 1 141 [] 134.6 6.4e-39 PF00054.13.fs 4/5 1528 1658 .. 1 159 [] 81.8 4e-23 PF00054.13.ls 3/4 1528 1658 .. 1 159 [] 83.6 5.6e-22 PF02210.14.ls 4/5 1528 1655 .. 1 141 [] 136.4 7e-38 PF02210.14.fs 5/5 1705 1830 .. 1 141 [] 120.5 8.4e-35 PF02210.14.ls 5/5 1705 1830 .. 1 141 [] 122.3 1.3e-33 PF00054.13.fs 5/5 1705 1833 .. 1 159 [] 54.2 3.4e-15 PF00054.13.ls 4/4 1705 1833 .. 1 159 [] 56.0 1.1e-13 Alignments of top-scoring domains: PF00053.14.fs: domain 1 of 3, from 111 to 158: score 44.5, E = 3.1e-12 *->CdCnphGslsddtCdsddelfgeetGqClkCkpnvtGrrCdrCkpGy CdCn+++ +C +G C+ C+ n+tG++C+ C++Gy hh01833 111 CDCNGNS----NECLD-------GSGYCVHCQRNTTGEHCEKCLDGY 146 yglpsgdpgqgC<-* g++ ++ +q C hh01833 147 IGDSIRGAPQFC 158 PF00053.14.ls: domain 1 of 3, from 111 to 158: score 46.3, E = 9.3e-11 *->CdCnphGslsddtCdsddelfgeetGqClkCkpnvtGrrCdrCkpGy CdCn+++ +C +G C+ C+ n+tG++C+ C++Gy hh01833 111 CDCNGNS----NECLD-------GSGYCVHCQRNTTGEHCEKCLDGY 146 yglpsgdpgqgC<-* g++ ++ +q C hh01833 147 IGDSIRGAPQFC 158 PF00053.14.ls: domain 2 of 3, from 161 to 213: score 41.2, E = 3.4e-09 *->CdCnphGslsd.dtCdsddelfgeetGqClkCkpnvtGrrCdrCkpG C C++ ++ ++C++ ++ +C C +n++G++C+rC+pG hh01833 161 CPCPLPHLANFaESCYRKNG-----AVRCI-CNENYAGPNCERCAPG 201 yyglpsgdpgqgC<-* yyg+p+ g C hh01833 202 YYGNPL-LIGSTC 213 PF00053.14.fs: domain 2 of 3, from 161 to 213: score 39.3, E = 1e-10 *->CdCnphGslsd.dtCdsddelfgeetGqClkCkpnvtGrrCdrCkpG C C++ ++ ++C++ ++ +C C +n++G++C+rC+pG hh01833 161 CPCPLPHLANFaESCYRKNG-----AVRCI-CNENYAGPNCERCAPG 201 yyglpsgdpgqgC<-* yyg+p+ g C hh01833 202 YYGNPL-LIGSTC 213 PF00053.14.fs: domain 3 of 3, from 216 to 267: score 69.2, E = 2.1e-19 *->CdCnphGslsd..dtCdsddelfgeetGqClkCkpnvtGrrCdrCkp CdC+++++++ ++Cd +tGqC++C+ n+tG +C+rC+p hh01833 216 CDCSGNSDPNLifEDCDE-------VTGQCRNCLRNTTGFKCERCAP 255 GyyglpsgdpgqgC<-* Gyyg+++ +C hh01833 256 GYYGDAR-IAK-NC 267 PF00053.14.ls: domain 3 of 3, from 216 to 270: score 69.9, E = 7.5e-18 *->CdCnphGslsd..dtCdsddelfgeetGqClkCkpnvtGrrCdrCkp CdC+++++++ ++Cd +tGqC++C+ n+tG +C+rC+p hh01833 216 CDCSGNSDPNLifEDCDE-------VTGQCRNCLRNTTGFKCERCAP 255 Gyyglpsg..dpgqgC<-* Gyyg++++ ++ + C hh01833 256 GYYGDARIakNCA-VC 270 PF06008.4.fs: domain 1 of 1, from 324 to 584: score 353.5, E = 3.1e-103 *->qLdevGDAllslNslTGalpapykilanienltqqLserlskisatk + ++ +ls++s+++a++++++i+a+i+ l+++Lser+++++ +k hh01833 324 K--SG---VLSVSSGAAAHRHVNEINATIYLLKTKLSERENQYALRK 365 rqledlEkalskLaqdaenLqkkankalakaqkvnaeiertlghAkqLae +q++++E+++++L++d+e+L++k+n+a++k+q v++e+++t++hA+qL+e hh01833 366 IQINNAENTMKSLLSDVEELVEKENQASRKGQLVQKESMDTINHASQLVE 415 aikklrdnikeileklaglgeTlanaealpssaLsrmlaeAqrmLeeiRe +++++rd+i+ei++k+ ++ge +++l+++++s++l+ Aq+mLeeiR+ hh01833 416 QAHDMRDKIQEINNKMLYYGE----EHELSPKEISEKLVLAQKMLEEIRS 461 RddmfqkqleeAeaelkaAeeLLsrvqtwfqklqeenegLfealkddLne R ++f++q+e +++e+++A+eLLs++++w q+l++e+++Lf+++ ++L++ hh01833 462 R-QPFFTQRELVDEEADEAYELLSQAESW-QRLHNETRTLFPVVLEQLDD 509 yeakLsDlrelldeAqakDtrdAerlnlanqkrlreieekkeeveelknq y+akLsDl+e+ld+A + +rdAe++n+a+++r+r++e+++e+v+e++++ hh01833 510 YNAKLSDLQEALDQALNY-VRDAEDMNRATAARQRDHEKQQERVREQMEV 558 ieetLatgrdsLdqanlElLqemdqal<-* ++++L+t++dsL++++l +L+e+d+++ hh01833 559 VNMSLSTSADSLTTPRL-TLSELDDII 584 PF06008.4.ls: domain 1 of 1, from 324 to 584: score 355.5, E = 8.1e-104 *->qLdevGDAllslNslTGalpapykilanienltqqLserlskisatk + ++ +ls++s+++a++++++i+a+i+ l+++Lser+++++ +k hh01833 324 K--SG---VLSVSSGAAAHRHVNEINATIYLLKTKLSERENQYALRK 365 rqledlEkalskLaqdaenLqkkankalakaqkvnaeiertlghAkqLae +q++++E+++++L++d+e+L++k+n+a++k+q v++e+++t++hA+qL+e hh01833 366 IQINNAENTMKSLLSDVEELVEKENQASRKGQLVQKESMDTINHASQLVE 415 aikklrdnikeileklaglgeTlanaealpssaLsrmlaeAqrmLeeiRe +++++rd+i+ei++k+ ++ge +++l+++++s++l+ Aq+mLeeiR+ hh01833 416 QAHDMRDKIQEINNKMLYYGE----EHELSPKEISEKLVLAQKMLEEIRS 461 RddmfqkqleeAeaelkaAeeLLsrvqtwfqklqeenegLfealkddLne R ++f++q+e +++e+++A+eLLs++++w q+l++e+++Lf+++ ++L++ hh01833 462 R-QPFFTQRELVDEEADEAYELLSQAESW-QRLHNETRTLFPVVLEQLDD 509 yeakLsDlrelldeAqakDtrdAerlnlanqkrlreieekkeeveelknq y+akLsDl+e+ld+A + +rdAe++n+a+++r+r++e+++e+v+e++++ hh01833 510 YNAKLSDLQEALDQALNY-VRDAEDMNRATAARQRDHEKQQERVREQMEV 558 ieetLatgrdsLdqanlElLqemdqal<-* ++++L+t++dsL++++l +L+e+d+++ hh01833 559 VNMSLSTSADSLTTPRL-TLSELDDII 584 PF06009.3.ls: domain 1 of 1, from 763 to 890: score 174.6, E = 2.2e-49 *->sKemAdeAnetaaaVlkelepiqtnvsnikaslsklngdleetnklv s+ +eAn t+ +V++ ++p+++n+ n++++l+ ++++ hh01833 763 SRLITEEANRTTMEVQQATAPMANNLTNWSQNLQHFDSS-------- 801 sdpsankaiddArrsvrklnklapyLldkLkpleklsvasqsrtdslsrn ++n+a+ +Ar++vr+l++++p+Lld+L+++e++++as+ +s++ hh01833 802 ---AYNTAVNSARDAVRNLTEVVPQLLDQLRTVEQKRPASN-----VSAS 843 isriKelIaqARkaAnkIkVsvnfdGdsglelrppisltdlaaltsl<-* i+ri+elIaq+R++A+kI+Vs++fdG+s++e+++ +s +dl+a+tsl hh01833 844 IQRIRELIAQTRSVASKIQVSMMFDGQSAVEVHSRTSMDDLKAFTSL 890 PF06009.3.fs: domain 2 of 2, from 763 to 890: score 172.7, E = 8.3e-49 *->sKemAdeAnetaaaVlkelepiqtnvsnikaslsklngdleetnklv s+ +eAn t+ +V++ ++p+++n+ n++++l+ ++++ hh01833 763 SRLITEEANRTTMEVQQATAPMANNLTNWSQNLQHFDSS-------- 801 sdpsankaiddArrsvrklnklapyLldkLkpleklsvasqsrtdslsrn ++n+a+ +Ar++vr+l++++p+Lld+L+++e++++as+ +s++ hh01833 802 ---AYNTAVNSARDAVRNLTEVVPQLLDQLRTVEQKRPASN-----VSAS 843 isriKelIaqARkaAnkIkVsvnfdGdsglelrppisltdlaaltsl<-* i+ri+elIaq+R++A+kI+Vs++fdG+s++e+++ +s +dl+a+tsl hh01833 844 IQRIRELIAQTRSVASKIQVSMMFDGQSAVEVHSRTSMDDLKAFTSL 890 PF02210.14.fs: domain 1 of 5, from 904 to 1043: score 34.9, E = 7.7e-10 *->TatqpnGlLlyaggk.glpdradpksdKflaLeLvdGrlvlrydlGs T + ++ ++ly+g+k+ k++ ++ L +++ lv++y+lG+ hh01833 904 T-ETADQFILYLGSKnA-------KKE-YMGLAIKNDNLVYVYNLGT 941 gg.vlltsg.pln..DGqWHtVsverngrs..vtLsVDgg.vv.g.spgs ++ + ++++p+++ V++er g++++v L+V ++ ++ + hh01833 942 KDvEIPLDSkPVSswPAYFSIVKIERVGKHgkVFLTVPSLsSTaEeKFIK 991 sdtl.......slnlngp.lylGGlpesskssllrliaaqnlvtvs.gFv + + +++++ l+++ +y+GG+p + k++ ++ +gFv hh01833 992 KGEFsgddsllDLDPEDTvFYVGGVPSNFKLPTSLN---------LpGFV 1032 GCirnvringe<-* GC++ ++n+ hh01833 1033 GCLELATLNND 1043 PF02210.14.ls: domain 1 of 5, from 904 to 1043: score 34.3, E = 3.9e-07 *->FRTatqpnGlLlyaggk.glpdradpksdKflaLeLvdGrlvlrydl T + ++ ++ly+g+k+ k++ ++ L +++ lv++y+l hh01833 904 --T-ETADQFILYLGSKnA-------KKE-YMGLAIKNDNLVYVYNL 939 Gsgg.vlltsg.pln..DGqWHtVsverngrs..vtLsVDgg.vv.g.sp G+++ + ++++p+++ V++er g++++v L+V ++ ++ hh01833 940 GTKDvEIPLDSkPVSswPAYFSIVKIERVGKHgkVFLTVPSLsSTaEeKF 989 gssdtl.......slnlngp.lylGGlpesskssllrliaaqnlvtvs.g ++ + +++++ l+++ +y+GG+p + k++ ++ +g hh01833 990 IKKGEFsgddsllDLDPEDTvFYVGGVPSNFKLPTSLN---------LpG 1030 FvGCirnvringe<-* FvGC++ ++n+ hh01833 1031 FVGCLELATLNND 1043 PF00054.13.fs: domain 2 of 5, from 1108 to 1242: score 30.4, E = 2.2e-08 *->FRTtepsGlLllgYnGtqterrskkeigdDFlaleLvdGrlevsydl +RT + +Gl+ll nG+ +r le+++G l+v yd+ hh01833 1108 VRTPADNGLILLMVNGSMFFR------------LEMRNGYLHVFYDF 1142 G.sg.rlrpavvrsgdkvlnDGkWHsvelerngrsgtLsVdgearskktL G sg+ + ++ +nD k+H +++ +++++ ++ V +++ hh01833 1143 GfSGgPVHLEDTLKKAQ-INDAKYHEISIIYHNDKKMILVVDRRH----- 1186 gGsvvtgesplgattesttLdvdgkLyvGGlPel..dqavkarrlaisps +++ ++e+ +++++ +y+GG+P + + ++ +l+ hh01833 1187 ---------VKSMDNEKMKIPFTD-IYIGGAPPEilQSRALRAHLPLDIN 1226 fkGCirdviingkpld<-* f+GC++ + +k + hh01833 1227 FRGCMKGFQFQKKDFN 1242 PF00054.13.ls: domain 1 of 4, from 1108 to 1242: score 32.3, E = 1.6e-06 *->FRTtepsGlLllgYnGtqterrskkeigdDFlaleLvdGrlevsydl +RT + +Gl+ll nG+ +r le+++G l+v yd+ hh01833 1108 VRTPADNGLILLMVNGSMFFR------------LEMRNGYLHVFYDF 1142 G.sg.rlrpavvrsgdkvlnDGkWHsvelerngrsgtLsVdgearskktL G sg+ + ++ +nD k+H +++ +++++ ++ V +++ hh01833 1143 GfSGgPVHLEDTLKKAQ-INDAKYHEISIIYHNDKKMILVVDRRH----- 1186 gGsvvtgesplgattesttLdvdgkLyvGGlPel..dqavkarrlaisps +++ ++e+ +++++ +y+GG+P + + ++ +l+ hh01833 1187 ---------VKSMDNEKMKIPFTD-IYIGGAPPEilQSRALRAHLPLDIN 1226 fkGCirdviingkpld<-* f+GC++ + +k + hh01833 1227 FRGCMKGFQFQKKDFN 1242 PF02210.14.ls: domain 2 of 5, from 1108 to 1239: score 99.6, E = 8.8e-27 *->FRTatqpnGlLlyaggk.glpdradpksdKflaLeLvdGrlvlrydl +RT ++nGl+l + +++ f+ Le+++G+l++ yd+ hh01833 1108 VRT-PADNGLILLMVNGsM-----------FFRLEMRNGYLHVFYDF 1142 G.sgg.vlltsg.p...lnDGqWHtVsverngrs.vtLsVDgg.vv.g.s G sgg+v+l ++ ++ ++nD + H +s+++++ +++ L+VD ++v ++++ hh01833 1143 GfSGGpVHLEDTlKkaqINDAKYHEISIIYHNDKkMILVVDRRhVKsMdN 1192 pgssdtlslnlngp.lylGGlpesskssllrliaaqnlvtvs.gFvGCir +++++ ++y+GG+p++ +s+ ++++ + +F+GC++ hh01833 1193 E------KMKIPFTdIYIGGAPPEILQSRALRAHLPL----DiNFRGCMK 1232 nvringe<-* ++++ + hh01833 1233 GFQFQKK 1239 PF02210.14.fs: domain 2 of 5, from 1108 to 1239: score 97.7, E = 3.7e-28 *->FRTatqpnGlLlyaggk.glpdradpksdKflaLeLvdGrlvlrydl +RT ++nGl+l + +++ f+ Le+++G+l++ yd+ hh01833 1108 VRT-PADNGLILLMVNGsM-----------FFRLEMRNGYLHVFYDF 1142 G.sgg.vlltsg.p...lnDGqWHtVsverngrs.vtLsVDgg.vv.g.s G sgg+v+l ++ ++ ++nD + H +s+++++ +++ L+VD ++v ++++ hh01833 1143 GfSGGpVHLEDTlKkaqINDAKYHEISIIYHNDKkMILVVDRRhVKsMdN 1192 pgssdtlslnlngp.lylGGlpesskssllrliaaqnlvtvs.gFvGCir +++++ ++y+GG+p++ +s+ ++++ + +F+GC++ hh01833 1193 E------KMKIPFTdIYIGGAPPEILQSRALRAHLPL----DiNFRGCMK 1232 nvringe<-* ++++ + hh01833 1233 GFQFQKK 1239 PF02210.14.ls: domain 3 of 5, from 1292 to 1408: score 77.7, E = 3.5e-20 *->FRTatqpnGlLlyaggk.glpdradpksdKflaLeLvdGrlvlrydl FRT qpnGlL+y +++++ ++++L +G++ + + hh01833 1292 FRT-LQPNGLLFYYASGsD-----------VFSISLDNGTVIMDV-- 1324 Gsgg.vlltsg.plnDGqWHtVsverngrsvtLsVDgg.vv.g.spgssd +g + + ++++nDG H V + + ++ +L+VD+++v + +++ ++ hh01833 1325 --KGiKVQSVDkQYNDGLSHFVISSVSPTRYELIVDKSrVGsKnPTKGKI 1372 tlslnlngp.lylGGlpesskssllrliaaqnlvtvs.gFvGCirnvrin + + + ++ ++y+GG p s++ +F+GCi+n ++ hh01833 1373 E-QTQASEKkFYFGGSPISAQ---------------YaNFTGCISNAYFT 1406 ge<-* + hh01833 1407 RV 1408 PF02210.14.fs: domain 3 of 5, from 1292 to 1408: score 75.9, E = 8.6e-22 *->FRTatqpnGlLlyaggk.glpdradpksdKflaLeLvdGrlvlrydl FRT qpnGlL+y +++++ ++++L +G++ + + hh01833 1292 FRT-LQPNGLLFYYASGsD-----------VFSISLDNGTVIMDV-- 1324 Gsgg.vlltsg.plnDGqWHtVsverngrsvtLsVDgg.vv.g.spgssd +g + + ++++nDG H V + + ++ +L+VD+++v + +++ ++ hh01833 1325 --KGiKVQSVDkQYNDGLSHFVISSVSPTRYELIVDKSrVGsKnPTKGKI 1372 tlslnlngp.lylGGlpesskssllrliaaqnlvtvs.gFvGCirnvrin + + + ++ ++y+GG p s++ +F+GCi+n ++ hh01833 1373 E-QTQASEKkFYFGGSPISAQ---------------YaNFTGCISNAYFT 1406 ge<-* + hh01833 1407 RV 1408 PF02210.14.fs: domain 4 of 5, from 1528 to 1655: score 134.6, E = 6.4e-39 *->FRTatqpnGlLlyaggk.glpdradpksdKflaLeLvdGrlvlrydl +RT ++++G+++y+++++ +d f++L+L +Grlv+ ++ hh01833 1528 LRT-RSSHGMIFYVSDQeE--------ND-FMTLFLAHGRLVYMFNV 1564 Gsgg.vlltsg.plnDGqWHtVsverngrsvtLsVDgg.vv.g.spgssd G ++ ++s++++nDG WH+V ++r+++s++L++Dg +v ++++p+ + hh01833 1565 G-HKkLKIRSQeKYNDGLWHDVIFIRERSSGRLVIDGLrVLeEsLPPTEA 1613 tlslnlngplylGGlpesskssllrliaaqnlvtvs.gFvGCirnvring + +++gp+ylGG+ ++ +++++ + +F GC++n+++ng hh01833 1614 --TWKIKGPIYLGGVAPGKAVKNVQINS-------IySFSGCLSNLQLNG 1654 e<-* hh01833 1655 A 1655 PF00054.13.fs: domain 4 of 5, from 1528 to 1658: score 81.8, E = 4e-23 *->FRTtepsGlLllgYnGtqterrskkeigdDFlaleLvdGrlevsydl RT+++ G+++ Y +q+e DF+ l L +Grl +++++ hh01833 1528 LRTRSSHGMIF--YVSDQEEN--------DFMTLFLAHGRLVYMFNV 1564 GsgrlrpavvrsgdkvlnDGkWHsvelerngrsgtLsVdgearskktLgG G++ + +rs +k nDG WH v r+++sg L +dg + hh01833 1565 GHK---KLKIRSQEK-YNDGLWHDVIFIRERSSGRLVIDGLR-------- 1602 svvtgesplgattesttLdvdgkLyvGG.lPeldqavkarrlaispsfkG v es +++ t + +g++y+GG +P +avk+ + ++ +sf+G hh01833 1603 --VLEESLPPTEA---TWKIKGPIYLGGvAP--GKAVKNVQINSIYSFSG 1645 Cirdviingkpld<-* C+ ++ +ng + hh01833 1646 CLSNLQLNGASIT 1658 PF00054.13.ls: domain 3 of 4, from 1528 to 1658: score 83.6, E = 5.6e-22 *->FRTtepsGlLllgYnGtqterrskkeigdDFlaleLvdGrlevsydl RT+++ G+++ Y +q+e DF+ l L +Grl +++++ hh01833 1528 LRTRSSHGMIF--YVSDQEEN--------DFMTLFLAHGRLVYMFNV 1564 GsgrlrpavvrsgdkvlnDGkWHsvelerngrsgtLsVdgearskktLgG G++ + +rs +k nDG WH v r+++sg L +dg + hh01833 1565 GHK---KLKIRSQEK-YNDGLWHDVIFIRERSSGRLVIDGLR-------- 1602 svvtgesplgattesttLdvdgkLyvGG.lPeldqavkarrlaispsfkG v es +++ t + +g++y+GG +P +avk+ + ++ +sf+G hh01833 1603 --VLEESLPPTEA---TWKIKGPIYLGGvAP--GKAVKNVQINSIYSFSG 1645 Cirdviingkpld<-* C+ ++ +ng + hh01833 1646 CLSNLQLNGASIT 1658 PF02210.14.ls: domain 4 of 5, from 1528 to 1655: score 136.4, E = 7e-38 *->FRTatqpnGlLlyaggk.glpdradpksdKflaLeLvdGrlvlrydl +RT ++++G+++y+++++ +d f++L+L +Grlv+ ++ hh01833 1528 LRT-RSSHGMIFYVSDQeE--------ND-FMTLFLAHGRLVYMFNV 1564 Gsgg.vlltsg.plnDGqWHtVsverngrsvtLsVDgg.vv.g.spgssd G ++ ++s++++nDG WH+V ++r+++s++L++Dg +v ++++p+ + hh01833 1565 G-HKkLKIRSQeKYNDGLWHDVIFIRERSSGRLVIDGLrVLeEsLPPTEA 1613 tlslnlngplylGGlpesskssllrliaaqnlvtvs.gFvGCirnvring + +++gp+ylGG+ ++ +++++ + +F GC++n+++ng hh01833 1614 --TWKIKGPIYLGGVAPGKAVKNVQINS-------IySFSGCLSNLQLNG 1654 e<-* hh01833 1655 A 1655 PF02210.14.fs: domain 5 of 5, from 1705 to 1830: score 120.5, E = 8.4e-35 *->FRTatqpnGlLlyaggk.glpdradpksdKflaLeLvdGrlvlrydl +R+ ++++G L + ++ +g + +l + +++G++ + ++ hh01833 1705 VRP-RSSSGTLVHGHSVnG---------E-YLNVHMKNGQVIVKVNN 1740 G.sgg.vlltsg.plnDGqWHtVsverngrsvtLsVDgg.vv.g.spgss G ++ ++++t++++l+DG+WH+++v+r+ + v+L VD + ++ +++ +++ hh01833 1741 GiRDFsTSVTPKqSLCDGRWHRITVIRDSNVVQLDVDSEvNHvVgPLNPK 1790 dtlslnlngplylGGlpesskssllrliaaqnlvtvs.gFvGCirnvrin + +p+++GG+pes+ +++l++ s++F+GCir ++i+ hh01833 1791 ---PIDHREPVFVGGVPESLLTPRLAP---------SkPFTGCIRHFVID 1828 ge<-* g+ hh01833 1829 GH 1830 PF02210.14.ls: domain 5 of 5, from 1705 to 1830: score 122.3, E = 1.3e-33 *->FRTatqpnGlLlyaggk.glpdradpksdKflaLeLvdGrlvlrydl +R+ ++++G L + ++ +g + +l + +++G++ + ++ hh01833 1705 VRP-RSSSGTLVHGHSVnG---------E-YLNVHMKNGQVIVKVNN 1740 G.sgg.vlltsg.plnDGqWHtVsverngrsvtLsVDgg.vv.g.spgss G ++ ++++t++++l+DG+WH+++v+r+ + v+L VD + ++ +++ +++ hh01833 1741 GiRDFsTSVTPKqSLCDGRWHRITVIRDSNVVQLDVDSEvNHvVgPLNPK 1790 dtlslnlngplylGGlpesskssllrliaaqnlvtvs.gFvGCirnvrin + +p+++GG+pes+ +++l++ s++F+GCir ++i+ hh01833 1791 ---PIDHREPVFVGGVPESLLTPRLAP---------SkPFTGCIRHFVID 1828 ge<-* g+ hh01833 1829 GH 1830 PF00054.13.fs: domain 5 of 5, from 1705 to 1833: score 54.2, E = 3.4e-15 *->FRTtepsGlLllgYnGtqterrskkeigdDFlaleLvdGrlevsydl +R +++sG L + ++++ +l + + +G++ v++++ hh01833 1705 VRPRSSSGTLV--HGHSVNGE---------YLNVHMKNGQVIVKVNN 1740 GsgrlrpavvrsgdkvlnDGkWHsvelerngrsgtLsVdgearskktLgG G + ++v++++ l+DG+WH++++ r ++L Vd e + hh01833 1741 GIR-DFSTSVTPKQS-LCDGRWHRITVIRDSNVVQLDVDSEVN------- 1781 svvtgesplgattesttLdvdgkLyvGGlPeldqavkarrlaispsfkGC ++ pl ++ +d +++++vGG P ++ + +rla s++f+GC hh01833 1782 ---HVVGPLNPKP----IDHREPVFVGGVP---ESLLTPRLAPSKPFTGC 1821 irdviingkpld<-* ir +i+g+p+ hh01833 1822 IRHFVIDGHPVS 1833 PF00054.13.ls: domain 4 of 4, from 1705 to 1833: score 56.0, E = 1.1e-13 *->FRTtepsGlLllgYnGtqterrskkeigdDFlaleLvdGrlevsydl +R +++sG L + ++++ +l + + +G++ v++++ hh01833 1705 VRPRSSSGTLV--HGHSVNGE---------YLNVHMKNGQVIVKVNN 1740 GsgrlrpavvrsgdkvlnDGkWHsvelerngrsgtLsVdgearskktLgG G + ++v++++ l+DG+WH++++ r ++L Vd e + hh01833 1741 GIR-DFSTSVTPKQS-LCDGRWHRITVIRDSNVVQLDVDSEVN------- 1781 svvtgesplgattesttLdvdgkLyvGGlPeldqavkarrlaispsfkGC ++ pl ++ +d +++++vGG P ++ + +rla s++f+GC hh01833 1782 ---HVVGPLNPKP----IDHREPVFVGGVP---ESLLTPRLAPSKPFTGC 1821 irdviingkpld<-* ir +i+g+p+ hh01833 1822 IRHFVIDGHPVS 1833 //